mRNA_H-elongata_contig10140.124.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE) HSP 1 Score: 490 bits (1261), Expect = 1.210e-162 Identity = 270/470 (57.45%), Postives = 321/470 (68.30%), Query Frame = 2 Query: 584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963 KK D R RLT+ EDQL EFIN EHK GRQ FRRT+A+W C+ E SNR GLL RLGY+R RGRIKTPPL+A+RLARIR FLVEM +AKRAEDAGLAVIVYM++SFVHQAHG PYS FP + + G + V + P L G K + K +M++ A + + +L++G D ++ + P + A P GK+ ILVLDNASYHHGF AEV+VPETNTKKHN LLR FGA++I+ + VVE++FE+PT G+SFP +EGGVSR EV ATREY+ L HPE LEERVVT+MR+ W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E GQEGGWKAADC KLV HAIGEMN W+K+RDGVLSG IG+LE P+ YD DDV VGD+E GVG I++E E Sbjct: 165 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-PAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVPPVGDVEEGVGEQIQQESAE 630
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE) HSP 1 Score: 485 bits (1249), Expect = 1.060e-160 Identity = 269/470 (57.23%), Postives = 322/470 (68.51%), Query Frame = 2 Query: 584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963 KK D R RLT+ EDQL EFIN EHK GRQ FRRT+A+W C+ E SNR GLL RLGY+R RGRIKTPPL+A+RLARIR FLV M++AKRAEDAGLAVIVYM++SFVHQAHG PYS FP + + G + V + P L G K + K +M++ A + + +L++G D ++ + P + A P GK+ ILVLDNASYHHGF +EV+VPETNTKKHN LLR FGA++I+ + VVE++FE+PT G+SFP +EGGVSR EV ATREY+ L HPE LEERVVT+MR+ W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E GQEGGWKAADC KLV HAIGEMN W+K+RDGVLSG IG+LE P+ YD DDVS VGD+E GVG I++E E Sbjct: 176 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-PAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQESAE 640
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI) HSP 1 Score: 484 bits (1246), Expect = 6.310e-160 Identity = 267/473 (56.45%), Postives = 316/473 (66.81%), Query Frame = 2 Query: 584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FP------------KTRIELCRMGSVAQRERYC-V*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGHDRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963 K+ D R RLT+ DQL EFIN EHK GRQ FRRT+A+W C+ E SNR GLL RLGY+R RGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAVIVYM++SFVHQAHG PYS FP +T + RM V ++ + C P W + GK K E + G+ + H ++ P + A P GKK ILVLDNASYHHGF AEV+VPETNTKKHN LLRKFGA++I+ K VEH+FE+P+ G+SFP +EGGVSR EV ATREY+ L +PE LEERVVT+M++ W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E GQEGGWKAA+C KLV HAIGEMN W+++RD LSG IG L+ P+ YDKDDVS VGD+E GVG I++E E Sbjct: 199 KEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNMEQP-SNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKFCDGFPIEEGWFKETGS-GKKKMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-----PAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNREGGVSRAEVATATREYIRLNYPERLEERVVTFMKKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRQGWYGDKEWSGQEGGWKAANCSKLVEHAIGEMNKWVRDRDAGLSGKIGNLQKPDGYDKDDVSPVGDVEEGVGEQIQQESAE 664
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE) HSP 1 Score: 439 bits (1128), Expect = 6.960e-145 Identity = 242/431 (56.15%), Postives = 290/431 (67.29%), Query Frame = 2 Query: 584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGV 1846 KK D R RLT+ EDQL EFIN EHK GRQ FRRT+A+W C+ E SNR GLL RLGY+R RGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAVIVYM++SFVHQAHG PYS FP + + G + V + P L G K + K +M++ A + + +L++G D ++ + P + A P GK+ ILVLDNASYHHGF AEV+VPE+NTKKHN LLR FGA++I+ + VVE++ E+PT G+SFP +EGGVSR EV ATREY+ L HPE LEERVVT+MR+ W LIWTP YMPSFQPIELFWQHGKQY SL F+LKRK++EVW QIR GWYGD GQEGGWKAA+C KLV HAIGEMN W+K+RD V Sbjct: 48 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-PAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLKFELKRKMREVWVQIRKGWYGDKAWPGQEGGWKAANCSKLVDHAIGEMNKWVKDRDEV 474
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5K024_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K024_9PHAE) HSP 1 Score: 427 bits (1099), Expect = 1.050e-139 Identity = 247/489 (50.51%), Postives = 289/489 (59.10%), Query Frame = 2 Query: 584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRERYCV*S*-----------------------------CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGHDRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963 KK D R RLT+ EDQL EFIN EHK GRQ FRRT+A+W C+ E SNR GLL RLGY+R RGRIKTPPL+A+RLARIR FLVEM +AK AEDAGL V + C P W + GK + E + + G+ + H ++ P + A P GK+ ILVLDNASYHHGF AEV+VPETNTKKHN LLR FGA++I+ + VVE++ E+PT G+SFP +EGGVSR EV ATREY+ L HPE LEERVVT+MR+ W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E GQEGGWKAADC KLV HAIGEMN W+K+RDGVLSG IG+LE P+ YD DDVS VGD+E GVG I++E E Sbjct: 48 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKGAEDAGLMVPPILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCDGLPIEEGWFKETGS-GKKEMEDEETAEFLCHFKFAKGDHHAAMTDSMFMEWLEHRLS-----PAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQESAE 529
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE) HSP 1 Score: 396 bits (1017), Expect = 2.120e-128 Identity = 224/403 (55.58%), Postives = 268/403 (66.50%), Query Frame = 2 Query: 584 KKGDKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEG 1762 KK D R RLT+ EDQL EFIN EHK GRQ FRRT+A+W C+ E SNR EGLL RLGY+ RGRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAVIVY++ SFVHQAHG PYS FP E+ + G + V + P + L G K + K +M++ A + + +L++G D ++ + P + A P GK+ ILVLDNASYHHGF AEV+VPETNTKKHN LLR FGA++I+ K VVE +FE+PT G+SFP +EGGVSR EV ATREY+ L HPE LEERVVT+MR+ LIWTP YMPSFQPIELFWQHGKQY S+NF+LKRK++EVW QIR GWYGD E GQEG Sbjct: 60 KKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNMEQP-SNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVGLPIEEGWFKETGSGKREMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLS-PAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGLALIWTPPYMPSFQPIELFWQHGKQYVSVNFELKRKVREVWVQIRKGWYGDKEWPGQEG 458
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KCN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN2_9PHAE) HSP 1 Score: 362 bits (929), Expect = 1.520e-114 Identity = 214/460 (46.52%), Postives = 274/460 (59.57%), Query Frame = 2 Query: 593 DKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FP------------KTRIELCRM---------GSVAQRERYCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRG--HD--------RFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIP 1879 D R +T+E ED L EFI GEH+ GRQ FRRT+ D + CS +SNR GLLQRLG++R RGRIK PPL+ +R RIR+FLV+MD+AKRAEDAG+AVIVY+++SFVHQAHG YS FP +T + RM G +A+ + P R W K + +M + A + + +L+ G H+ ++ H +T P F A KK LVLDNASYHH F EV+VPETN+KK+N +LLRK+G + K + G E++FE+P S PN ++ GVS++E+ TR Y P+ LEE+ TYMRE W LIWTP YMP+FQPIELFWQHGK Y S++F+ R I +VW+QIR GWYGD E GQEGGWKAA+C KLV HAIG+M+ WI G LSG IG+LE P Sbjct: 47 DGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKD--YLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGVAVIVYIDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGF--------PIREGWFKAKENRAKKIKPGEADFEMSDE--QTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLT-----PAFDAQ--FKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQG--SLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNILDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 484
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KHE7_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE7_9PHAE) HSP 1 Score: 350 bits (897), Expect = 7.550e-112 Identity = 192/363 (52.89%), Postives = 237/363 (65.29%), Query Frame = 2 Query: 905 MNQSFVHQAHGFPYS*FPKTRIELCRMGSVAQRER----YCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRGH------DRFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIPERYDKDDVSHVGDIEVGVGGLIEKEREE 1963 M++SFVHQAHG PYS FP + + G + V + P L G K + K +M++ A + + +L++G D ++ + P + A P GK+ ILVLDNASYHHGF A+V++PE+NTKKHN LLR FGA++I+ K G ++FE+PT G+SFP +EGGVSR EV ATREY+ L HPE LEERVVT+MR+ W LIWTP YMPSFQPIELFWQHGKQY SLNF+LKRK++EVW QIR GWYGD E GQEGGWKAADC KLV HAIGEMN W+K+RDGVLSG IG+LE P+ YD DDVS VGD+E GVG I++E E Sbjct: 1 MDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFKETGSGKKEMEDE--ETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLN-PAYNAIPEFKGKRMILVLDNASYHHGFDAQVKLPESNTKKHNVDLLRMFGAKSIRVK--RKEGEQGVYNFEVPTEPGSSFPAGNREGGVSRAEVATATREYIHLNHPERLEERVVTFMRKKGWALIWTPPYMPSFQPIELFWQHGKQYVSLNFELKRKMREVWVQIRKGWYGDKEWPGQEGGWKAADCSKLVDHAIGEMNKWVKDRDGVLSGTIGSLEKPDGYDTDDVSPVGDVEEGVGEQIQQESAE 358
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE) HSP 1 Score: 350 bits (897), Expect = 2.910e-108 Identity = 213/454 (46.92%), Postives = 271/454 (59.69%), Query Frame = 2 Query: 593 DKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FP------------KTRIELCRMGSV-AQRERYCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRG--HD--------RFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYK--SLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMNTWIKNRDGVLSGAIGTLEIP 1879 D R +T+E ED L EFI GEH+ GRQ FRRT+ D + CS +SNR GLLQRLG++R RGRIK PPL+ +R RIR+FLV+MD+AKRAEDAG+AVIVYM++SFVHQAHG YS FP +T + RM V A E + P R W K + +M + A + + +L+ G H+ ++ H +T P F A KK LVLDNASYHH F EV+VPETN+KK+N +LLRK+G + K + G E++FE+P S PN + G VS++E+ TR Y P+ LEE+ TYMRE W LIWTP YMP+FQPIELFWQHGK Y S++F+ R + +VW++IR GWYGD E GQE GWKAA+C KLV HAIG+M+ WI G LSG IG+LE P Sbjct: 168 DGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKD--YLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAELQEGFPIREGWFKAKENRAKKIKPGEADFEMSDE--QTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLT-----PAFDAQ--FKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQG--SLPNANRNG-VSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYHYVSIHFEKGRNVLDVWKKIRLGWYGDPEWDGQERGWKAANCGKLVQHAIGKMDEWIGLYGGNLSGTIGSLEYP 606
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Match: A0A6H5KP14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP14_9PHAE) HSP 1 Score: 342 bits (877), Expect = 6.060e-107 Identity = 203/440 (46.14%), Postives = 261/440 (59.32%), Query Frame = 2 Query: 593 DKRLRLTQEPEDQLHEFINGEHKVGRQGFRRTLADWTFTACSTETLLSNRVEEGLLQRLGYRRYRGRIKTPPLDAKRLARIRMFLVEMDIAKRAEDAGLAVIVYMNQSFVHQAHGFPYS*FP------------KTRIELCRM---------GSVAQRERYCV*S*CM*SPSRGCWLSLLRTAGKSKGERNSK*KMKNN*VSLAGEVGKRRLSRG--HD--------RFYVHGVT*APP*PGFQANPALSGKKKILVLDNASYHHGFKAEVEVPETNTKKHNAQLLRKFGARTIKAKIAAVNGAVVEHSFEMPTYHGTSFPNVRQEGGVSRKEVTLATREYLCLKHPETLEERVVTYMREAEWELIWTPSYMPSFQPIELFWQHGKQYKSLNFKLKRKIQEVWEQIR*GWYGDTE**GQEGGWKAADCLKLVAHAIGEMN 1819 D R +TQE ED L EFI GEH+ GRQ FRRT+ D + CS +SNR GLLQRLG++R RGRIK PPL+ +R RIR+FLV+MD+AK AEDAG+AVIVYM++SFVHQAHG YS FP +T + RM G +A+ + P R W K + +M + A + + +L+ G H+ ++ H +T P F A KK LVLDNASYHH F EV+VPETN+KK+N +LLRK+G + K + G E++FE+P S PN ++ GVS++E+ TR Y P+ LEE+ TYMRE W LIWTP YMP+FQPIELFWQHGK Y S++F+ R + +VW+QIR GWYGD E GQEGGWKAA+C KLV HAIG+M+ Sbjct: 91 DGRRVITQEQEDGLREFIKGEHEAGRQVFRRTVKD--YLECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKGAEDAGVAVIVYMDESFVHQAHGSAYSYFPSDDTGVVQDGIGRTTGKGLRMIMVHAITKHGPLAELQEGF--------PIREGWFKAKENRAKKIKPGEADFEMSDE--QTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLT-----PAFDAQ--FKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQG--SLPNANRKNGVSKEEIASVTRTYFKKNFPQKLEEKAETYMREKGWGLIWTPPYMPTFQPIELFWQHGKHYVSIHFEKGRNMLDVWKQIRLGWYGDPEWDGQEGGWKAANCGKLVQHAIGKMD 508 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10140.124.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10140.124.1 >prot_H-elongata_contig10140.124.1 ID=prot_H-elongata_contig10140.124.1|Name=mRNA_H-elongata_contig10140.124.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=149bp MLLFAFRKEGSSENKAVNQVLKTFKVGHEKVREVNNHWWDHRELYETNGSback to top mRNA from alignment at H-elongata_contig10140:6585..8972- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10140.124.1 ID=mRNA_H-elongata_contig10140.124.1|Name=mRNA_H-elongata_contig10140.124.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2388bp|location=Sequence derived from alignment at H-elongata_contig10140:6585..8972- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10140:6585..8972- >mRNA_H-elongata_contig10140.124.1 ID=mRNA_H-elongata_contig10140.124.1|Name=mRNA_H-elongata_contig10140.124.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=894bp|location=Sequence derived from alignment at H-elongata_contig10140:6585..8972- (Himanthalia elongata Himel1 dioecious)back to top |