mRNA_H-elongata_contig101096.99.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig101096.99.1
Unique NamemRNA_H-elongata_contig101096.99.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: A0A0U4D4N3_MELSA (Catalase n=1 Tax=Melanoplus sanguinipes TaxID=65742 RepID=A0A0U4D4N3_MELSA)

HSP 1 Score: 72.8 bits (177), Expect = 1.910e-15
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEV 126
            QD+TLID LAHFDRERIPERVVHAKGAGAFGYFEV
Sbjct:   52 QDFTLIDELAHFDRERIPERVVHAKGAGAFGYFEV 86
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BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: D7G1K9_ECTSI (Catalase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K9_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 2.240e-15
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEV 126
            QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEV
Sbjct:   49 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEV 83
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BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: A0A662YAE1_9STRA (Catalase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YAE1_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.680e-15
Identity = 35/40 (87.50%), Postives = 37/40 (92.50%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVWPHNT 141
            QD+ L+DHLAHFDRERIPERVVHAKGAGAFGYFEV  HNT
Sbjct:   37 QDFALLDHLAHFDRERIPERVVHAKGAGAFGYFEV-THNT 75
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BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: G5AI36_PHYSP (Catalase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AI36_PHYSP)

HSP 1 Score: 73.9 bits (180), Expect = 1.230e-14
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVWPHNT 141
            QD+ L+DHLAHFDRERIPERVVHAKGAGAFGYFEV  H T
Sbjct:   37 QDFALLDHLAHFDRERIPERVVHAKGAGAFGYFEV-THET 75
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BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: A0A5D6Y7E2_9STRA (Catalase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7E2_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.970e-14
Identity = 34/41 (82.93%), Postives = 35/41 (85.37%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVWPHNTL 144
            QD+ LIDHLAHFDRERIPERVVHAKGAGAFGYFEV     L
Sbjct:   36 QDFALIDHLAHFDRERIPERVVHAKGAGAFGYFEVTHSENL 76
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BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: A0A2D4C1S8_PYTIN (Catalase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1S8_PYTIN)

HSP 1 Score: 74.3 bits (181), Expect = 2.720e-14
Identity = 33/41 (80.49%), Postives = 36/41 (87.80%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVWPHNTL 144
            QD+ LIDHLAHFDRERIPERVVHAKGAGAFGYFEV   + +
Sbjct:   44 QDFALIDHLAHFDRERIPERVVHAKGAGAFGYFEVTHSDAI 84
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BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: K3X6S3_GLOUD (Catalase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X6S3_GLOUD)

HSP 1 Score: 73.9 bits (180), Expect = 3.710e-14
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEV 126
            QD+ LIDHLAHFDRERIPERVVHAKGAGAFGYFEV
Sbjct:   35 QDFALIDHLAHFDRERIPERVVHAKGAGAFGYFEV 69
[Close]
BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: G4ZJB4_PHYSP (Catalase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZJB4_PHYSP)

HSP 1 Score: 73.9 bits (180), Expect = 3.720e-14
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVWPHNT 141
            QD+ L+DHLAHFDRERIPERVVHAKGAGAFGYFEV  H T
Sbjct:  151 QDFALLDHLAHFDRERIPERVVHAKGAGAFGYFEV-THET 189
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BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: B3SC13_TRIAD (Catalase n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3SC13_TRIAD)

HSP 1 Score: 73.6 bits (179), Expect = 5.060e-14
Identity = 33/35 (94.29%), Postives = 34/35 (97.14%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEV 126
            QD TLIDH+AHFDRERIPERVVHAKGAGAFGYFEV
Sbjct:   51 QDITLIDHMAHFDRERIPERVVHAKGAGAFGYFEV 85
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BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Match: W2QRP3_PHYPN (Catalase n=12 Tax=Phytophthora TaxID=4783 RepID=W2QRP3_PHYPN)

HSP 1 Score: 73.6 bits (179), Expect = 5.060e-14
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 1 
Query:   22 QDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVWPHNT 141
            QD+ LIDHLAHFDRERIPERVVHAKGAGAFG+FEV  H+T
Sbjct:   37 QDFALIDHLAHFDRERIPERVVHAKGAGAFGFFEV-THDT 75
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101096.99.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U4D4N3_MELSA1.910e-1594.29Catalase n=1 Tax=Melanoplus sanguinipes TaxID=6574... [more]
D7G1K9_ECTSI2.240e-15100.00Catalase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A662YAE1_9STRA5.680e-1587.50Catalase n=2 Tax=Nothophytophthora sp. Chile5 TaxI... [more]
G5AI36_PHYSP1.230e-1485.00Catalase domain-containing protein n=1 Tax=Phytoph... [more]
A0A5D6Y7E2_9STRA1.970e-1482.93Catalase n=1 Tax=Pythium brassicum TaxID=1485010 R... [more]
A0A2D4C1S8_PYTIN2.720e-1480.49Catalase n=2 Tax=Pythium insidiosum TaxID=114742 R... [more]
K3X6S3_GLOUD3.710e-1494.29Catalase n=1 Tax=Globisporangium ultimum (strain A... [more]
G4ZJB4_PHYSP3.720e-1485.00Catalase n=1 Tax=Phytophthora sojae (strain P6497)... [more]
B3SC13_TRIAD5.060e-1494.29Catalase n=1 Tax=Trichoplax adhaerens TaxID=10228 ... [more]
W2QRP3_PHYPN5.060e-1485.00Catalase n=12 Tax=Phytophthora TaxID=4783 RepID=W2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101096contigH-elongata_contig101096:2103..2249 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score75.9
Seed ortholog evalue6e-12
Seed eggNOG ortholog4792.ETI55580
Preferred nameCAT
KEGG rclassRC00034,RC00767,RC02141,RC02755
KEGG koko:K03781
KEGG ReactionR00009,R00602,R02670
KEGG Pathwayko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014
KEGG ModuleM00532
GOsGO:0000166,GO:0000302,GO:0000323,GO:0001101,GO:0001655,GO:0001657,GO:0001666,GO:0001775,GO:0001822,GO:0001823,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0003007,GO:0003674,GO:0003824,GO:0004046,GO:0004096,GO:0004601,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005764,GO:0005773,GO:0005777,GO:0005778,GO:0005782,GO:0005783,GO:0005794,GO:0005829,GO:0005886,GO:0006066,GO:0006091,GO:0006355,GO:0006605,GO:0006625,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006807,GO:0006810,GO:0006886,GO:0006887,GO:0006950,GO:0006955,GO:0006979,GO:0006996,GO:0007031,GO:0007154,GO:0007267,GO:0007275,GO:0007507,GO:0007568,GO:0007584,GO:0008104,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008340,GO:0009056,GO:0009060,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009636,GO:0009642,GO:0009650,GO:0009653,GO:0009719,GO:0009725,GO:0009743,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010193,GO:0010243,GO:0010259,GO:0010288,GO:0010468,GO:0010556,GO:0010646,GO:0010647,GO:0010941,GO:0012505,GO:0014066,GO:0014068,GO:0014070,GO:0014823,GO:0014854,GO:0015031,GO:0015833,GO:0015980,GO:0016020,GO:0016043,GO:0016125,GO:0016192,GO:0016209,GO:0016491,GO:0016627,GO:0016628,GO:0016684,GO:0016787,GO:0016810,GO:0016811,GO:0016999,GO:0017001,GO:0017144,GO:0019166,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0020027,GO:0020037,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030141,GO:0031090,GO:0031323,GO:0031326,GO:0031410,GO:0031667,GO:0031903,GO:0031907,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032088,GO:0032355,GO:0032501,GO:0032502,GO:0032868,GO:0032940,GO:0033036,GO:0033189,GO:0033197,GO:0033273,GO:0033365,GO:0033554,GO:0033591,GO:0033993,GO:0034284,GO:0034599,GO:0034613,GO:0034774,GO:0034976,GO:0035206,GO:0035295,GO:0036094,GO:0036230,GO:0036293,GO:0036296,GO:0036335,GO:0038001,GO:0042119,GO:0042127,GO:0042221,GO:0042493,GO:0042542,GO:0042579,GO:0042592,GO:0042737,GO:0042743,GO:0042744,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043433,GO:0043434,GO:0043574,GO:0043933,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044255,GO:0044260,GO:0044281,GO:0044421,GO:0044422,GO:0044424,GO:0044429,GO:0044433,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045184,GO:0045321,GO:0045333,GO:0045471,GO:0046486,GO:0046677,GO:0046686,GO:0046688,GO:0046903,GO:0046906,GO:0046907,GO:0046983,GO:0048037,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048731,GO:0048856,GO:0048872,GO:0050661,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051092,GO:0051171,GO:0051179,GO:0051186,GO:0051187,GO:0051234,GO:0051239,GO:0051252,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051641,GO:0051649,GO:0051716,GO:0055093,GO:0055114,GO:0060205,GO:0060255,GO:0060429,GO:0060548,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070542,GO:0070727,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072001,GO:0072073,GO:0072163,GO:0072164,GO:0072359,GO:0072593,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0080184,GO:0097159,GO:0097237,GO:0097305,GO:0097708,GO:0098588,GO:0098754,GO:0098805,GO:0098869,GO:0099503,GO:0101002,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901615,GO:1901652,GO:1901698,GO:1901700,GO:1902531,GO:1902533,GO:1902652,GO:1903506,GO:1904813,GO:1990748,GO:2000112,GO:2001141
EggNOG free text desc.Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide
EggNOG OGs3QHHP@4776,COG0753@1,KOG0047@2759
EC1.11.1.6
COG Functional cat.P
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size147
Cds size147
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929551.7577062-CDS-H-elongata_contig101096:2102..22491622929551.7577062-CDS-H-elongata_contig101096:2102..2249Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig101096 2103..2249 +
1691679066.2381108-CDS-H-elongata_contig101096:2102..22491691679066.2381108-CDS-H-elongata_contig101096:2102..2249Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig101096 2103..2249 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101096.99.1prot_H-elongata_contig101096.99.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig101096 2103..2249 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig101096.99.1

>prot_H-elongata_contig101096.99.1 ID=prot_H-elongata_contig101096.99.1|Name=mRNA_H-elongata_contig101096.99.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp
MCVLGGRQDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVWPHNTL*
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mRNA from alignment at H-elongata_contig101096:2103..2249+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig101096.99.1 ID=mRNA_H-elongata_contig101096.99.1|Name=mRNA_H-elongata_contig101096.99.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=147bp|location=Sequence derived from alignment at H-elongata_contig101096:2103..2249+ (Himanthalia elongata Himel1 dioecious)
ATGTGTGTGTTGGGGGGGCGACAGGACTACACCCTGATCGATCACCTCGC
CCACTTCGATCGAGAGCGAATCCCGGAGCGCGTCGTGCACGCGAAGGGCG
CCGGAGCCTTTGGCTACTTCGAGGTGTGGCCACATAATACATTATGA
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Coding sequence (CDS) from alignment at H-elongata_contig101096:2103..2249+

>mRNA_H-elongata_contig101096.99.1 ID=mRNA_H-elongata_contig101096.99.1|Name=mRNA_H-elongata_contig101096.99.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=294bp|location=Sequence derived from alignment at H-elongata_contig101096:2103..2249+ (Himanthalia elongata Himel1 dioecious)
ATGTGTGTGTTGGGGGGGCGACAGGACTACACCCTGATCGATCACCTCGC
CCACTTCGATCGAGAGCGAATCCCGGAGCGCGTCGTGCACGCGAAGGGCG
CCGGAGCCTTTGGCTACTTCGAGGTGTGGCCACATAATACATTATGAATG
TGTGTGTTGGGGGGGCGACAGGACTACACCCTGATCGATCACCTCGCCCA
CTTCGATCGAGAGCGAATCCCGGAGCGCGTCGTGCACGCGAAGGGCGCCG
GAGCCTTTGGCTACTTCGAGGTGTGGCCACATAATACATTATGA
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