Homology
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
A0A2Z4BXC0_SACJA (Mannitol-1-phosphatase 2 n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A2Z4BXC0_SACJA)
HSP 1 Score: 228 bits (581), Expect = 6.290e-72
Identity = 117/158 (74.05%), Postives = 134/158 (84.81%), Query Frame = 2
Query: 14 PDQLEGLMPEFIRANAGKAFEFMVENVDKDRKEAGLGTVQEAFAAKSESEEMLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
PD+L+ LMPEF+R NAGKAFEFMVE VD++RK AG+ +V+E FAAKSE + MLDA++PHR KFGLK+FAELRAP+G G+ A TLLIQQKTETVDALSKIAQPC G+REVLAAL A +PFCISTTSPKPRVPASITACGLDEYFP +KV SG
Sbjct: 44 PDKLDNLMPEFVRDNAGKAFEFMVETVDEERKAAGMDSVEEMFAAKSEPQNMLDAVDPHRKKFGLKSFAELRAPEG-GE-------AATLLIQQKTETVDALSKIAQPCNGVREVLAALTAATVPFCISTTSPKPRVPASITACGLDEYFPPDKVHSG 193
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
D8LC90_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC90_ECTSI)
HSP 1 Score: 196 bits (498), Expect = 2.130e-59
Identity = 107/158 (67.72%), Postives = 117/158 (74.05%), Query Frame = 2
Query: 14 PDQLEGLMPEFIRANAGKAFEFMVENVDKDRKEAGLGTVQEAFAAKSESEEMLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
PD+L+GLMPEF+R NAGKAFEFMVE VD+DRK AGL T+ EAFAAKSE +EMLD LRAP G G+ E LLIQQKTETVDALSKIAQPC G+ EVLAAL AG+ FCISTTSPKPRVPASITAC LDEYFP +KV SG
Sbjct: 44 PDKLDGLMPEFVRDNAGKAFEFMVEKVDEDRKAAGLSTISEAFAAKSEPKEMLDXXXXXXXXXXXXXXXXLRAPDG-GEKE-------NLLIQQKTETVDALSKIAQPCNGVPEVLAALTAAGVAFCISTTSPKPRVPASITACKLDEYFPADKVHSG 193
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
A0A835ZES5_9STRA (Haloacid dehalogenase-like hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES5_9STRA)
HSP 1 Score: 162 bits (409), Expect = 4.480e-46
Identity = 88/159 (55.35%), Postives = 105/159 (66.04%), Query Frame = 2
Query: 11 APDQLEGLMPEFIRANAGKAFEFMVENVDKDRKEAGLGTVQEAFAAKSESEEMLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
AP L +PE+IR NAGKAFEFM+E D+DRK+AGL T +E AK E ++ I+ +R KFGL E + TLL QQK ETV+ALSK+AQPCPGI E L L K GIPFCISTTSPKPRVP SI++CGLD +FP +KV SG
Sbjct: 43 APSDLITQLPEYIRNNAGKAFEFMMEATDEDRKKAGLDTAEEMRQAKREDPAAVEVIDGYRKKFGLPPLRECKYA--------------TLLEQQKLETVEALSKVAQPCPGIPETLDELVKMGIPFCISTTSPKPRVPVSISSCGLDHHFPADKVHSG 187
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
A0A6H5KNB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNB9_9PHAE)
HSP 1 Score: 154 bits (388), Expect = 5.870e-44
Identity = 81/107 (75.70%), Postives = 87/107 (81.31%), Query Frame = 2
Query: 167 MLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
MLDA++PHR KFGLKTFAELRAP G G+ E LLIQQKTETVDALSKIAQPC G+ EVLAAL AG+ FCISTTSPKPRVPASITAC LDEYFP +KV SG
Sbjct: 1 MLDAVDPHRKKFGLKTFAELRAPDG-GEKE-------NLLIQQKTETVDALSKIAQPCNGVPEVLAALTAAGVAFCISTTSPKPRVPASITACKLDEYFPADKVHSG 99
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
C1MV72_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MV72_MICPC)
HSP 1 Score: 142 bits (359), Expect = 3.630e-38
Identity = 79/149 (53.02%), Postives = 98/149 (65.77%), Query Frame = 2
Query: 41 EFIRANAGKAFEFMVENVDKDRKEAGLGTVQEAFAAKSESEEMLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
++IR NAGKAFEFMV+ V++DRK AGL +++EA A+ E+ L ++ RAKFGL AE R G G D +L QK ETVDALS A PC + VLA+L+ GIPFCISTTS KPRVP S+ +CG EYFP EK+ SG
Sbjct: 100 DYIRDNAGKAFEFMVDVVEEDRKAAGLSSIEEARASAGEAPATLAVVDAGRAKFGLPPLAETR---GLGKD---------ILTLQKDETVDALSVAAHPCDNVPGVLASLKAKGIPFCISTTSGKPRVPVSVVSCGYTEYFPPEKIHSG 236
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
A0A068B0R3_SACJA (Mannitol-1-phosphatase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A068B0R3_SACJA)
HSP 1 Score: 142 bits (358), Expect = 9.230e-38
Identity = 78/151 (51.66%), Postives = 99/151 (65.56%), Query Frame = 2
Query: 35 MPEFIRANAGKAFEFMVENVDKDRKEAGLGTVQEAFAAKSESEEMLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
M E++R NAGKAFEFM+E V+ DRKE GL + A A +E+ E++ ++ RAK+GLK +LRA D +L QQK ETVDALS +A+P G+ L LR +PF I+TTSPKPRVPASI ACGLD+YFP +KV SG
Sbjct: 140 MSEYVRNNAGKAFEFMLEVVEADRKEQGLPDIATARAESAENPEIMKVVDAERAKYGLKPLGDLRAAGTLKD----------ILTQQKEETVDALSVVARPVEGMVNALDELRARKLPFAIATTSPKPRVPASIHACGLDDYFPADKVHSG 280
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
A0A836CC37_9STRA (Haloacid dehalogenase-like hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC37_9STRA)
HSP 1 Score: 135 bits (341), Expect = 8.220e-37
Identity = 74/158 (46.84%), Postives = 99/158 (62.66%), Query Frame = 2
Query: 14 PDQLEGLMPEFIRANAGKAFEFMVENVDKDRKEAGLGTVQEAFAAKSESEEMLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
P +LEG M ++R NAGKAFEFM+E + +RK+AGL ++ A+ E +L ++ RA GL + T +TLL QQK ETV +LSK+A+P G+R+ L +L +G+PF ISTTSPKPRVP SIT+CG DE+FP KV SG
Sbjct: 17 PAELEGQMESYVRNNAGKAFEFMLEACEAERKQAGLQPLE---TAQGEHPHVLALVDVQRAALGLPPL--------------RQTSYDTLLAQQKDETVQSLSKVARPVKGMRDALMSLTASGVPFAISTTSPKPRVPVSITSCGFDEFFPPHKVHSG 157
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
A0A7S1SLQ6_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SLQ6_9CHLO)
HSP 1 Score: 138 bits (347), Expect = 2.450e-36
Identity = 76/157 (48.41%), Postives = 99/157 (63.06%), Query Frame = 2
Query: 17 DQLEGLMPEFIRANAGKAFEFMVENVDKDRKEAGLGTVQEAFAAKSESEEMLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
D E M EFIR NAGKAFEFMV+ ++ R E GL ++E AAKSE +L+ ++ R +FGL+TFA +R+ E +D LIQQK +TV AL IA CPG++E L +L G+ F I+TTS KPRVP S+ A GLD +F EK+ SG
Sbjct: 102 DLTEPYMLEFIRENAGKAFEFMVDKCNESRAEVGLPPLEEVRAAKSEDPTLLEFVDKARTRFGLETFATMRSGDSEPED---------FLIQQKNDTVLALKTIATSCPGVKETLKSLTDMGLKFAIATTSGKPRVPVSVIASGLDTWFSPEKIHSG 249
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
A0A6H5KIT4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIT4_9PHAE)
HSP 1 Score: 135 bits (341), Expect = 3.010e-35
Identity = 74/151 (49.01%), Postives = 97/151 (64.24%), Query Frame = 2
Query: 35 MPEFIRANAGKAFEFMVENVDKDRKEAGLGTVQEAFAAKSESEEMLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
+ E++R NAGKAFEFM+E V+ DRK GL + A A +E +++ ++ R K+GLK ELRA D +L QQK ETVDALS +A+P G+ + L L+ IPF I+TTSPKPRVPAS+ ACGLDEYFP +K+ SG
Sbjct: 143 LTEYVRNNAGKAFEFMLEVVEADRKAQGLPDIATARAEGAEDPKIMKVVDEARVKYGLKPLGELRAAGTLKD----------ILTQQKEETVDALSVVARPVEGMVDTLDELKARKIPFAIATTSPKPRVPASVHACGLDEYFPADKIHSG 283
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Match:
A0A6S9FK33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FK33_HETAK)
HSP 1 Score: 130 bits (326), Expect = 3.170e-33
Identity = 73/157 (46.50%), Postives = 101/157 (64.33%), Query Frame = 2
Query: 26 EGLMPE---FIRANAGKAFEFMVENVDKDRKEAGLGTVQEAFAAKSESEEMLDAINPHRAKFGLKTFAELRAPKGEGDDEAKPTVAETLLIQQKTETVDALSKIAQPCPGIREVLAALRKAGIPFCISTTSPKPRVPASITACGLDEYFPKEKVRSG 487
+G++P+ +++ NAGKAFEFM+E ++ R AGL ++ EA E+ ++ A++ R+ GL+TF E+ A G D LL QQK ETV+ LSK+A P PG+ +VLA L +PF I+TTSPKPRVP SIT+CG D YFP +KV SG
Sbjct: 95 DGVLPDETAYVQDNAGKAFEFMMEVCEEQRAAAGLPSLAEARG--KENPAVMGAVDAARSALGLRTFPEILAQDGALPD---------LLAQQKEETVEGLSKVAGPNPGVADVLARLTADAVPFAIATTSPKPRVPVSITSCGFDAYFPADKVWSG 240
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100998.96.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 6.29e-72 / Id = 74.05 Expect = 2.13e-59 / Id = 67.72 Expect = 4.48e-46 / Id = 55.35 Expect = 5.87e-44 / Id = 75.70 Expect = 3.63e-38 / Id = 53.02 Expect = 9.23e-38 / Id = 51.66 Expect = 8.22e-37 / Id = 46.84 Expect = 2.45e-36 / Id = 48.41 Expect = 3.01e-35 / Id = 49.01 Expect = 3.17e-33 / Id = 46.50 Sequence A0A2Z4BXC0_SACJA D8LC90_ECTSI A0A835ZES5_9STRA A0A6H5KNB9_9PHAE C1MV72_MICPC A0A068B0R3_SACJA A0A836CC37_9STRA A0A7S1SLQ6_9CHLO A0A6H5KIT4_9PHAE A0A6S9FK33_HETAK
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100998.96.1
>prot_H-elongata_contig100998.96.1 ID=prot_H-elongata_contig100998.96.1|Name=mRNA_H-elongata_contig100998.96.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
RRSSPGSARRLDARVHSRQRGEGLRVHGGKCRQGQEGGRAGDRPRGVCGQ VGVRGDARRHKPPPREVRPQDLRRAACPQGGRRRRGEAHRRRDPPDTAED GDR* back to top mRNA from alignment at H-elongata_contig100998:77..2369+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig100998.96.1 ID=mRNA_H-elongata_contig100998.96.1|Name=mRNA_H-elongata_contig100998.96.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2293bp|location=Sequence derived from alignment at H-elongata_contig100998:77..2369+ (Himanthalia elongata Himel1 dioecious)CGCCGAAGCAGCCCCGGATCAGCTAGAAGGCTTGATGCCCGAGTTCATTC
GCGCCAACGCGGGGAAGGCCTTCGAGTTCATGGTGGAAAATGTAGACAAG
GACAGGAAGGAGGCAGGGCTGGGGACCGTCCAAGAGGCGTTTGCGG GTAA
GCTTCATTCCCAAGGGGTGTTAGAGGAAATATGTTGAGGGTGGGCGCCGG
AGCGTTGTAAGACCCTAGTGGATTTTGACGGACCGAAGCGGATCAAATAT
CATATTTCAGAGACGGACACCAGAGGTTGCGTCATCGGCGCACGCAGTTT
CAAGTCCTCGTGGTTGGAGGCGCGTGATCAAATCATGTTTTATTGGTTAC
GGTTTTGTTGGGGGGTTTTCGTTGCTTGTGCGCAAAAAAAACGTGTGCGT
CGTGATTGCGTGCATCGTGAAATGCTTGGCCGTGGCATCGTTGCTTACTC
CCGATAGTCGTGCACTGATGTAGACTGTGATCTTGCCGCTGTGTGGTCGA
CGATTGACTAAGCTCCATCCAGCGAGGGTGAGTCCGAGAGCAGAAGAGGG
GTCGATGATGGAAGCACGGAGAAGACGCCAGACATGAACTGTCCGAGGAG
TTGCCGAACCAGCCCCGCGTTACTTGATTTATATATATATATATACTTGT
TTCCATCCTGGAAAAATAAATAAATAATAATAAAAAAAATCCCTCTGAAA
CACCCAACACCGTCGTCTAAAAAGTTGCCGAAATAAAAAACGGTTCGGGA
TTGCCGCGATTTTTTTTTCGCCGCATTCCCGAACTTTGGTTTTCATCGAC
ACCTCGGCAATCAATTGCGCTTGGCCAATTTAGAGGGGTTATATAGCCAC
TCAGAAAGTTGTTCGGACAGAAATTCAGCCGGGAAGAGGCTCGATTATGA
ACGCCCATGAAGCTGAGTGCCAATTTTGTTGGATTGTTTTTAGATAATCC
TGTCCGGGCAATATATATATATATATATATATATTTAAAACGGAAAAAAA
TATCCGATTTCGGATTCGTGATCCCCACCCTAAAATTACCATACCCTGAT
AATTTCAACTTGATCTATGTTTTTTCGAAACAGGGGGTGTTTTCAGTCCA
TCCCCGCTTATTGCATTTTGTGGAATTTCTCCAGGGATACACATTAAACT
ATAATAGTTGATAGCCAGCAATAAATGTATATATATATAGATGTATATAT
TTATATATATATATATATATTATTTATTTATTTTAATAATATGTCCATCT
CATGCCACAAGGTTGTAGCGATATTTTTTTCAGACCTTAAAATCCATGAC
GCTTAACCGTGGAAGGCGCATGTAGCGTATGTCGTTTTTTACCGCAGTGC
CACAAGGCCCCTAAACGAGGATGTGGCTGATTTTGGTATAACAACCCATA
CGCCTATACCAGCACGCACTTGTGACACCATAAGCGACGCGATCGCCTGC
CGGCCTTTCCATCCCAACACGTTGGACTCATTACGTGGACCGAAGCCCTC
CTGCGCGATGGAAACCCACCGGAAATCAAAATGTCTTGTGCAACCTTTCT
TTGATTTGCTCTGCTATCGCGCCTAGCCAAGTCGGAGTCCGAGGAGATGC
TCGACGCCATAAACCCCCACCGCGCGAAGTTCGGCCTCAAGACCTTCGCC
GAGCTGCGTGCCCCCAAGGGGGAAGGCGACGACGAGGCGAAGCCCACCGT
CGCCGAGACCCTCCTGATACAGCAGAAGACGGAGACCGTTGA CGCACTCA
GCAAAATCGCGCAGCCGTGCCCCGGGATCAGGGAG GTATGAATGTATGTA
TGTATATAATGTATTTATGTATATATATATATATATATATATATATGTGC
GTGGGTAGCATGGACGTAAGGGGAAATGTAGAGGGGCAACAAGAAAAGGC
AAACGAAAAAAGGGTCCCTATGCCGTTAACCTTGAAAGCGCAGTCGTAGT
ACTGTTGTAATAGCTCATACTTTCTACTGTGGCACGGCGTTTGGAAGCCA
ATAGCAGAGGAAGACGGGGGGCAGGGGGCGCTCTGGCGTGCATGATGGAT
GTACATATATATATTTCCCTTGTCTCAGCGAGATCGGGGAGCTAAACGGG
CGCGATAGTGCTTCCACTTCCACGGTCCGTGGTCTTCTATATATATATAT
ATATTGAGCAGGTCTTGGCTGCCCTTAGGAAGGCGGGTATTCCCTTCTGC
ATCTCGACCACAAGCCCCAAGCCGAGGGTGCCGGCTTCAATCACGGCCTG
CGGATTGGACGAGTACTTCCCGAAAGAAAAGGTCAGGTCAGGG back to top Coding sequence (CDS) from alignment at H-elongata_contig100998:77..2369+
>mRNA_H-elongata_contig100998.96.1 ID=mRNA_H-elongata_contig100998.96.1|Name=mRNA_H-elongata_contig100998.96.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=624bp|location=Sequence derived from alignment at H-elongata_contig100998:77..2369+ (Himanthalia elongata Himel1 dioecious) CGCCGAAGCAGCCCCGGATCAGCTAGAAGGCTTGATGCCCGAGTTCATTC GCGCCAACGCGGGGAAGGCCTTCGAGTTCATGGTGGAAAATGTAGACAAG GACAGGAAGGAGGCAGGGCTGGGGACCGTCCAAGAGGCGTTTGCGGCGCC GAAGCAGCCCCGGATCAGCTAGAAGGCTTGATGCCCGAGTTCATTCGCGC CAACGCGGGGAAGGCCTTCGAGTTCATGGTGGAAAATGTAGACAAGGACA GGAAGGAGGCAGGGCTGGGGACCGTCCAAGAGGCGTTTGCGGCCAAGTCG GAGTCCGAGGAGATGCTCGACGCCATAAACCCCCACCGCGCGAAGTTCGG CCTCAAGACCTTCGCCGAGCTGCGTGCCCCCAAGGGGGAAGGCGACGACG AGGCGAAGCCCACCGTCGCCGAGACCCTCCTGATACAGCAGAAGACGGAG ACCGTTGACCAAGTCGGAGTCCGAGGAGATGCTCGACGCCATAAACCCCC ACCGCGCGAAGTTCGGCCTCAAGACCTTCGCCGAGCTGCGTGCCCCCAAG GGGGAAGGCGACGACGAGGCGAAGCCCACCGTCGCCGAGACCCTCCTGAT ACAGCAGAAGACGGAGACCGTTGA back to top