mRNA_H-elongata_contig10083.75.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig10083.75.1
Unique NamemRNA_H-elongata_contig10083.75.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: D8LM13_ECTSI (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM13_ECTSI)

HSP 1 Score: 377 bits (967), Expect = 1.480e-125
Identity = 195/277 (70.40%), Postives = 206/277 (74.37%), Query Frame = 1
Query:    4 EREPGIDPYLFPD-LQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERLTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831
            EREP IDP+LFP+       RPFEFEGKDVVFVSARVHPGETP+SFVFQGILRFLL P+DPRAAELRRRFVFKLVPLLNPDG+AAGHFRQDSYGNNLNRHY DP  ++HSSVYA KAVVMHHAAR +G                                               R RLTLYLDLHAH+S RGCFIYGNHLPSL  QAENQLLPLLMTL TPHFDF SCNF+LKHM RVDSGD GLSAEGTGRVFYG+ AGVLRSYTLECNYNTGK 
Sbjct:  234 EREPQIDPHLFPEHAPPSRCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGIAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARPSG-----------------------------------------------RGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKA 463          
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A6H5JLN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN3_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 3.980e-80
Identity = 135/204 (66.18%), Postives = 141/204 (69.12%), Query Frame = 1
Query:  220 LVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERLTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831
            LVPLLNPDG+AAGHFRQDSYGNNLNRHY DP  ++HSSVYA KAVVMHHAAR  G                                               R RLTLYLDLHAH+S RGCFIYGNHLPSL  QAENQLLPLLMTL TPHFDF SCNF+LKHM RVDSGD GLSAEGTGRVFYG+ AGVLRSYTLECNYNTGK 
Sbjct:    2 LVPLLNPDGIAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARPLG-----------------------------------------------RGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKA 158          
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A835Z1I4_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1I4_9STRA)

HSP 1 Score: 250 bits (638), Expect = 1.100e-74
Identity = 136/281 (48.40%), Postives = 163/281 (58.01%), Query Frame = 1
Query:   16 GIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERLTLYLDLHAHSSTRGCFIYGNHLPSLNH---------QAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831
            G  P   P+      RPF+F GK VVFVSARVHPGETPSSFV QG+L FLL  SD RAA LRRR+VFK+VP+LNPDGV  GH R D+ G NLNR Y  P P+   +++A K ++    +R   S P                                               L +YLDLHAH+  RGCFIYGNH   +           Q ENQL+PLLMT  + HFD+ +CNFSLKHM+RVD GDGG+SAEG GRV+ G+  GV+RSYTLECNYN G+ 
Sbjct:  173 GASPETAPEPAAVSQRPFKFAGKQVVFVSARVHPGETPSSFVLQGVLEFLLRQSDLRAAALRRRYVFKIVPMLNPDGVWRGHSRHDTLGKNLNRFYTSPCPRAQPTIFAVKKLLERLCSRADDSGP-----------------------------------------------LKVYLDLHAHAVKRGCFIYGNHRDRIGGGGSAGKGEGQIENQLIPLLMTANSAHFDYGACNFSLKHMTRVDGGDGGMSAEGAGRVWCGQVGGVVRSYTLECNYNGGRA 406          
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A672ZWA8_9TELE (Cytosolic carboxypeptidase-like protein 5 n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672ZWA8_9TELE)

HSP 1 Score: 240 bits (613), Expect = 5.150e-71
Identity = 135/298 (45.30%), Postives = 174/298 (58.39%), Query Frame = 1
Query:    1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAA--RLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRR------------VTCRER--------LTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGK 828
            +EREP + P LFPD      RP  F  K V F+S+RVHPGETPSSFVF G L F+L   DPRA  LR  FVFKL+P+LNPDGV  GH+R DS G NLNR Y +P P+ H S+YA K ++++H    R+  +Q   +      PT +   P     A+ +   P+  L + + +R            V  ++         +  Y+DLH H+S RGCF+YGN LP  +HQ EN L P L+ + + HFDF  CNFS K+M   D  DG  S EG+GRV   +  G+L SYTLECNYNTGK
Sbjct:  219 EEREPRL-PQLFPDTNT--PRPHRFASKRVFFLSSRVHPGETPSSFVFNGFLNFILRKDDPRAHALRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPELHPSIYAAKTLLLYHHTHNRVRRTQSSTRNSQCNSPTHTQTPPLNIKQANQHQSPPLTALEVSLNQRNAEKDANPAQPDVAMKQESIPPQEGGVAYYVDLHGHASKRGCFMYGNSLPDESHQVENMLYPRLIAVNSAHFDFLGCNFSEKNMYARDKRDG-QSKEGSGRVAIHKAIGLLHSYTLECNYNTGK 512          
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A3Q0RES4_AMPCI (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0RES4_AMPCI)

HSP 1 Score: 234 bits (597), Expect = 5.270e-69
Identity = 131/278 (47.12%), Postives = 166/278 (59.71%), Query Frame = 1
Query:    1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRE-RLTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831
            DERE  + P LFPD      RP  F GK V F+S+RVHPGETPSSFVF G L F+L   DPRA  LR  FVFKL+P+LNPDGV  GH+R DS G NLNR Y +P P+ H S+YA K ++++H            RLH T+ +           ++++    +    +     V  +E  +  Y+DLH H+S RGCF+YGN LP  + Q EN L P L+ + + HFDF  CNFS K+M   D  DG  S EG+GRV   +  G+L SYTLECNYNTGK 
Sbjct:  215 DEREVRL-PKLFPDTNT--PRPHRFAGKRVFFLSSRVHPGETPSSFVFNGFLNFILRRDDPRAHALRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPELHPSIYAAKTLLLYHHTH--------NRLHKTQSSTH---------SNTHGAGDVAVPQVEEQESVPPQEGSVAYYVDLHGHASKRGCFMYGNSLPDESQQVENMLYPRLIAVNSAHFDFLGCNFSEKNMYARDKRDG-QSKEGSGRVAIHKAIGLLHSYTLECNYNTGKT 471          
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A8C5UBP3_9PASS (Tubulin-glutamate carboxypeptidase n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5UBP3_9PASS)

HSP 1 Score: 233 bits (594), Expect = 1.270e-68
Identity = 131/276 (47.46%), Postives = 163/276 (59.06%), Query Frame = 1
Query:    1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERLTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGK 828
            ++REP +D  LFPD      RP  F GK V F+S+RVHPGETPSSFVF G L F+L   DPRA  LRR FVFKL+P+LNPDGV  GH+R DS G NLNR Y  P  + H +VY  KAV+++H             +H     + P  P  +    S+ P P +               L  Y+DLH H+S RGCF+YGN+    N Q EN L P L++L +PHFDF  CNFS K+M   D  DG  S EG+GRV   +  G++ SYTLECNYNTG+
Sbjct:  206 EKREPRLDK-LFPDTST--PRPRCFTGKKVFFLSSRVHPGETPSSFVFNGFLDFILREEDPRAQMLRRMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLHPDAELHPAVYGAKAVLLYH------------HIHSR---VLPGSPDWRTFEGSWSPPPPIAPK---------DSGLAYYVDLHGHASKRGCFMYGNNFSDENDQVENMLFPKLISLNSPHFDFTGCNFSEKNMYARDKRDG-QSKEGSGRVAIYKALGIIHSYTLECNYNTGR 453          
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A3P8WRI9_CYNSE (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WRI9_CYNSE)

HSP 1 Score: 231 bits (589), Expect = 1.550e-67
Identity = 135/297 (45.45%), Postives = 174/297 (58.59%), Query Frame = 1
Query:    1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHA----ARLAGSQPRRKRLHLTRPTIS------PWKPTQKPIAHSYHPSPILFLNIF-------VLRRVTCRER---LTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831
            +EREP + P LFPD      RP  F  K V F+S+RVHPGETPSSFVF G L F+L   DPRA  LR  FVFKL+P+LNPDGV  GH+R DS G NLNR Y +P P+ H S+YA K ++++H     +    SQ   K ++ T+P ++       W  T+     S   S     ++        V  + + + +   +  Y+DLH H+S RGCF+YGN LP  + Q EN L P L+ L + HFDF  CNFS K+M   D  DG  S EG+GRV   +  G+L SYTLECNYNTGK 
Sbjct:  214 EEREPRL-PNLFPDTNT--PRPHRFSNKKVFFLSSRVHPGETPSSFVFNGFLNFILRKDDPRAHALRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPELHPSIYAAKTLLLYHHTHNHSHTTHSQISEKDVNPTQPDVTVPMEENQWVITEMRKEGSSSSSLETVASVVGDGRPAEVKEQESVQPQDGGVAYYVDLHGHASKRGCFMYGNSLPDESQQVENMLYPRLIALNSAHFDFLGCNFSEKNMYARDKRDG-QSKEGSGRVAIHKAIGLLHSYTLECNYNTGKT 506          
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A3M0J1B6_HIRRU (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Hirundo rustica rustica TaxID=333673 RepID=A0A3M0J1B6_HIRRU)

HSP 1 Score: 229 bits (583), Expect = 1.870e-67
Identity = 135/293 (46.08%), Postives = 170/293 (58.02%), Query Frame = 1
Query:    1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAAR---LAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRR-------------VTCRER-LTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGK 828
            ++REP +D  LFPD      RP  F GK V F+S+RVHPGETPSSFVF G L F+L   DPRA  LRR FVFKL+P+LNPDGV  GH+R DS G NLNR Y  P  + H +VY  KAV+++H      L GS          R  +SP   +   +     P+P +   +  L +             +  R+  L  Y+DLH H+S RGCF+YGN     N Q EN L P L++L +PHFDF  CNFS K+M   D  DG  S EG+GRV   +  G++ SYTLECNYNTG+
Sbjct:  213 EKREPRLDK-LFPDTST--PRPRCFTGKRVFFLSSRVHPGETPSSFVFNGFLDFILREEDPRAQMLRRMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLHPDAELHPAVYGAKAVLLYHHVHSRVLPGSPD-------WRTFVSPLSTSSLSLKSPNCPTPAVEAMLSELDKTNNLRNSPGAWQPIAPRDSGLAYYVDLHGHASKRGCFMYGNSFSDENDQVENMLFPKLISLNSPHFDFTGCNFSEKNMYARDKRDG-QSKEGSGRVAVYKALGIIHSYTLECNYNTGR 494          
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A8C7MFC1_ONCKI (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Oncorhynchus kisutch TaxID=8019 RepID=A0A8C7MFC1_ONCKI)

HSP 1 Score: 230 bits (586), Expect = 2.150e-67
Identity = 128/278 (46.04%), Postives = 165/278 (59.35%), Query Frame = 1
Query:    1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRER-LTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831
            +ERE  +D  LFPD +    RP  F GK V F+S+RVHPGETPSSFVF+G L F+L   DPRA  LR  FVFKL+P+LNPDGV  GH+R DS G NLNR Y +P P  H S+YA K ++++H      +                 +   + ++ S   S  L +++     V  +E  +  Y+DLH H+S RGCF+YGN L   N Q EN L P L+ + + HFDF  CNFS K+M   D  DG  S EG+GRV   +  G+L SYTLECNYNTG+ 
Sbjct:  208 EEREHRLDK-LFPDAET--PRPHRFTGKQVFFLSSRVHPGETPSSFVFKGFLNFILRHDDPRAHTLRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPDLHPSIYAAKTLLLYHHTHNRTTXXXXXXXXXXXXRCCEDENDSQSVSESTPTSVPLEMSVIAGEPVPAQEGGVAYYVDLHGHASKRGCFMYGNSLSDENQQVENMLYPKLIAVNSAHFDFHGCNFSEKNMYARDKRDG-QSKEGSGRVAMHKAIGLLHSYTLECNYNTGRT 481          
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A3Q3EMS7_9LABR (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3EMS7_9LABR)

HSP 1 Score: 231 bits (588), Expect = 3.890e-67
Identity = 135/314 (42.99%), Postives = 171/314 (54.46%), Query Frame = 1
Query:    1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTI-------SPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERL------------------------------TLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831
            +EREP + P LFPD      RP  F GK V F+S+RVHPGETPSSFVF G L F+L   DPRA  LR  FVFKL+P+LNPDGV  GH+R DS G NLNR Y +P P+ H S+YA KA++++H            RLH T+ T        +   P     ++     P   L + + +R   ++ +                                Y+DLH H+S RGCF+YGN LP  + Q EN L P L+ + + HFDF  CNFS K+M   D  DG  S EG+GRV   +  G+L SYTLECNYNTGK 
Sbjct:  219 EEREPRL-PKLFPDTNT--PRPHRFPGKRVFFLSSRVHPGETPSSFVFNGFLHFILRRDDPRAHVLRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPELHPSIYAAKALLLYHHTH--------NRLHSTQSTTHCNSTPHTQTPPLNMKPSNKLQSPPFTALEVSLNQRNAEKDAIPAMPEVPMNSLSSSSETVAPETIPPHEGGVAYYVDLHGHASKRGCFMYGNSLPDESQQVENMLYPRLIAVNSAHFDFLGCNFSEKNMYARDKRDG-QSKEGSGRVAMHKAIGLLHSYTLECNYNTGKT 520          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LM13_ECTSI1.480e-12570.40Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]
A0A6H5JLN3_9PHAE3.980e-8066.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1I4_9STRA1.100e-7448.40Peptidase_M14 domain-containing protein n=1 Tax=Tr... [more]
A0A672ZWA8_9TELE5.150e-7145.30Cytosolic carboxypeptidase-like protein 5 n=2 Tax=... [more]
A0A3Q0RES4_AMPCI5.270e-6947.12Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]
A0A8C5UBP3_9PASS1.270e-6847.46Tubulin-glutamate carboxypeptidase n=1 Tax=Malurus... [more]
A0A3P8WRI9_CYNSE1.550e-6745.45Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]
A0A3M0J1B6_HIRRU1.870e-6746.08Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]
A0A8C7MFC1_ONCKI2.150e-6746.04Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]
A0A3Q3EMS7_9LABR3.890e-6742.99Cytosolic carboxypeptidase-like protein 5 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig10083contigH-elongata_contig10083:1513..3441 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score379.8
Seed ortholog evalue1.1e-102
Seed eggNOG ortholog2880.D8LM13
Preferred nameAGBL5
GOsGO:0002252,GO:0002376,GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007275,GO:0008092,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009605,GO:0009607,GO:0009615,GO:0009790,GO:0009792,GO:0009987,GO:0015630,GO:0015631,GO:0016043,GO:0016787,GO:0018193,GO:0018200,GO:0019538,GO:0022607,GO:0030030,GO:0030031,GO:0030496,GO:0032501,GO:0032502,GO:0035608,GO:0035610,GO:0035611,GO:0036211,GO:0043009,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044421,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044782,GO:0045171,GO:0048856,GO:0050896,GO:0051607,GO:0051704,GO:0051707,GO:0060271,GO:0070011,GO:0070925,GO:0071704,GO:0071840,GO:0072686,GO:0098542,GO:0120031,GO:0120036,GO:0140096,GO:1901564
EggNOG free text desc.protein deglutamylation
EggNOG OGsCOG2866@1,KOG3641@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptidase M14, carboxypeptidase A
Ec32 orthologEc-14_002450.1
Exons5
Model size834
Cds size834
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig10083.75.1prot_H-elongata_contig10083.75.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig10083 1513..3441 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929549.3095074-CDS-H-elongata_contig10083:1512..17251622929549.3095074-CDS-H-elongata_contig10083:1512..1725Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 1513..1725 -
1691679065.071876-CDS-H-elongata_contig10083:1512..17251691679065.071876-CDS-H-elongata_contig10083:1512..1725Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 1513..1725 -
1622929549.326665-CDS-H-elongata_contig10083:2102..23371622929549.326665-CDS-H-elongata_contig10083:2102..2337Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 2103..2337 -
1691679065.082016-CDS-H-elongata_contig10083:2102..23371691679065.082016-CDS-H-elongata_contig10083:2102..2337Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 2103..2337 -
1622929549.344956-CDS-H-elongata_contig10083:2505..26721622929549.344956-CDS-H-elongata_contig10083:2505..2672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 2506..2672 -
1691679065.0898595-CDS-H-elongata_contig10083:2505..26721691679065.0898595-CDS-H-elongata_contig10083:2505..2672Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 2506..2672 -
1622929549.3599992-CDS-H-elongata_contig10083:2945..30061622929549.3599992-CDS-H-elongata_contig10083:2945..3006Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 2946..3006 -
1691679065.097351-CDS-H-elongata_contig10083:2945..30061691679065.097351-CDS-H-elongata_contig10083:2945..3006Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 2946..3006 -
1622929549.373923-CDS-H-elongata_contig10083:3283..34411622929549.373923-CDS-H-elongata_contig10083:3283..3441Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 3284..3441 -
1691679065.1048348-CDS-H-elongata_contig10083:3283..34411691679065.1048348-CDS-H-elongata_contig10083:3283..3441Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig10083 3284..3441 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig10083.75.1

>prot_H-elongata_contig10083.75.1 ID=prot_H-elongata_contig10083.75.1|Name=mRNA_H-elongata_contig10083.75.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp
DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQG
ILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRH
YEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQ
KPIAHSYHPSPILFLNIFVLRRVTCRERLTLYLDLHAHSSTRGCFIYGNH
LPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEG
TGRVFYGRRAGVLRSYTLECNYNTGKV*
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mRNA from alignment at H-elongata_contig10083:1513..3441-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig10083.75.1 ID=mRNA_H-elongata_contig10083.75.1|Name=mRNA_H-elongata_contig10083.75.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1929bp|location=Sequence derived from alignment at H-elongata_contig10083:1513..3441- (Himanthalia elongata Himel1 dioecious)
GACGAGCGAGAACCTGGCATCGACCCTTATTTGTTCCCGGATCTGCAGCA GCGGGGAAGCCGGCCTTTCGAGTTCGAGGGAAAGGACGTCGTCTTCGTCT CCGCCAGAGTGCACCCAGGGGAAACCCCGTCGAGCTTTGTTTTTCAGGGG ATACTACGGTGTGTGCACGAATGTATCGGTATGCGCACGCAAATGAACGT GAGCGAAAACCCTCGTGTTGTGCTCTTCACTCAGTGGCGACGATGCCACT GCTGACGATGGGTTGGTCCCGCGATTGATAAGGTACGGCACAGCAGAACA AGGGAGAGAGCGCTCAAAGGGAAAGCTCAATATACCACGTTGTAGTGGAG TTTCTCACCACCGCGTCTCGTGACCAATGGTACGCCAACCTTCCTATCAC ACGCCCCCCCCCCACGTGCCGCCTTCTCCCTAAAGATTTCTCCTAAATCC CAGTGACCCCCGTGCCGCCGAGCTCCGTCGACGATTTGTTTTCAAGGTGT GAGAAGTCGAGAAACACACGCATCATTTTCCTTTCCCCTCCGTATGCCTA CATGGTTTGGTCATCACACGACTGGGGAATACTTCTTGTATATGCGTTCA CTACTCTGCGTTGCACGAAGGTTTCGACAGTTTAAACTGCAGCGACATTA ATTCACGGTTCAAGGTATATCGTGCCCTTTTGCGAAAATAGTTCCTCAAC CTCTTCCACTCTCGTCTTGTTTGCGCATACGCGCTTTCATGGTTTGCTCT CTCCATGTGGGCGTTGCAGTTAGTCCCGCTCTTGAATCCAGATGGCGTGG CGGCTGGTCATTTCCGACAAGACTCGTATGGCAACAACTTAAATCGTCAC TATGAAGACCCTCACCCCCAACGACACAGCTCCGTGTACGCCTGCAAAGC CGTTGTTATGCACCATGCGGCGAGACTGGCCGGAAGGTAGGCATGCGCTC GTGCGTAAATGTGCGTGTGTGTGTTCATATGATCAACTCTGGCGCGCGTA ACGTTGCTCTCGTGTCTTCTGTGCCGTGTTTCTGCTCGGGATAAACATGC ACGACAAATACATTCTCAAAAGAAGATTTGTGCAAGTTCTATATTTTAGG ACAGCCAGCCAAGGCGGAAGCGCCTACATCTGACCAGACCCACAATATCT CCTTGGAAACCCACCCAAAAACCCATTGCGCATTCGTATCATCCCAGCCC CATACTTTTCTTGAACATTTTCGTGTTACGCCGAGTAACTTGCAGGGAAC GTCTCACGTTGTACCTTGACCTACATGCACACTCTTCAACGAGAGGATGC TTCATATACGGCAATCACCTCCCAAGCCTGAACCACCAGGTGACCTTCTC GATAACGACGACATGGAACACACTTGAAGAGAAAGCTGTTGAAACCGCGT ACGTACGTGCTTATTTCTGTGGCTACAACTGTATCTCTATATTATAAAGC CCTTGCTCCGTGGCATCCCGTGGAGATATCATCGTAAGTCGGTGATATAA AGAGTATCAATGCACCAACCCGAGATAAATAGCGCACAGTAGATTCGTAG TATGAATATCTTAGCGTTAGTCATGTGGCCGTCGACTCAAACGATTCTTT TGAATTTGTGGCGTCCCATGCTGAATAACTACACCAATCTCATGTGATCT ATTCATCCATATCAATCCTACCCATCCCATCCTATATTCCATCCCACGCC AACCGATCCAGTGCAGGCAGAAAATCAACTTCTGCCTCTCCTCATGACGC TGTACACCCCGCACTTTGACTTCGCGTCGTGCAACTTCAGTCTCAAGCAC ATGTCGCGGGTAGACAGCGGGGACGGGGGCCTCAGCGCCGAGGGTACCGG GCGCGTGTTCTACGGGAGGCGTGCGGGGGTCTTACGATCCTACACGCTGG AGTGCAACTATAATACTGGCAAGGTGTAG
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Coding sequence (CDS) from alignment at H-elongata_contig10083:1513..3441-

>mRNA_H-elongata_contig10083.75.1 ID=mRNA_H-elongata_contig10083.75.1|Name=mRNA_H-elongata_contig10083.75.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1668bp|location=Sequence derived from alignment at H-elongata_contig10083:1513..3441- (Himanthalia elongata Himel1 dioecious)
GACGAGCGAGAACCTGGCATCGACCCTTATTTGTTCCCGGATCTGCAGCA
GCGGGGAAGCCGGCCTTTCGAGTTCGAGGGAAAGGACGTCGTCTTCGTCT
CCGCCAGAGTGCACCCAGGGGAAACCCCGTCGAGCTTTGTTTTTCAGGGG
ATACTACGGACGAGCGAGAACCTGGCATCGACCCTTATTTGTTCCCGGAT
CTGCAGCAGCGGGGAAGCCGGCCTTTCGAGTTCGAGGGAAAGGACGTCGT
CTTCGTCTCCGCCAGAGTGCACCCAGGGGAAACCCCGTCGAGCTTTGTTT
TTCAGGGGATACTACGATTTCTCCTAAATCCCAGTGACCCCCGTGCCGCC
GAGCTCCGTCGACGATTTGTTTTCAAGATTTCTCCTAAATCCCAGTGACC
CCCGTGCCGCCGAGCTCCGTCGACGATTTGTTTTCAAGTTAGTCCCGCTC
TTGAATCCAGATGGCGTGGCGGCTGGTCATTTCCGACAAGACTCGTATGG
CAACAACTTAAATCGTCACTATGAAGACCCTCACCCCCAACGACACAGCT
CCGTGTACGCCTGCAAAGCCGTTGTTATGCACCATGCGGCGAGACTGGCC
GGAAGTTAGTCCCGCTCTTGAATCCAGATGGCGTGGCGGCTGGTCATTTC
CGACAAGACTCGTATGGCAACAACTTAAATCGTCACTATGAAGACCCTCA
CCCCCAACGACACAGCTCCGTGTACGCCTGCAAAGCCGTTGTTATGCACC
ATGCGGCGAGACTGGCCGGAAGCCAGCCAAGGCGGAAGCGCCTACATCTG
ACCAGACCCACAATATCTCCTTGGAAACCCACCCAAAAACCCATTGCGCA
TTCGTATCATCCCAGCCCCATACTTTTCTTGAACATTTTCGTGTTACGCC
GAGTAACTTGCAGGGAACGTCTCACGTTGTACCTTGACCTACATGCACAC
TCTTCAACGAGAGGATGCTTCATATACGGCAATCACCTCCCAAGCCTGAA
CCACCAGCCAGCCAAGGCGGAAGCGCCTACATCTGACCAGACCCACAATA
TCTCCTTGGAAACCCACCCAAAAACCCATTGCGCATTCGTATCATCCCAG
CCCCATACTTTTCTTGAACATTTTCGTGTTACGCCGAGTAACTTGCAGGG
AACGTCTCACGTTGTACCTTGACCTACATGCACACTCTTCAACGAGAGGA
TGCTTCATATACGGCAATCACCTCCCAAGCCTGAACCACCAGGCAGAAAA
TCAACTTCTGCCTCTCCTCATGACGCTGTACACCCCGCACTTTGACTTCG
CGTCGTGCAACTTCAGTCTCAAGCACATGTCGCGGGTAGACAGCGGGGAC
GGGGGCCTCAGCGCCGAGGGTACCGGGCGCGTGTTCTACGGGAGGCGTGC
GGGGGTCTTACGATCCTACACGCTGGAGTGCAACTATAATACTGGCAAGG
TGTAGGCAGAAAATCAACTTCTGCCTCTCCTCATGACGCTGTACACCCCG
CACTTTGACTTCGCGTCGTGCAACTTCAGTCTCAAGCACATGTCGCGGGT
AGACAGCGGGGACGGGGGCCTCAGCGCCGAGGGTACCGGGCGCGTGTTCT
ACGGGAGGCGTGCGGGGGTCTTACGATCCTACACGCTGGAGTGCAACTAT
AATACTGGCAAGGTGTAG
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