mRNA_H-elongata_contig10083.75.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: D8LM13_ECTSI (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM13_ECTSI) HSP 1 Score: 377 bits (967), Expect = 1.480e-125 Identity = 195/277 (70.40%), Postives = 206/277 (74.37%), Query Frame = 1 Query: 4 EREPGIDPYLFPD-LQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERLTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831 EREP IDP+LFP+ RPFEFEGKDVVFVSARVHPGETP+SFVFQGILRFLL P+DPRAAELRRRFVFKLVPLLNPDG+AAGHFRQDSYGNNLNRHY DP ++HSSVYA KAVVMHHAAR +G R RLTLYLDLHAH+S RGCFIYGNHLPSL QAENQLLPLLMTL TPHFDF SCNF+LKHM RVDSGD GLSAEGTGRVFYG+ AGVLRSYTLECNYNTGK Sbjct: 234 EREPQIDPHLFPEHAPPSRCRPFEFEGKDVVFVSARVHPGETPASFVFQGILRFLLEPNDPRAAELRRRFVFKLVPLLNPDGIAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARPSG-----------------------------------------------RGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKA 463
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A6H5JLN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN3_9PHAE) HSP 1 Score: 261 bits (666), Expect = 3.980e-80 Identity = 135/204 (66.18%), Postives = 141/204 (69.12%), Query Frame = 1 Query: 220 LVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERLTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831 LVPLLNPDG+AAGHFRQDSYGNNLNRHY DP ++HSSVYA KAVVMHHAAR G R RLTLYLDLHAH+S RGCFIYGNHLPSL QAENQLLPLLMTL TPHFDF SCNF+LKHM RVDSGD GLSAEGTGRVFYG+ AGVLRSYTLECNYNTGK Sbjct: 2 LVPLLNPDGIAAGHFRQDSYGNNLNRHYIDPDVEKHSSVYASKAVVMHHAARPLG-----------------------------------------------RGRLTLYLDLHAHASARGCFIYGNHLPSLEDQAENQLLPLLMTLNTPHFDFGSCNFTLKHMCRVDSGDAGLSAEGTGRVFYGKHAGVLRSYTLECNYNTGKA 158
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A835Z1I4_9STRA (Peptidase_M14 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1I4_9STRA) HSP 1 Score: 250 bits (638), Expect = 1.100e-74 Identity = 136/281 (48.40%), Postives = 163/281 (58.01%), Query Frame = 1 Query: 16 GIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERLTLYLDLHAHSSTRGCFIYGNHLPSLNH---------QAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831 G P P+ RPF+F GK VVFVSARVHPGETPSSFV QG+L FLL SD RAA LRRR+VFK+VP+LNPDGV GH R D+ G NLNR Y P P+ +++A K ++ +R S P L +YLDLHAH+ RGCFIYGNH + Q ENQL+PLLMT + HFD+ +CNFSLKHM+RVD GDGG+SAEG GRV+ G+ GV+RSYTLECNYN G+ Sbjct: 173 GASPETAPEPAAVSQRPFKFAGKQVVFVSARVHPGETPSSFVLQGVLEFLLRQSDLRAAALRRRYVFKIVPMLNPDGVWRGHSRHDTLGKNLNRFYTSPCPRAQPTIFAVKKLLERLCSRADDSGP-----------------------------------------------LKVYLDLHAHAVKRGCFIYGNHRDRIGGGGSAGKGEGQIENQLIPLLMTANSAHFDYGACNFSLKHMTRVDGGDGGMSAEGAGRVWCGQVGGVVRSYTLECNYNGGRA 406
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A672ZWA8_9TELE (Cytosolic carboxypeptidase-like protein 5 n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A672ZWA8_9TELE) HSP 1 Score: 240 bits (613), Expect = 5.150e-71 Identity = 135/298 (45.30%), Postives = 174/298 (58.39%), Query Frame = 1 Query: 1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAA--RLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRR------------VTCRER--------LTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGK 828 +EREP + P LFPD RP F K V F+S+RVHPGETPSSFVF G L F+L DPRA LR FVFKL+P+LNPDGV GH+R DS G NLNR Y +P P+ H S+YA K ++++H R+ +Q + PT + P A+ + P+ L + + +R V ++ + Y+DLH H+S RGCF+YGN LP +HQ EN L P L+ + + HFDF CNFS K+M D DG S EG+GRV + G+L SYTLECNYNTGK Sbjct: 219 EEREPRL-PQLFPDTNT--PRPHRFASKRVFFLSSRVHPGETPSSFVFNGFLNFILRKDDPRAHALRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPELHPSIYAAKTLLLYHHTHNRVRRTQSSTRNSQCNSPTHTQTPPLNIKQANQHQSPPLTALEVSLNQRNAEKDANPAQPDVAMKQESIPPQEGGVAYYVDLHGHASKRGCFMYGNSLPDESHQVENMLYPRLIAVNSAHFDFLGCNFSEKNMYARDKRDG-QSKEGSGRVAIHKAIGLLHSYTLECNYNTGK 512
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A3Q0RES4_AMPCI (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0RES4_AMPCI) HSP 1 Score: 234 bits (597), Expect = 5.270e-69 Identity = 131/278 (47.12%), Postives = 166/278 (59.71%), Query Frame = 1 Query: 1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRE-RLTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831 DERE + P LFPD RP F GK V F+S+RVHPGETPSSFVF G L F+L DPRA LR FVFKL+P+LNPDGV GH+R DS G NLNR Y +P P+ H S+YA K ++++H RLH T+ + ++++ + + V +E + Y+DLH H+S RGCF+YGN LP + Q EN L P L+ + + HFDF CNFS K+M D DG S EG+GRV + G+L SYTLECNYNTGK Sbjct: 215 DEREVRL-PKLFPDTNT--PRPHRFAGKRVFFLSSRVHPGETPSSFVFNGFLNFILRRDDPRAHALRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPELHPSIYAAKTLLLYHHTH--------NRLHKTQSSTH---------SNTHGAGDVAVPQVEEQESVPPQEGSVAYYVDLHGHASKRGCFMYGNSLPDESQQVENMLYPRLIAVNSAHFDFLGCNFSEKNMYARDKRDG-QSKEGSGRVAIHKAIGLLHSYTLECNYNTGKT 471
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A8C5UBP3_9PASS (Tubulin-glutamate carboxypeptidase n=1 Tax=Malurus cyaneus samueli TaxID=2593467 RepID=A0A8C5UBP3_9PASS) HSP 1 Score: 233 bits (594), Expect = 1.270e-68 Identity = 131/276 (47.46%), Postives = 163/276 (59.06%), Query Frame = 1 Query: 1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERLTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGK 828 ++REP +D LFPD RP F GK V F+S+RVHPGETPSSFVF G L F+L DPRA LRR FVFKL+P+LNPDGV GH+R DS G NLNR Y P + H +VY KAV+++H +H + P P + S+ P P + L Y+DLH H+S RGCF+YGN+ N Q EN L P L++L +PHFDF CNFS K+M D DG S EG+GRV + G++ SYTLECNYNTG+ Sbjct: 206 EKREPRLDK-LFPDTST--PRPRCFTGKKVFFLSSRVHPGETPSSFVFNGFLDFILREEDPRAQMLRRMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLHPDAELHPAVYGAKAVLLYH------------HIHSR---VLPGSPDWRTFEGSWSPPPPIAPK---------DSGLAYYVDLHGHASKRGCFMYGNNFSDENDQVENMLFPKLISLNSPHFDFTGCNFSEKNMYARDKRDG-QSKEGSGRVAIYKALGIIHSYTLECNYNTGR 453
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A3P8WRI9_CYNSE (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Cynoglossus semilaevis TaxID=244447 RepID=A0A3P8WRI9_CYNSE) HSP 1 Score: 231 bits (589), Expect = 1.550e-67 Identity = 135/297 (45.45%), Postives = 174/297 (58.59%), Query Frame = 1 Query: 1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHA----ARLAGSQPRRKRLHLTRPTIS------PWKPTQKPIAHSYHPSPILFLNIF-------VLRRVTCRER---LTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831 +EREP + P LFPD RP F K V F+S+RVHPGETPSSFVF G L F+L DPRA LR FVFKL+P+LNPDGV GH+R DS G NLNR Y +P P+ H S+YA K ++++H + SQ K ++ T+P ++ W T+ S S ++ V + + + + + Y+DLH H+S RGCF+YGN LP + Q EN L P L+ L + HFDF CNFS K+M D DG S EG+GRV + G+L SYTLECNYNTGK Sbjct: 214 EEREPRL-PNLFPDTNT--PRPHRFSNKKVFFLSSRVHPGETPSSFVFNGFLNFILRKDDPRAHALRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPELHPSIYAAKTLLLYHHTHNHSHTTHSQISEKDVNPTQPDVTVPMEENQWVITEMRKEGSSSSSLETVASVVGDGRPAEVKEQESVQPQDGGVAYYVDLHGHASKRGCFMYGNSLPDESQQVENMLYPRLIALNSAHFDFLGCNFSEKNMYARDKRDG-QSKEGSGRVAIHKAIGLLHSYTLECNYNTGKT 506
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A3M0J1B6_HIRRU (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Hirundo rustica rustica TaxID=333673 RepID=A0A3M0J1B6_HIRRU) HSP 1 Score: 229 bits (583), Expect = 1.870e-67 Identity = 135/293 (46.08%), Postives = 170/293 (58.02%), Query Frame = 1 Query: 1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAAR---LAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRR-------------VTCRER-LTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGK 828 ++REP +D LFPD RP F GK V F+S+RVHPGETPSSFVF G L F+L DPRA LRR FVFKL+P+LNPDGV GH+R DS G NLNR Y P + H +VY KAV+++H L GS R +SP + + P+P + + L + + R+ L Y+DLH H+S RGCF+YGN N Q EN L P L++L +PHFDF CNFS K+M D DG S EG+GRV + G++ SYTLECNYNTG+ Sbjct: 213 EKREPRLDK-LFPDTST--PRPRCFTGKRVFFLSSRVHPGETPSSFVFNGFLDFILREEDPRAQMLRRMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLHPDAELHPAVYGAKAVLLYHHVHSRVLPGSPD-------WRTFVSPLSTSSLSLKSPNCPTPAVEAMLSELDKTNNLRNSPGAWQPIAPRDSGLAYYVDLHGHASKRGCFMYGNSFSDENDQVENMLFPKLISLNSPHFDFTGCNFSEKNMYARDKRDG-QSKEGSGRVAVYKALGIIHSYTLECNYNTGR 494
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A8C7MFC1_ONCKI (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Oncorhynchus kisutch TaxID=8019 RepID=A0A8C7MFC1_ONCKI) HSP 1 Score: 230 bits (586), Expect = 2.150e-67 Identity = 128/278 (46.04%), Postives = 165/278 (59.35%), Query Frame = 1 Query: 1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTISPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRER-LTLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831 +ERE +D LFPD + RP F GK V F+S+RVHPGETPSSFVF+G L F+L DPRA LR FVFKL+P+LNPDGV GH+R DS G NLNR Y +P P H S+YA K ++++H + + + ++ S S L +++ V +E + Y+DLH H+S RGCF+YGN L N Q EN L P L+ + + HFDF CNFS K+M D DG S EG+GRV + G+L SYTLECNYNTG+ Sbjct: 208 EEREHRLDK-LFPDAET--PRPHRFTGKQVFFLSSRVHPGETPSSFVFKGFLNFILRHDDPRAHTLRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPDLHPSIYAAKTLLLYHHTHNRTTXXXXXXXXXXXXRCCEDENDSQSVSESTPTSVPLEMSVIAGEPVPAQEGGVAYYVDLHGHASKRGCFMYGNSLSDENQQVENMLYPKLIAVNSAHFDFHGCNFSEKNMYARDKRDG-QSKEGSGRVAMHKAIGLLHSYTLECNYNTGRT 481
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Match: A0A3Q3EMS7_9LABR (Cytosolic carboxypeptidase-like protein 5 n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3EMS7_9LABR) HSP 1 Score: 231 bits (588), Expect = 3.890e-67 Identity = 135/314 (42.99%), Postives = 171/314 (54.46%), Query Frame = 1 Query: 1 DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGILRFLLNPSDPRAAELRRRFVFKLVPLLNPDGVAAGHFRQDSYGNNLNRHYEDPHPQRHSSVYACKAVVMHHAARLAGSQPRRKRLHLTRPTI-------SPWKPTQKPIAHSYHPSPILFLNIFVLRRVTCRERL------------------------------TLYLDLHAHSSTRGCFIYGNHLPSLNHQAENQLLPLLMTLYTPHFDFASCNFSLKHMSRVDSGDGGLSAEGTGRVFYGRRAGVLRSYTLECNYNTGKV 831 +EREP + P LFPD RP F GK V F+S+RVHPGETPSSFVF G L F+L DPRA LR FVFKL+P+LNPDGV GH+R DS G NLNR Y +P P+ H S+YA KA++++H RLH T+ T + P ++ P L + + +R ++ + Y+DLH H+S RGCF+YGN LP + Q EN L P L+ + + HFDF CNFS K+M D DG S EG+GRV + G+L SYTLECNYNTGK Sbjct: 219 EEREPRL-PKLFPDTNT--PRPHRFPGKRVFFLSSRVHPGETPSSFVFNGFLHFILRRDDPRAHVLRNMFVFKLIPMLNPDGVVRGHYRTDSRGVNLNRQYLNPSPELHPSIYAAKALLLYHHTH--------NRLHSTQSTTHCNSTPHTQTPPLNMKPSNKLQSPPFTALEVSLNQRNAEKDAIPAMPEVPMNSLSSSSETVAPETIPPHEGGVAYYVDLHGHASKRGCFMYGNSLPDESQQVENMLYPRLIAVNSAHFDFLGCNFSEKNMYARDKRDG-QSKEGSGRVAMHKAIGLLHSYTLECNYNTGKT 520 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10083.75.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10083.75.1 >prot_H-elongata_contig10083.75.1 ID=prot_H-elongata_contig10083.75.1|Name=mRNA_H-elongata_contig10083.75.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp DEREPGIDPYLFPDLQQRGSRPFEFEGKDVVFVSARVHPGETPSSFVFQGback to top mRNA from alignment at H-elongata_contig10083:1513..3441- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10083.75.1 ID=mRNA_H-elongata_contig10083.75.1|Name=mRNA_H-elongata_contig10083.75.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1929bp|location=Sequence derived from alignment at H-elongata_contig10083:1513..3441- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10083:1513..3441- >mRNA_H-elongata_contig10083.75.1 ID=mRNA_H-elongata_contig10083.75.1|Name=mRNA_H-elongata_contig10083.75.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1668bp|location=Sequence derived from alignment at H-elongata_contig10083:1513..3441- (Himanthalia elongata Himel1 dioecious)back to top |