mRNA_H-elongata_contig100751.70.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: A0A6H5KWW6_9PHAE (Dynamin-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWW6_9PHAE) HSP 1 Score: 135 bits (339), Expect = 1.120e-34 Identity = 69/102 (67.65%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 1 DELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAAVIAHYGDRVS 306 DELPY GLGKFGA FL KFQA ++PSP+L+H+NFV+TP IL A E G +GYP+ EVV+WFADRSDLI LVFD+ KLD+ EEFREVV A IA +GDR S Sbjct: 337 DELPYTGLGKFGASFLGKFQASIVPSPILEHINFVDTPGILAA---EKHGTPRGYPYPEVVKWFADRSDLIFLVFDSHKLDMGEEFREVVRA-IAEHGDRAS 434
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: A0A835Z9Q7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q7_9STRA) HSP 1 Score: 105 bits (262), Expect = 6.660e-25 Identity = 50/96 (52.08%), Postives = 69/96 (71.88%), Query Frame = 1 Query: 1 DELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAAVIAH 288 DELP+ GL +FGA FL F+A + + +L+H+ FV+TP +L + QG +GY F V+WFADRSD+ILLVFD KLD+SEEFR+++ A+ AH Sbjct: 119 DELPFTGLSRFGAAFLNHFEASICDAEILEHITFVDTPGVLVSGK---QGDQRGYSFAHAVKWFADRSDMILLVFDVHKLDISEEFRQLIGALGAH 211
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: A0A7S2KM23_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KM23_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.670e-24 Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 1 Query: 4 ELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAAVIAHYGDRV 303 ELP+AGLG+FG FL KF+A V PSPLL V ++TP +L + E Q + Y F EV WFADRSDLILL+FDA KLD+S+E +E++ + + D+V Sbjct: 152 ELPFAGLGEFGTAFLNKFEASVTPSPLLKRVTLIDTPGVL---SGEKQRLARAYDFSEVARWFADRSDLILLLFDAHKLDISDELKEIIEKIRPYNDDKV 248
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: A0A7S1WWF8_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WWF8_ALECA) HSP 1 Score: 99.4 bits (246), Expect = 3.650e-23 Identity = 48/91 (52.75%), Postives = 67/91 (73.63%), Query Frame = 1 Query: 4 ELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAA 276 ELPY+GL KFG+ FL KFQ LV + +L+HV FV+TP +L + + Q +GY F++V +W A R DL+LL+FDA KLD+S+EF+EV+ A Sbjct: 106 ELPYSGLSKFGSTFLSKFQVLVENAEILNHVTFVDTPGVL---SGDKQRTSRGYDFVKVCQWLASRCDLVLLLFDAHKLDISDEFKEVIQA 193
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: F0WLM2_9STRA (Uncharacterized protein AlNc14C147G7411 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLM2_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 1.520e-22 Identity = 47/95 (49.47%), Postives = 67/95 (70.53%), Query Frame = 1 Query: 4 ELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAAVIAH 288 +LPY GL FG FL KF+A LPS +L++++ ++TP IL + E Q +GY F++V WFA+RSDLILL+FDA KLD+S+EF+ V+ + H Sbjct: 129 DLPYGGLSMFGTAFLNKFEAAQLPSKVLENISVIDTPGIL---SGEKQRIQRGYDFVQVARWFAERSDLILLLFDAHKLDISDEFQRVIEVLKGH 220
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: A0A3F2RDZ0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RDZ0_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.860e-22 Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 4 ELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAAVIAHYGDRV 303 +LPY GL FG FL KF+A LP+PLL+ + V+TP IL + E Q +GY F +V WFA+RSDLILL+FDA KLD+S+EF+ V+ + H D+V Sbjct: 132 DLPYGGLSMFGTAFLNKFEAAQLPAPLLEQLTIVDTPGIL---SGEKQRIARGYDFTQVARWFAERSDLILLLFDAHKLDISDEFQRVIEVLQGH-NDKV 227
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: A0A813I9D6_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I9D6_POLGL) HSP 1 Score: 94.7 bits (234), Expect = 5.860e-22 Identity = 48/100 (48.00%), Postives = 66/100 (66.00%), Query Frame = 1 Query: 4 ELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAAVIAHYGDRV 303 +LPY GL +FG FL FQALVLP+ +L + F++TP +L Q G+ Y F + W ADR+DL+LL FDA KLD+S+EF+EV+ V+ Y D+V Sbjct: 114 QLPYQGLSRFGGSFLGSFQALVLPAKILRDITFIDTPGVLSGSK---QRIGRDYEFAAISAWMADRADLVLLTFDAHKLDISDEFQEVME-VLRPYADKV 209
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: F4PZF1_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PZF1_CAVFA) HSP 1 Score: 98.6 bits (244), Expect = 7.060e-22 Identity = 47/104 (45.19%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 1 DELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAAVIAHYGDRVSQV 312 + LPY GL KFG+ F+ KFQA + P+PLL+ ++F++TP +L + E Q G+ Y F +V W+A+RSD+ILL+FDA KLD+S+EF+ + + + Y D++ V Sbjct: 116 ESLPYRGLEKFGSGFMSKFQASLCPAPLLEKISFIDTPGVL---SGEKQRIGRAYDFPSLVSWYAERSDMILLLFDAHKLDISDEFKSAIES-LKGYDDKIKIV 215
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: A0A225WNS3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNS3_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 7.410e-22 Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 4 ELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAAVIAHYGDRV 303 +LPY GL FG FL KF+A LP+P+LD + V+TP IL + E Q +GY F +V WFA+RSDLILL+FDA KLD+S+EF+ V+ V+ D+V Sbjct: 134 DLPYGGLSMFGTAFLNKFEAAQLPAPVLDELTIVDTPGIL---SGEKQRIARGYDFTQVARWFAERSDLILLLFDAHKLDISDEFQRVIE-VLQGQSDKV 229
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Match: A0A6A4ZSB0_9STRA (Dynamin-type G domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZSB0_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.600e-21 Identity = 44/95 (46.32%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 4 ELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGAGQGYPFLEVVEWFADRSDLILLVFDALKLDVSEEFREVVAAVIAH 288 +LPY GL FG FL KF+A LP L+H+ ++TP IL + E Q +GY F++V +WFA+R+D++LL+FDA KLD+S+EF+ V+ + H Sbjct: 113 DLPYGGLSMFGTSFLNKFEASQLPCKQLEHMTVIDTPGIL---SGEKQRISRGYDFVQVAKWFAERADMVLLLFDAHKLDISDEFQRVIEVLKGH 204 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100751.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100751.70.1 >prot_H-elongata_contig100751.70.1 ID=prot_H-elongata_contig100751.70.1|Name=mRNA_H-elongata_contig100751.70.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp DELPYAGLGKFGAPFLRKFQALVLPSPLLDHVNFVETPSILPARTEEGQGback to top mRNA from alignment at H-elongata_contig100751:221..1947+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig100751.70.1 ID=mRNA_H-elongata_contig100751.70.1|Name=mRNA_H-elongata_contig100751.70.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1727bp|location=Sequence derived from alignment at H-elongata_contig100751:221..1947+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig100751:221..1947+ >mRNA_H-elongata_contig100751.70.1 ID=mRNA_H-elongata_contig100751.70.1|Name=mRNA_H-elongata_contig100751.70.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=624bp|location=Sequence derived from alignment at H-elongata_contig100751:221..1947+ (Himanthalia elongata Himel1 dioecious)back to top |