mRNA_H-elongata_contig100544.58.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: D8LCA9_ECTSI (Abhydrolase domain containing 14B n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCA9_ECTSI) HSP 1 Score: 170 bits (431), Expect = 6.960e-51 Identity = 83/119 (69.75%), Postives = 97/119 (81.51%), Query Frame = 1 Query: 1 MCNALGMSEANPAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDSMGTRVSKKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFLKYDV 357 +C+ LGM +PAVIVSPSMSGSFSVPLLL KP+LFAGYVPVAPG A ++AE+FAAVTGVPALIVYGE D MG+R S LS+IPGS ++M+ GA HP Y+DEPD+FHE LL FL D Sbjct: 124 ICSGLGMGVDSPAVIVSPSMSGSFSVPLLLSKPELFAGYVPVAPGQALSYTAEDFAAVTGVPALIVYGELDRMGSRASSLLSSIPGSRVLMVPGASHPCYIDEPDMFHESLLSFLNEDA 242
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: A0A7R9BXC4_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BXC4_9CRUS) HSP 1 Score: 117 bits (293), Expect = 4.920e-29 Identity = 55/105 (52.38%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 34 PAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDSMGTRVSKKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFLK 348 PAV+VSPSMSG+FS+ LL KP++FAG+VPVAP + + +E+ VP L++YG++D G RVS+KL IP S ++MI A HPAY+D+PD+FHE + FL+ Sbjct: 242 PAVVVSPSMSGTFSLSLLRSKPEMFAGFVPVAP-VMSDELTQEYLGSLRVPTLVLYGDRDQHGKRVSEKLGKIPTSRVVMIEEASHPAYIDQPDVFHELMYNFLR 345
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: A0A7R9GFX7_9CRUS (Hypothetical protein n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9GFX7_9CRUS) HSP 1 Score: 117 bits (293), Expect = 4.310e-28 Identity = 55/105 (52.38%), Postives = 77/105 (73.33%), Query Frame = 1 Query: 34 PAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDSMGTRVSKKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFLK 348 PAV+VSPSMSG+FS+ LL KP++FAG+VPVAP + + +E+ VP L++YG++D G RVS+KL IP S ++MI A HPAY+D+PD+FHE + FL+ Sbjct: 660 PAVVVSPSMSGTFSLSLLRSKPEMFAGFVPVAP-VMSDELTQEYLGSLRVPTLVLYGDRDQHGKRVSEKLGKIPTSRVVMIEEASHPAYIDQPDVFHELMYNFLR 763
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: A0A6P7MGH3_BETSP (protein ABHD14B isoform X1 n=3 Tax=Betta splendens TaxID=158456 RepID=A0A6P7MGH3_BETSP) HSP 1 Score: 102 bits (254), Expect = 2.340e-24 Identity = 54/117 (46.15%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 1 MCNALGMSEANPAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDSMGTRVS-KKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFLK 348 +C LG+S P V+VSPS+SG +S+P L++ L GYVPVAP + E++A+V VPALIVYG++D+ VS + LS +P ++++ GAGHP YLD+PD +H +L+FL+ Sbjct: 127 VCEELGLS---PVVVVSPSLSGMYSLPFLMQHQALVRGYVPVAPICTDRFTPEQYASVK-VPALIVYGDQDTQLGEVSLRNLSNLPRHRVVVMRGAGHPCYLDDPDAWHAAVLDFLQ 239
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: UPI000A1C2C46 (protein ABHD14B n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C2C46) HSP 1 Score: 101 bits (252), Expect = 2.370e-24 Identity = 51/117 (43.59%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 1 MCNALGMSEANPAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDS-MGTRVSKKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFLK 348 +C +LG++ P VI+SPS+SGS S+P L+ P + Y+PVAP + +AE++ +V VP LIVYGE+D +G V K L + +++I AGHP YLD PD++H+ LL+F+ Sbjct: 97 LCESLGLA---PVVIISPSLSGSHSLPFLIEHPSMVRAYIPVAPICTEKFTAEQYQSVK-VPTLIVYGERDMILGKEVVKNLKNLTNHKVVVIKDAGHPCYLDHPDIWHKELLDFIS 209
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: A0A2G8KXK4_STIJA (Putative alpha/beta hydrolase domain-containing protein 14B n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KXK4_STIJA) HSP 1 Score: 101 bits (252), Expect = 2.990e-24 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 10 ALGMSEANPAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDS-MGTRVSKKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFLK 348 ALG+ + P +I+SPSMSG FS+PLL P+ F GY+PVAP H+ +E++AV +P IVYGE D +G + LS IP + ++ GAGH AY++ P FH+ LL F + Sbjct: 106 ALGLKDT-PVIIISPSMSGGFSIPLLFSNPEAFKGYLPVAPVNTASHTHKEYSAVK-IPTCIVYGENDKGLGVASFRDLSNIPNKQVHVLSGAGHAAYMNSPGEFHQILLNFSE 217
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: A0A2I4D278_9TELE (alpha/beta hydrolase domain-containing protein 14B n=3 Tax=Rivulidae TaxID=28771 RepID=A0A2I4D278_9TELE) HSP 1 Score: 101 bits (251), Expect = 3.350e-24 Identity = 52/117 (44.44%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 1 MCNALGMSEANPAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDSMGTRVS-KKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFLK 348 +C L ++ P V+VSPS+SG +S+P L++ P L GYVPVAP + +AE++ +V VPALIVYG++D+ VS + LS++ ++++ GAGHP YLD+PD +H+ L +FL Sbjct: 97 VCEQLSLT---PVVVVSPSLSGMYSLPFLMQHPSLIRGYVPVAPICTEKFTAEQYQSVK-VPALIVYGDQDAQLGEVSLRNLSSLSNHKVVVMKGAGHPCYLDDPDTWHKALTDFLS 209
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: A0A3Q3GI42_9LABR (Abhydrolase domain containing 14B n=3 Tax=Labridae TaxID=8247 RepID=A0A3Q3GI42_9LABR) HSP 1 Score: 100 bits (250), Expect = 4.730e-24 Identity = 50/117 (42.74%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 1 MCNALGMSEANPAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDS-MGTRVSKKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFLK 348 +C+ L +S P V++SPS+SG +S+P L++ DL GYVPVAP + +AE++ +V VP+LIVYG++D+ +G + LS++ ++M+ GAGHP YLD+PD +H+ L +F+ Sbjct: 97 VCDQLNLS---PVVVISPSLSGMYSLPFLMQHQDLIRGYVPVAPICTDKFTAEQYQSVK-VPSLIVYGDQDAQLGELSLRNLSSLANHSVVMMKGAGHPCYLDDPDTWHKALTDFVN 209
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: UPI001E1E13FB (protein ABHD14A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1E13FB) HSP 1 Score: 97.8 bits (242), Expect = 1.320e-23 Identity = 48/109 (44.04%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 25 EANPAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDS-MGTRVSKKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFLK 348 + N VIVSPSMSG FS+P L + P G+VPVAP G+ + E++ + +P L++YGEKD +G K L +P ++ + GAGHP Y+D P+ FHE ++FLK Sbjct: 31 KLNKPVIVSPSMSGGFSLPYLFKYPGSVRGFVPVAPVGTGDFTPEDYKKLK-IPTLVIYGEKDKRLGVDSKKNLENLPVRTIVEVPGAGHPCYIDNPEFFHEFFIKFLK 138
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Match: UPI001FB83976 (protein ABHD14B n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB83976) HSP 1 Score: 99.8 bits (247), Expect = 1.330e-23 Identity = 52/116 (44.83%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 1 MCNALGMSEANPAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHSAEEFAAVTGVPALIVYGEKDS-MGTRVSKKLSAIPGSHLMMIGGAGHPAYLDEPDLFHERLLEFL 345 +C L +S P V++SPS+SG +S+P LL+ L YVPVAP + +AE++ +V VPALIVYG++D+ MG + LS +P ++++ GAGHP YLD+PD +H+ L +FL Sbjct: 97 VCEQLSLS---PVVVISPSLSGMYSLPFLLQHQALIKAYVPVAPICTEKFTAEQYGSVK-VPALIVYGDQDTQMGEASLRNLSNLPAHSVVVMKGAGHPCYLDDPDTWHKALTDFL 208 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100544.58.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100544.58.1 >prot_H-elongata_contig100544.58.1 ID=prot_H-elongata_contig100544.58.1|Name=mRNA_H-elongata_contig100544.58.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp MCNALGMSEANPAVIVSPSMSGSFSVPLLLRKPDLFAGYVPVAPGIAGEHback to top mRNA from alignment at H-elongata_contig100544:699..1073+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig100544.58.1 ID=mRNA_H-elongata_contig100544.58.1|Name=mRNA_H-elongata_contig100544.58.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=375bp|location=Sequence derived from alignment at H-elongata_contig100544:699..1073+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig100544:699..1073+ >mRNA_H-elongata_contig100544.58.1 ID=mRNA_H-elongata_contig100544.58.1|Name=mRNA_H-elongata_contig100544.58.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at H-elongata_contig100544:699..1073+ (Himanthalia elongata Himel1 dioecious)back to top |