Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 197 |
| Cds size | 195 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929547.2910998-CDS-H-elongata_contig100513:1308..1392 | 1622929547.2910998-CDS-H-elongata_contig100513:1308..1392 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100513 1309..1392 - |
| 1691679063.960638-CDS-H-elongata_contig100513:1308..1392 | 1691679063.960638-CDS-H-elongata_contig100513:1308..1392 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100513 1309..1392 - |
| 1622929547.3079069-CDS-H-elongata_contig100513:2014..2125 | 1622929547.3079069-CDS-H-elongata_contig100513:2014..2125 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100513 2015..2125 - |
| 1691679063.976474-CDS-H-elongata_contig100513:2014..2125 | 1691679063.976474-CDS-H-elongata_contig100513:2014..2125 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100513 2015..2125 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100513.54.1 >prot_H-elongata_contig100513.54.1 ID=prot_H-elongata_contig100513.54.1|Name=mRNA_H-elongata_contig100513.54.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
ISEYARYFKQAAINSKIPVFEKAATLLKGAVGQAAMKIAPNAVKAKENLN
KINTRATFIKEVRN* back to topmRNA from alignment at H-elongata_contig100513:1309..2125- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig100513.54.1 ID=mRNA_H-elongata_contig100513.54.1|Name=mRNA_H-elongata_contig100513.54.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=817bp|location=Sequence derived from alignment at H-elongata_contig100513:1309..2125- (Himanthalia elongata Himel1 dioecious)
ATATCCGAGTACGCGAGGTATTTCAAGCAAGCGGCCATCAACTCGAAGAT
CCCGGTTTTCGAAAAGGCAGCGACCCTCCTTAAAGGCGCTGTGGGCCAGG
CCGCCATGAAGGTGACCTTCCAGTGATTACCTATATAATATTAAAATCCC
CTTTTTTGGTCATTATTAGTTTTTAACAGTTACCTCGGCGAAAGCTAACT
TAATTCACTGATTGGTTGATTTATCAGATAATAAGTAAGGTGATATCAAA
ATCCAGTCCGTAGTCACAAGATAGAATTTTAAAGTATGGAAACAAAGAAA
AACAAACAAACTTTACGATCATGAAGGATTAGTAACTGGAAATCCTTCAA
AACGACACTCCCGCTACTACGCGAAAGGCGCTTTTCAGGGCGTACATGTC
ATGATGATATTTGCTTCCCCAAACTAATACTAGAACGGAGTTAGCAAAGC
TGTCGCTGAAACATTGTTCACTATATTTCATTTCTTCCACCAATCGATGT
CGTAAGAGTCATATGACGGGATCCCCGACATTAACCGTCGACTCGACCCG
ATGAATTTACCACTGGGGAACACGAATAATCATATATATATTTTGATTAT
AGTAATGTCCACATTCGAATATTCGGAGGGTTTTAATGAGTTCATACCTG
GTATATTTTAATAAAAAGCGCTCCGATACGCCCCTCCTGCTGCTGCATGC
ACACTTCGCGCTTCCCCCTTCTTCCGGGCTTAGATTGCGCCGAACGCCGT
AAAGGCGAAGGAAAACCTAAATAAAATCAATACGAGAGCAACATTTATCA
AGGAGGTCAGGAACTAG back to topCoding sequence (CDS) from alignment at H-elongata_contig100513:1309..2125- >mRNA_H-elongata_contig100513.54.1 ID=mRNA_H-elongata_contig100513.54.1|Name=mRNA_H-elongata_contig100513.54.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=390bp|location=Sequence derived from alignment at H-elongata_contig100513:1309..2125- (Himanthalia elongata Himel1 dioecious)
ATATCCGAGTACGCGAGGTATTTCAAGCAAGCGGCCATCAACTCGAAGAT
CCCGGTTTTCGAAAAGGCAGCGACCCTCCTTAAAGGCGCTGTGGGCCAGG
CCGCCATGAAGATATCCGAGTACGCGAGGTATTTCAAGCAAGCGGCCATC
AACTCGAAGATCCCGGTTTTCGAAAAGGCAGCGACCCTCCTTAAAGGCGC
TGTGGGCCAGGCCGCCATGAAGATTGCGCCGAACGCCGTAAAGGCGAAGG
AAAACCTAAATAAAATCAATACGAGAGCAACATTTATCAAGGAGGTCAGG
AACTAGATTGCGCCGAACGCCGTAAAGGCGAAGGAAAACCTAAATAAAAT
CAATACGAGAGCAACATTTATCAAGGAGGTCAGGAACTAG back to top
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