Homology
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
D8LLR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLR9_ECTSI)
HSP 1 Score: 82.0 bits (201), Expect = 1.170e-16
Identity = 42/59 (71.19%), Postives = 49/59 (83.05%), Query Frame = 1
Query: 28 QEGDTSGSTGLVVLFDGHARDLLVANTGDSRCVAS-RAGVAVLLTNDHRLNRPDERQRV 201
+EGDTSGST LVV+FDG +R +LVAN GDSRCVAS GVA L++DHRL+RPDER RV
Sbjct: 1697 KEGDTSGSTALVVVFDGRSRSILVANVGDSRCVASCGGGVAARLSSDHRLSRPDERARV 1755
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
A0A6H5JFB6_9PHAE (Aurora kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFB6_9PHAE)
HSP 1 Score: 79.7 bits (195), Expect = 7.610e-16
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 1
Query: 28 QEGDTSGSTGLVVLFDGHARDLLVANTGDSRCVAS-RAGVAVLLTNDHRLNRPDERQRV 201
QE DTSG+T LVV+FDG +R +LVAN GDSRCVAS GVA L++DHRL+RPDER RV
Sbjct: 1619 QEDDTSGATALVVVFDGRSRSILVANVGDSRCVASCGGGVATRLSSDHRLSRPDERARV 1677
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
A0A7S1YQL3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YQL3_9STRA)
HSP 1 Score: 70.1 bits (170), Expect = 1.640e-12
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 28 QEGDTSGSTGLVVLFDGHARDLLVANTGDSRCVASRAGVAVLLTNDHRLNRPDERQRV 201
QE DTSGSTGL++L D L VAN GDSRCV SR G A++LT DHR+ ER+R+
Sbjct: 308 QESDTSGSTGLIILLDSLNGKLTVANVGDSRCVLSRGGAAMVLTTDHRVTNNTERRRI 365
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
A0A7S4T8E3_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T8E3_9STRA)
HSP 1 Score: 70.1 bits (170), Expect = 1.830e-12
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 28 QEGDTSGSTGLVVLFDGHARDLLVANTGDSRCVASRAGVAVLLTNDHRLNRPDERQRV 201
QE DTSGSTGL++L D L VAN GDSRCV SR G A++LT DHR+ ER+R+
Sbjct: 456 QESDTSGSTGLIILLDSLNGKLTVANVGDSRCVLSRGGAAMVLTTDHRVTNNTERRRI 513
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
A0A7S2BV78_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BV78_9STRA)
HSP 1 Score: 68.6 bits (166), Expect = 6.430e-12
Identity = 37/63 (58.73%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 16 KITPQEGDTSGSTGLVVLFDGHARDLLVANTGDSRCVASRAGVAVLLTNDHRLN-RPDERQRV 201
++ Q D SGSTG++VLFDG L+VAN GDSRCV SR G A+ L+++HRL RPDER+RV
Sbjct: 757 QMVAQSEDESGSTGIMVLFDG--THLIVANVGDSRCVLSRGGHAIELSSEHRLTTRPDERKRV 817
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
D7MRI6_ARALL (Protein-serine/threonine phosphatase n=2 Tax=Arabidopsis TaxID=3701 RepID=D7MRI6_ARALL)
HSP 1 Score: 58.9 bits (141), Expect = 1.540e-8
Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 1 MCGGS----KITPQEGDTSGSTGLV-VLFDGHARDLLVANTGDSRCVASRAGVAVLLTNDHRLNRPDERQRV 201
+CG S P+E SGST +V VL H ++VANTGDSR V R+G+A+ L+NDH+ +RPDER R+
Sbjct: 211 VCGTSVPLCNCDPREAAISGSTAVVAVLTQDH---IVVANTGDSRAVLCRSGLAIPLSNDHKPDRPDERARI 279
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
A0A565CQF7_9BRAS (Protein-serine/threonine phosphatase n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CQF7_9BRAS)
HSP 1 Score: 58.2 bits (139), Expect = 2.880e-8
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 25 PQEGDTSGSTGLV-VLFDGHARDLLVANTGDSRCVASRAGVAVLLTNDHRLNRPDERQRV 201
P+E SGST + VL H ++VANTGDSR V R+GVAV L+NDH+ +RPDER R+
Sbjct: 210 PREAAISGSTAVAAVLTQEH---IIVANTGDSRAVLCRSGVAVPLSNDHKPDRPDERARI 266
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
UPI00063AFCFE (probable protein phosphatase 2C 8 n=1 Tax=Gossypium raimondii TaxID=29730 RepID=UPI00063AFCFE)
HSP 1 Score: 56.2 bits (134), Expect = 9.760e-8
Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 4 CGGSKITPQEGDTSGSTGLVVLFDGHARDLLVANTGDSRCVASRAGVAVLLTNDHRLNRPDERQRV 201
CG + + +T GS +V+L +++VAN GDSR V RAG AV L++DH+L+RPDE +RV
Sbjct: 60 CGTTAAVDEVMETMGSMAVVMLVS--REEVVVANCGDSRAVLCRAGTAVALSHDHKLDRPDEWERV 123
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
A0A087GA83_ARAAL (Protein-serine/threonine phosphatase n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087GA83_ARAAL)
HSP 1 Score: 56.6 bits (135), Expect = 1.010e-7
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 25 PQEGDTSGSTGLV-VLFDGHARDLLVANTGDSRCVASRAGVAVLLTNDHRLNRPDERQRV 201
P+E SGST + VL H ++VANTGDSR V R+GVA+ L+NDH+ +RPDER R+
Sbjct: 210 PREVAISGSTAVTAVLTQEH---IIVANTGDSRAVLCRSGVAIPLSNDHKPDRPDERARI 266
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Match:
P2C75_ARATH (Probable protein phosphatase 2C 75 n=8 Tax=Camelineae TaxID=980083 RepID=P2C75_ARATH)
HSP 1 Score: 56.2 bits (134), Expect = 1.380e-7
Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 1 MCGGS----KITPQEGDTSGSTGLV-VLFDGHARDLLVANTGDSRCVASRAGVAVLLTNDHRLNRPDERQRV 201
+CG S P+E SGST + VL H ++VANTGDSR V R G+A+ L+NDH+ +RPDER R+
Sbjct: 212 VCGTSVPLCNCDPREAAISGSTAVTAVLTHDH---IIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDERARI 280
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100511.52.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.17e-16 / Id = 71.19 Expect = 7.61e-16 / Id = 69.49 Expect = 1.64e-12 / Id = 58.62 Expect = 1.83e-12 / Id = 58.62 Expect = 6.43e-12 / Id = 58.73 Expect = 1.54e-8 / Id = 48.61 Expect = 2.88e-8 / Id = 55.00 Expect = 9.76e-8 / Id = 45.45 Expect = 1.01e-7 / Id = 53.33 Expect = 1.38e-7 / Id = 47.22 Sequence D8LLR9_ECTSI A0A6H5JFB6_9PHAE A0A7S1YQL3_9STRA A0A7S4T8E3_9STRA A0A7S2BV78_9STRA D7MRI6_ARALL A0A565CQF7_9BRAS UPI00063AFCFE A0A087GA83_ARAAL P2C75_ARATH Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 81.6 Seed ortholog evalue 1.5e-13 Seed eggNOG ortholog 2880.D8LLR9 Preferred name spnA KEGG ko ko:K01090,ko:K07359,ko:K14803,ko:K17500 KEGG Pathway ko04140,ko04152,ko04211,ko04920,ko04921,ko05034,map04140,map04152,map04211,map04920,map04921,map05034 GOs GO:0000166,GO:0000287,GO:0001101,GO:0001726,GO:0001882,GO:0001883,GO:0002682,GO:0002697,GO:0002831,GO:0003674,GO:0003824,GO:0004721,GO:0004722,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009414,GO:0009415,GO:0009628,GO:0009651,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010556,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0019001,GO:0019219,GO:0019222,GO:0019538,GO:0030145,GO:0030154,GO:0031252,GO:0031323,GO:0031326,GO:0031347,GO:0032101,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033554,GO:0033993,GO:0035639,GO:0036094,GO:0036211,GO:0042221,GO:0042578,GO:0042995,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043618,GO:0043620,GO:0043900,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048583,GO:0048856,GO:0048869,GO:0050688,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061392,GO:0061416,GO:0065007,GO:0071214,GO:0071470,GO:0071472,GO:0071704,GO:0080090,GO:0080134,GO:0097159,GO:0097305,GO:0097367,GO:0104004,GO:0120025,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901700,GO:1903506,GO:2000112,GO:2001141 EggNOG free text desc. peptidyl-threonine phosphorylation EggNOG OGs COG0631@1,KOG0585@1,KOG0585@2759,KOG0698@2759 EC 2.7.11.17,3.1.3.16 COG Functional cat. T Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko01001,ko01009,ko03009 Hectar predicted targeting category other localisation Exons 1 Model size 201 Cds size 201 Stop 0 Start 1
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622929547.16958-CDS-H-elongata_contig100511:276..477 1622929547.16958-CDS-H-elongata_contig100511:276..477 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig100511 277..477 - 1691679063.8815122-CDS-H-elongata_contig100511:276..477 1691679063.8815122-CDS-H-elongata_contig100511:276..477 Himanthalia elongata Himel1 dioecious CDS H-elongata_contig100511 277..477 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100511.52.1
>prot_H-elongata_contig100511.52.1 ID=prot_H-elongata_contig100511.52.1|Name=mRNA_H-elongata_contig100511.52.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
MCGGSKITPQEGDTSGSTGLVVLFDGHARDLLVANTGDSRCVASRAGVAV back to top mRNA from alignment at H-elongata_contig100511:277..477-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig100511.52.1 ID=mRNA_H-elongata_contig100511.52.1|Name=mRNA_H-elongata_contig100511.52.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=201bp|location=Sequence derived from alignment at H-elongata_contig100511:277..477- (Himanthalia elongata Himel1 dioecious)ATGTGTGGTGGATCGAAAATAACCCCACAGGAAGGCGACACGAGTGGATC
GACGGGACTCGTGGTCCTATTTGACGGCCACGCGCGCGATCTGCTGGTCG
CGAACACTGGTGACTCTCGCTGCGTCGCCAGCAGGGCGGGTGTGGCGGTG
CTGTTGACCAACGACCATCGACTGAATCGTCCCGACGAGCGGCAGCGCGT
A back to top Coding sequence (CDS) from alignment at H-elongata_contig100511:277..477-
>mRNA_H-elongata_contig100511.52.1 ID=mRNA_H-elongata_contig100511.52.1|Name=mRNA_H-elongata_contig100511.52.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=402bp|location=Sequence derived from alignment at H-elongata_contig100511:277..477- (Himanthalia elongata Himel1 dioecious) back to top