mRNA_H-elongata_contig10045.46.1 (mRNA) Himanthalia elongata Himel1 dioecious
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 5.720e-24 Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 1 Query: 1 LDWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIITKNHNNL 147 LDWWRVRC +FPHLANLARRVLAIPATQAESERLFSCAGNI+TKN NNL Sbjct: 224 LDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNL 272
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 1.920e-16 Identity = 37/41 (90.24%), Postives = 40/41 (97.56%), Query Frame = 1 Query: 25 TNFPHLANLARRVLAIPATQAESERLFSCAGNIITKNHNNL 147 T+FPHLANLARRVLAIPATQA+SERLFSCAGNI+TKN NNL Sbjct: 152 TDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNL 192
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: A0A015I940_RHIIW (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015I940_RHIIW) HSP 1 Score: 67.0 bits (162), Expect = 1.030e-11 Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 1 Query: 1 LDWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIITKNHNNL 147 LDWWR+R NFP LA LAR+ LAIPAT SERLFS AGN+I+ +L Sbjct: 662 LDWWRIRSQNFPKLAKLARKYLAIPATSVSSERLFSDAGNLISAKRTSL 710
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: U9UP26_RHIID (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9UP26_RHIID) HSP 1 Score: 62.8 bits (151), Expect = 1.030e-11 Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 1 Query: 1 LDWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIITKNHNNL 147 LDWW++ NFP LA LAR+ LAIPAT SERLFS AGN+I+ NL Sbjct: 16 LDWWQICFQNFPKLAKLARKYLAIPATSVSSERLFSNAGNVISVKRINL 64
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 64.3 bits (155), Expect = 9.150e-11 Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 1 Query: 1 LDWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIITK 132 L+WWRV+ +P LA+LARRVL IPA QA+SER+FS AG ++TK Sbjct: 481 LEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTK 524
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: UPI0011C102C8 (zinc finger BED domain-containing protein 1-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C102C8) HSP 1 Score: 63.5 bits (153), Expect = 1.210e-10 Identity = 27/43 (62.79%), Postives = 33/43 (76.74%), Query Frame = 1 Query: 1 LDWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIIT 129 L+WWR+ TNFP LANLA++ + IPAT A SER FS GNI+T Sbjct: 222 LEWWRLHQTNFPRLANLAKKYICIPATSAPSERAFSTGGNIVT 264
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: A0A1X7SR93_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SR93_AMPQE) HSP 1 Score: 60.8 bits (146), Expect = 1.780e-10 Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 1 Query: 4 DWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIITKNHNNL 147 +WWR FPHL+++AR++L IPAT SER+FS AG I+TK NL Sbjct: 70 EWWRKNQEMFPHLSDIARKLLCIPATSVPSERIFSVAGGIVTKKRTNL 117
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: A0A669CH32_ORENI (BED-type domain-containing protein n=4 Tax=Ovalentaria TaxID=1489908 RepID=A0A669CH32_ORENI) HSP 1 Score: 62.4 bits (150), Expect = 4.360e-10 Identity = 28/44 (63.64%), Postives = 32/44 (72.73%), Query Frame = 1 Query: 1 LDWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIITK 132 L WW+ T FP LANLA+ LA+PAT SERLFS AGNI+TK Sbjct: 564 LTWWKNNATRFPTLANLAKSYLAVPATSTPSERLFSVAGNIVTK 607
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: UPI00077D09EE (zinc finger BED domain-containing protein 1-like n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=UPI00077D09EE) HSP 1 Score: 60.8 bits (146), Expect = 7.570e-10 Identity = 28/44 (63.64%), Postives = 32/44 (72.73%), Query Frame = 1 Query: 1 LDWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIITK 132 L WW+ T FP LA LA+ LA+PAT A SERLFS AGNI+TK Sbjct: 165 LTWWKNNATRFPTLATLAKSYLAVPATWAPSERLFSVAGNIVTK 208
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Match: C7ZQR5_FUSV7 (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Fusarium vanettenii (strain ATCC MYA-4622 / CBS 123669 / FGSC 9596 / NRRL 45880 / 77-13-4) TaxID=660122 RepID=C7ZQR5_FUSV7) HSP 1 Score: 57.4 bits (137), Expect = 7.780e-10 Identity = 27/49 (55.10%), Postives = 33/49 (67.35%), Query Frame = 1 Query: 1 LDWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIITKNHNNL 147 L WW+ FP L+ LARR LAIPAT A ER+FS + NIIT+N N + Sbjct: 1 LIWWKSNSNRFPILSILARRYLAIPATSASIERIFSISSNIITRNRNRI 49 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig10045.46.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig10045.46.1 >prot_H-elongata_contig10045.46.1 ID=prot_H-elongata_contig10045.46.1|Name=mRNA_H-elongata_contig10045.46.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=49bp LDWWRVRCTNFPHLANLARRVLAIPATQAESERLFSCAGNIITKNHNNLback to top mRNA from alignment at H-elongata_contig10045:1243..1389+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig10045.46.1 ID=mRNA_H-elongata_contig10045.46.1|Name=mRNA_H-elongata_contig10045.46.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=147bp|location=Sequence derived from alignment at H-elongata_contig10045:1243..1389+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig10045:1243..1389+ >mRNA_H-elongata_contig10045.46.1 ID=mRNA_H-elongata_contig10045.46.1|Name=mRNA_H-elongata_contig10045.46.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=294bp|location=Sequence derived from alignment at H-elongata_contig10045:1243..1389+ (Himanthalia elongata Himel1 dioecious)back to top |