Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 3 |
| Model size | 400 |
| Cds size | 399 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622929546.400445-CDS-H-elongata_contig100382:1412..1472 | 1622929546.400445-CDS-H-elongata_contig100382:1412..1472 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100382 1413..1472 - |
| 1691679063.4168024-CDS-H-elongata_contig100382:1412..1472 | 1691679063.4168024-CDS-H-elongata_contig100382:1412..1472 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100382 1413..1472 - |
| 1622929546.4173129-CDS-H-elongata_contig100382:1659..1864 | 1622929546.4173129-CDS-H-elongata_contig100382:1659..1864 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100382 1660..1864 - |
| 1691679063.424379-CDS-H-elongata_contig100382:1659..1864 | 1691679063.424379-CDS-H-elongata_contig100382:1659..1864 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100382 1660..1864 - |
| 1622929546.4325225-CDS-H-elongata_contig100382:2205..2339 | 1622929546.4325225-CDS-H-elongata_contig100382:2205..2339 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100382 2206..2339 - |
| 1691679063.4345064-CDS-H-elongata_contig100382:2205..2339 | 1691679063.4345064-CDS-H-elongata_contig100382:2205..2339 | Himanthalia elongata Himel1 dioecious | CDS | H-elongata_contig100382 2206..2339 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig100382.41.1 >prot_H-elongata_contig100382.41.1 ID=prot_H-elongata_contig100382.41.1|Name=mRNA_H-elongata_contig100382.41.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
WRGAAALAFYRKQIGAVISVQSRWRCALAVTEYRRTISAVQTIQMWWRLK
QNEATACTAIAAWWRSVRGVERFRRTRDIVVALQSIVRGRRARREVGALG
RRFSRYKAAKMIQAALRGMSVRRAACRQIAVAR back to topmRNA from alignment at H-elongata_contig100382:1412..2339- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-elongata_contig100382.41.1 ID=mRNA_H-elongata_contig100382.41.1|Name=mRNA_H-elongata_contig100382.41.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=928bp|location=Sequence derived from alignment at H-elongata_contig100382:1412..2339- (Himanthalia elongata Himel1 dioecious)
TGGCGTGGCGCAGCTGCCTTGGCGTTCTATCGCAAACAGATCGGCGCCGT
CATTTCCGTTCAGTCCAGGTGGAGATGTGCTCTGGCGGTTACGGAATATC
GCCGAACAATCTCTGCCGTACAAACGATCCAGATGTAAGTGTGTTTTACA
TGTCCGTTTCGAAGATGGCGAGAAAAACACAATTTGTTTTTTCTAATGAT
CAGCAACCAATTCAAGGTCAAATCACAATTTTTCTCCTGCTAATGCATTT
GGTACCTTATTGAAAGGTTATAACATGTGACATTAATTCGTTTCATTTTA
GGATATCTTACCTTAAATAGTTCTACTAATTTCTTTTTTGCCGAACCTCA
TTTTAAGTCGTCATGAAGTTAGATAATTCCACTTTTCACCGTCTCATTGA
AGGCCCAAAATTCCATGGACTTCGTTTTTCTTTTTGTCAATATTTTTGTC
ATTGCTTCTTAACGTACGTGTATAGGTGGTGGCGATTGAAACAAAACGAA
GCCACTGCATGCACGGCAATCGCTGCATGGTGGCGTTCTGTGCGCGGCGT
AGAGCGATTTCGCCGGACGCGCGATATCGTCGTGGCCCTTCAGAGCATCG
TTCGTGGTAGGCGCGCTCGGCGAGAGGTTGGCGCCCTCGGCCGTCGTTTC
TCGAGATACAAGGCCGCGAAGATGATCCAGGTGCACGCACGCTGACGTAG
GTGTCCGTTTTTGGTCTGATGCATTAGGATGGTACACCCCATAGTACTTC
CGAGAGCATTTACAGTACATCGCTGGGCAGAGAACCGTACCTCCGCTAAA
TGGCAGTTAGCTTTGTTTGATTCTAATTTTTCACATTTTTCGTACTCCAA
AATGTTGTCTTGTTCAGGCGGCGTTGCGAGGAATGTCTGTGAGACGCGCA
GCGTGCCGTCAAATAGCGGTCGCCCGAG back to topCoding sequence (CDS) from alignment at H-elongata_contig100382:1412..2339- >mRNA_H-elongata_contig100382.41.1 ID=mRNA_H-elongata_contig100382.41.1|Name=mRNA_H-elongata_contig100382.41.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=798bp|location=Sequence derived from alignment at H-elongata_contig100382:1412..2339- (Himanthalia elongata Himel1 dioecious)
TGGCGTGGCGCAGCTGCCTTGGCGTTCTATCGCAAACAGATCGGCGCCGT
CATTTCCGTTCAGTCCAGGTGGAGATGTGCTCTGGCGGTTACGGAATATC
GCCGAACAATCTCTGCCGTACAAACGATCCAGATTGGCGTGGCGCAGCTG
CCTTGGCGTTCTATCGCAAACAGATCGGCGCCGTCATTTCCGTTCAGTCC
AGGTGGAGATGTGCTCTGGCGGTTACGGAATATCGCCGAACAATCTCTGC
CGTACAAACGATCCAGATGTGGTGGCGATTGAAACAAAACGAAGCCACTG
CATGCACGGCAATCGCTGCATGGTGGCGTTCTGTGCGCGGCGTAGAGCGA
TTTCGCCGGACGCGCGATATCGTCGTGGCCCTTCAGAGCATCGTTCGTGG
TAGGCGCGCTCGGCGAGAGGTTGGCGCCCTCGGCCGTCGTTTCTCGAGAT
ACAAGGCCGCGAAGATGATCCAGGTGGTGGCGATTGAAACAAAACGAAGC
CACTGCATGCACGGCAATCGCTGCATGGTGGCGTTCTGTGCGCGGCGTAG
AGCGATTTCGCCGGACGCGCGATATCGTCGTGGCCCTTCAGAGCATCGTT
CGTGGTAGGCGCGCTCGGCGAGAGGTTGGCGCCCTCGGCCGTCGTTTCTC
GAGATACAAGGCCGCGAAGATGATCCAGGCGGCGTTGCGAGGAATGTCTG
TGAGACGCGCAGCGTGCCGTCAAATAGCGGTCGCCCGAGCGGCGTTGCGA
GGAATGTCTGTGAGACGCGCAGCGTGCCGTCAAATAGCGGTCGCCCGA back to top
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