mRNA_H-elongata_contig100241.31.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig100241.31.1
Unique NamemRNA_H-elongata_contig100241.31.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: G1KHR5_ANOCA (Dopa decarboxylase n=2 Tax=Iguania TaxID=8511 RepID=G1KHR5_ANOCA)

HSP 1 Score: 193 bits (491), Expect = 1.090e-56
Identity = 87/154 (56.49%), Postives = 113/154 (73.38%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 462
            +   YAGS+ +CPE R++LDGVE ADSF FN HKWLL  FDC+AMWVK+ + L  A  I P YLK    E G ++D+R+WQ+PL R+FRSLK+WF++R +G+  ++ +IR  I+LA E K+LV+QDDRFEI A    GL+CFRLKGSN   EEL
Sbjct:  270 IDAAYAGSSFICPEFRYLLDGVEFADSFNFNAHKWLLVNFDCSAMWVKKRSDLTRAFKIDPIYLKHGYEESGHITDYRHWQIPLGRRFRSLKLWFVLRMYGVKGLQEYIRKHIKLAHEFKDLVLQDDRFEICADVIMGLVCFRLKGSNKLNEEL 423
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A6J0UMC1_9SAUR (aromatic-L-amino-acid decarboxylase n=1 Tax=Pogona vitticeps TaxID=103695 RepID=A0A6J0UMC1_9SAUR)

HSP 1 Score: 191 bits (485), Expect = 3.010e-56
Identity = 85/154 (55.19%), Postives = 111/154 (72.08%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 462
            +   YAGSA +CPE R++L+GVE ADSF FN HKWLL  FDC+ MWVK+ + L+ A  I P YLK    E G ++D+R+WQ+PL R+FRSLK+WF+ R +G+  ++ HIR  ++LA E K+LV+QDDRFEI A    GL+CFRLKGSN   E L
Sbjct:  222 IDAAYAGSAFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSVMWVKKRSDLICAFKIDPVYLKHDHQESGLITDYRHWQIPLGRRFRSLKLWFVFRMYGVKGLQEHIRKHVKLAHEFKDLVLQDDRFEICADVILGLVCFRLKGSNELNEAL 375
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A8D2JFL1_VARKO (Dopa decarboxylase n=7 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2JFL1_VARKO)

HSP 1 Score: 191 bits (484), Expect = 1.220e-55
Identity = 86/158 (54.43%), Postives = 112/158 (70.89%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEELRRVT 474
            +   YAGS+ +CPE R++L+GVE ADSF FN HKWLL  FDC+AMWVK  + L     I P YLK +  E G ++D+R+WQ+PL R+FRSLK+WF+ R +G+  ++ HIR  ++LA E KELV+QDDRFEI A    GL+CFRLKGSN   E L + T
Sbjct:  270 IDAAYAGSSFICPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKNRSDLTSTFKIDPLYLKHEHEESGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQEHIRKHVKLAHEFKELVLQDDRFEICAEVILGLVCFRLKGSNELNEALLQST 427
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A852JEU3_9PICI (DDC decarboxylase (Fragment) n=1 Tax=Tricholaema leucomelas TaxID=240729 RepID=A0A852JEU3_9PICI)

HSP 1 Score: 184 bits (468), Expect = 3.210e-55
Identity = 83/154 (53.90%), Postives = 109/154 (70.78%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 462
            +   YAGSA +CPE R  L+GVE ADSF FN HKWLL  FDC+AMWVK+   L+ A  + P YL+    E G V+D+R+WQ+PL R+FRSLK+WF++R +G+T ++ HIR  ++LA   + LV+QD+RFEI A    GL+CFRLKGSN   E L
Sbjct:   81 IDAAYAGSAFICPEFRQFLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRLDLISAFKLEPLYLQHHHQESGLVTDYRHWQIPLGRRFRSLKLWFVLRMYGVTGLQQHIRKHVKLAHLFEHLVLQDERFEICAEVVLGLVCFRLKGSNKLNEAL 234
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A7L0ZJU5_9PASS (DDC decarboxylase (Fragment) n=5 Tax=Neognathae TaxID=8825 RepID=A0A7L0ZJU5_9PASS)

HSP 1 Score: 184 bits (467), Expect = 4.420e-55
Identity = 81/154 (52.60%), Postives = 111/154 (72.08%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 462
            +   YAGSA +CPE R +L+GVE ADSF FN HKWLL  FDC+AMWVK+ + L+ A  + P YL+    E G V+D+R+WQ+PL R+FRSLK+WF++R +G+  ++ HIR  ++L+ + + LV+QD+RFEI A    GL+CFRLKGSN   E L
Sbjct:   80 IDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRSDLIGAFKLEPLYLQHHHQESGLVTDYRHWQIPLGRRFRSLKLWFVLRMYGVKGLQEHIRKHVRLSHQFEHLVLQDERFEICAEVVLGLVCFRLKGSNKLNEAL 233
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A093C790_9AVES (Aromatic-L-amino-acid decarboxylase (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A093C790_9AVES)

HSP 1 Score: 184 bits (466), Expect = 6.250e-55
Identity = 81/154 (52.60%), Postives = 111/154 (72.08%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 462
            +   YAGSA +CPE R +L+GVE ADSF FN HKWLL  FDC+AMWVK+ + L+ A  + P YL+    E G V+D+R+WQ+PL R+FRSLK+WF++R +G+T ++ HIR  ++L+ + + LV QD+RFEI A    GL+CFRLKGSN   + L
Sbjct:   80 IDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRSDLIGAFKLEPLYLQHHHQESGLVTDYRHWQIPLGRRFRSLKLWFVLRMYGVTGLQEHIRKHVRLSHQFEHLVRQDERFEICAEVVLGLVCFRLKGSNELNKAL 233
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A7L1NWF1_RHICY (DDC decarboxylase (Fragment) n=1 Tax=Rhinopomastus cyanomelas TaxID=113115 RepID=A0A7L1NWF1_RHICY)

HSP 1 Score: 182 bits (461), Expect = 8.900e-55
Identity = 78/154 (50.65%), Postives = 112/154 (72.73%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 462
            +   YAGSA +CPE R +L+GVE ADSF FN HKWLL  FDC+AMWVK  + +++A  + P YL+    E G ++D+R+WQ+PL R+FRSLK+WF++R +G+  ++ HIR  ++L+ + + LV+QD+RFEI+A    GL+CFRLKGSN   + L
Sbjct:   32 IDAAYAGSAFICPEFRHLLNGVEFADSFDFNPHKWLLVNFDCSAMWVKNRSDIINAFKLEPVYLQHDHQESGLITDYRHWQIPLGRRFRSLKLWFVLRMYGVRGLQEHIRKHVRLSHQFEHLVLQDERFEISAEVILGLVCFRLKGSNELNKAL 185
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: A0A5Q4EML6_9BACT (Aspartate aminotransferase family protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A5Q4EML6_9BACT)

HSP 1 Score: 187 bits (476), Expect = 1.790e-54
Identity = 85/156 (54.49%), Postives = 110/156 (70.51%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEELRR 468
            +   YAG+  VCPE RWI+DGVEHADSF FN HKWLL  FDC+A WV   A L+ ALSITPEYL++   + G V D+R+WQ+PL R+FRSLK+WF++R +G+  +R  IRH + LAE  + LV  D+RFEI AP    L+CFRL+  +  + EL R
Sbjct:  265 VDAAYAGAMCVCPEYRWIIDGVEHADSFVFNPHKWLLTNFDCSAFWVADRADLLGALSITPEYLRNAASDAGAVIDYRDWQIPLGRRFRSLKLWFVIRHYGVEGLREFIRHHLGLAELFESLVRSDERFEICAPRTTSLVCFRLRAGDEPSRELLR 420
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: UPI000C756523 (aromatic-L-amino-acid decarboxylase-like isoform X1 n=2 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C756523)

HSP 1 Score: 187 bits (475), Expect = 2.220e-54
Identity = 81/156 (51.92%), Postives = 112/156 (71.79%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEELRR 468
            +   YAGS+ +CPE R +LDGVE A+SF FN HKW+L  FDC+AMW+K S  +VDA ++ P YL+ +   QG++ D+R+W +PL R+FRSLKIWF+MR +GL  +R HIR  ++LA +  E+V  D RFE+  PPR GL+CFR+K SN   E+L +
Sbjct:  264 VDAAYAGSSFICPEFRPLLDGVEFAESFNFNPHKWMLVNFDCSAMWIKDSRKIVDAFNVDPLYLQHRH--QGEIPDYRHWHIPLGRRFRSLKIWFVMRIYGLEGLRKHIREQVELANQFAEIVQTDPRFELPTPPRMGLVCFRVKASNVVNEKLNK 417
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BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Match: UPI0020263C1D (aromatic-L-amino-acid decarboxylase n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI0020263C1D)

HSP 1 Score: 187 bits (474), Expect = 3.680e-54
Identity = 84/154 (54.55%), Postives = 108/154 (70.13%), Query Frame = 1 
Query:    1 LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRSAFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAFGLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAATEEL 462
            +   YAGS+ VCPE R++L+GVE ADSF FN HKWLL  FDC+ MWVK+   L  A  I P YLK    E G ++D+R+WQ+PL R+FRSLK+WF+ R +G+  ++ HIR  ++LA E K+LV+QDDRFEI A    GL+CFRLKG N   E L
Sbjct:  270 IDAAYAGSSFVCPEFRYLLNGVEFADSFNFNPHKWLLVNFDCSTMWVKKRTDLTCAFKIDPVYLKHDHQESGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQEHIRKHVKLAHEFKDLVLQDDRFEICADVVLGLVCFRLKGKNELNEAL 423
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100241.31.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G1KHR5_ANOCA1.090e-5656.49Dopa decarboxylase n=2 Tax=Iguania TaxID=8511 RepI... [more]
A0A6J0UMC1_9SAUR3.010e-5655.19aromatic-L-amino-acid decarboxylase n=1 Tax=Pogona... [more]
A0A8D2JFL1_VARKO1.220e-5554.43Dopa decarboxylase n=7 Tax=Varanus komodoensis Tax... [more]
A0A852JEU3_9PICI3.210e-5553.90DDC decarboxylase (Fragment) n=1 Tax=Tricholaema l... [more]
A0A7L0ZJU5_9PASS4.420e-5552.60DDC decarboxylase (Fragment) n=5 Tax=Neognathae Ta... [more]
A0A093C790_9AVES6.250e-5552.60Aromatic-L-amino-acid decarboxylase (Fragment) n=2... [more]
A0A7L1NWF1_RHICY8.900e-5550.65DDC decarboxylase (Fragment) n=1 Tax=Rhinopomastus... [more]
A0A5Q4EML6_9BACT1.790e-5454.49Aspartate aminotransferase family protein n=1 Tax=... [more]
UPI000C7565232.220e-5451.92aromatic-L-amino-acid decarboxylase-like isoform X... [more]
UPI0020263C1D3.680e-5454.55aromatic-L-amino-acid decarboxylase n=1 Tax=Sphaer... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100241contigH-elongata_contig100241:250..2220 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score196.1
Seed ortholog evalue1.3e-47
Seed eggNOG ortholog28377.ENSACAP00000008240
Preferred nameDDC
KEGG rclassRC00299
KEGG koko:K01590,ko:K01593
KEGG ReactionR00685,R00699,R00736,R01167,R02080,R02701,R04909
KEGG Pathwayko00340,ko00350,ko00360,ko00380,ko00901,ko00950,ko00965,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00340,map00350,map00360,map00380,map00901,map00950,map00965,map01100,map01110,map04726,map04728,map05030,map05031,map05034
KEGG ModuleM00037,M00042
GOsGO:0000003,GO:0001505,GO:0003008,GO:0003674,GO:0003824,GO:0004058,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006568,GO:0006570,GO:0006576,GO:0006584,GO:0006585,GO:0006586,GO:0006587,GO:0006725,GO:0006807,GO:0006810,GO:0006836,GO:0006950,GO:0007275,GO:0007444,GO:0007562,GO:0007564,GO:0007568,GO:0007591,GO:0007593,GO:0007610,GO:0007611,GO:0007613,GO:0007615,GO:0007616,GO:0007617,GO:0007618,GO:0007619,GO:0007622,GO:0007623,GO:0008021,GO:0008062,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009266,GO:0009308,GO:0009309,GO:0009404,GO:0009605,GO:0009611,GO:0009628,GO:0009636,GO:0009712,GO:0009713,GO:0009719,GO:0009820,GO:0009888,GO:0009987,GO:0010033,GO:0010243,GO:0010259,GO:0012505,GO:0015837,GO:0015842,GO:0016597,GO:0016829,GO:0016830,GO:0016831,GO:0017085,GO:0017144,GO:0018130,GO:0018958,GO:0019098,GO:0019438,GO:0019748,GO:0019752,GO:0019842,GO:0019899,GO:0019904,GO:0019953,GO:0021700,GO:0022404,GO:0022414,GO:0030133,GO:0030170,GO:0030424,GO:0031406,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032504,GO:0033076,GO:0034641,GO:0035220,GO:0035295,GO:0035690,GO:0036094,GO:0036468,GO:0036477,GO:0040007,GO:0040011,GO:0040040,GO:0042133,GO:0042136,GO:0042221,GO:0042303,GO:0042330,GO:0042335,GO:0042401,GO:0042416,GO:0042417,GO:0042423,GO:0042427,GO:0042428,GO:0042430,GO:0042435,GO:0042493,GO:0042995,GO:0043005,GO:0043025,GO:0043052,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043279,GO:0043436,GO:0043473,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044297,GO:0044424,GO:0044444,GO:0044456,GO:0044464,GO:0044703,GO:0045202,GO:0046189,GO:0046219,GO:0046483,GO:0046684,GO:0048037,GO:0048066,GO:0048067,GO:0048070,GO:0048079,GO:0048082,GO:0048085,GO:0048511,GO:0048512,GO:0048513,GO:0048609,GO:0048731,GO:0048856,GO:0050662,GO:0050789,GO:0050793,GO:0050877,GO:0050890,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0052314,GO:0060429,GO:0065007,GO:0065008,GO:0070279,GO:0070382,GO:0070848,GO:0070887,GO:0071310,GO:0071312,GO:0071363,GO:0071417,GO:0071495,GO:0071684,GO:0071702,GO:0071704,GO:0071705,GO:0097159,GO:0097164,GO:0097458,GO:0097708,GO:0098700,GO:0098793,GO:0099503,GO:0099504,GO:0120025,GO:1901160,GO:1901162,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901615,GO:1901617,GO:1901698,GO:1901699,GO:2000026
EggNOG free text desc.L-dopa decarboxylase activity
EggNOG OGs38EZZ@33154,3B9Z3@33208,3CSPZ@33213,481AM@7711,48Y66@7742,COG0076@1,KOG0628@2759
EC4.1.1.105,4.1.1.22,4.1.1.28
COG Functional cat.E
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons4
Model size492
Cds size492
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100241.31.1prot_H-elongata_contig100241.31.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig100241 250..2220 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929545.072538-CDS-H-elongata_contig100241:249..3581622929545.072538-CDS-H-elongata_contig100241:249..358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100241 250..358 -
1691679062.8981035-CDS-H-elongata_contig100241:249..3581691679062.8981035-CDS-H-elongata_contig100241:249..358Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100241 250..358 -
1622929545.1759536-CDS-H-elongata_contig100241:784..9241622929545.1759536-CDS-H-elongata_contig100241:784..924Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100241 785..924 -
1691679062.9111032-CDS-H-elongata_contig100241:784..9241691679062.9111032-CDS-H-elongata_contig100241:784..924Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100241 785..924 -
1622929545.2019627-CDS-H-elongata_contig100241:1722..18611622929545.2019627-CDS-H-elongata_contig100241:1722..1861Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100241 1723..1861 -
1691679062.9266384-CDS-H-elongata_contig100241:1722..18611691679062.9266384-CDS-H-elongata_contig100241:1722..1861Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100241 1723..1861 -
1622929545.219801-CDS-H-elongata_contig100241:2116..22201622929545.219801-CDS-H-elongata_contig100241:2116..2220Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100241 2117..2220 -
1691679062.933938-CDS-H-elongata_contig100241:2116..22201691679062.933938-CDS-H-elongata_contig100241:2116..2220Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig100241 2117..2220 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig100241.31.1

>prot_H-elongata_contig100241.31.1 ID=prot_H-elongata_contig100241.31.1|Name=mRNA_H-elongata_contig100241.31.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
LQCKYAGSAAVCPENRWILDGVEHADSFTFNLHKWLLATFDCNAMWVKRS
AFLVDALSITPEYLKSKEYEQGQVSDFRNWQVPLSRKFRSLKIWFIMRAF
GLTKIRNHIRHGIQLAEELKELVMQDDRFEIAAPPRFGLICFRLKGSNAA
TEELRRVTLPVAE*
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mRNA from alignment at H-elongata_contig100241:250..2220-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig100241.31.1 ID=mRNA_H-elongata_contig100241.31.1|Name=mRNA_H-elongata_contig100241.31.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1971bp|location=Sequence derived from alignment at H-elongata_contig100241:250..2220- (Himanthalia elongata Himel1 dioecious)
CTCCAATGCAAGTATGCTGGATCGGCCGCTGTGTGCCCGGAGAACCGGTG
GATCTTGGACGGTGTTGAGCACGCCGATAGTTTCACATTCAACTTGCACA
AGTGGTAAGGTTTCGTTTACTCCTCCCATCGTTCGACGATTTTTTGCTCT
TGATGCGCTAGTTCGCTTGCTCAAATATCTCCTATTAGACTTGAAGGCTT
CGTAGCTTTTGCCACATCGCGACCCTTGATATTGCTGCAAATCCACAACG
GATGTATAAAAATAATCATCATTATATGCACCCTCATGACCCGCTGCTCC
GCTATGCCTCCTCCCTGGCACTACTACTGTACTGCATTATGTACTTACCT
GGCTGACAGGCTATTGGCGACCTTTGACTGTAACGCCATGTGGGTAAAGC
GGAGCGCCTTTCTGGTCGACGCGCTCTCGATCACCCCGGAGTACTTGAAA
TCCAAAGAGTACGAGCAAGGGCAGGTGTCTGACTTTAGGAACTGGCAGGT
GCGACCAACATTATCCGACCAACTCATCGGTGCTTCACCGAGAGATGCCT
AGTACTGTCGTCGAAAACCACCACCGGAACTCTTGGCAGCACTGGCGTGG
CTATACGGCATCTGGGTCGGGTCTCGCTGCGTCGTCCAACATAACATACA
ACCATATAGGACCAACAGAAGAAGCAGTTCCGCTGCGGAGCACGGAGTCG
TGCACTTCGACATTTGCCTTTTTTTTGTAGAGACACGGACATCTTAAACC
ATTGCGCGAAGAGAAAACTTATCTTCTTACCAAGATAACGTTTTTAGTTT
GTGCTCGATCGCGGGGGATCTTTTTTCAATGCGTACGTACATGTAGTGAA
ATGTTCGCGTCGAGAACGCCCCACCCCGGAAGGAAGGGAATCCCCCACTC
CCCAAGCCCCAATTTTATCTACATCGACACAACTCCGCCAAACACGCGAC
CTCGTTGACGTTACTTTTCCGTACATTTGCCATGTCTGTAATATTTATCC
CTCCACGCAATGTTTTGTATTTCTTCATTGCTTTTCATGTTTAGCAAACC
ACAAGGGGTGCTGGGATTAGGCCCAATTGGCATAATGTGAGAACAACAAT
AACAATTCGCGGCAATTACGAGAAAAAGTGTTGAGGGGGCTTTAATTTCC
CAACTAACGCTAATTGTTCCAAAGTGATTTACCAATTAGATTGGTGGCTA
ATGGGGTGGTCTTCAAAAACGGAGGCCACACATCGCTGAAGACGCTCGTG
TTCCACGAGTTCTAAGGCCCATCACCGGTATGGTACCGTCCTACAGGTGC
CATTGAGCCGAAAATTTCGGTCGCTCAAGATTTGGTTCATCATGCGCGCT
TTTGGCTTGACCAAGATCAGGAACCACATTCGCCATGGCATACAGCTGGC
AGAGGAGTTGAAAGAGCTAGTGATGCAGGATGATAGGTGAACTGGATATA
TATATATATGTACTACGGTTCGTTTTCTCCGTGGAACGGCCATCGTATAG
TATATTTTGTGCTTTACTGAGTGGGCGGTATAGCGCAAAACTCTGATGGG
TTTTCATTCCATAAATCGAAATTTAGCGAGCAAGCACCGATGACGCAGAA
ATCTGGACGCTATTCGACTCTCGAGGCCTGAAGTTGTTGGTGATTGGACT
TATCACGGCGCAAAAGCTGTCGAGAAGCGGTCCTACTACAGGTCGGTGTC
TCACCCATCGATTTTTCTTCTTAACTATTGGAGGTGTATTATTGACTTCA
TTAAGTAAAACGAAGCCCGTTACTCCAAACATGCGTTGAGGGACCCGCCC
ACGACTGCTTTAACCCCCCGTTCCACACCTTCCTTACTGGGCATGGAATG
ATGACCCGCTAGGTTTGAGATTGCGGCCCCTCCGCGCTTCGGGCTGATAT
GCTTTAGGCTGAAGGGATCGAACGCTGCCACCGAGGAACTCAGGCGAGTG
ACGCTCCCTGTAGCCGAATAG
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Coding sequence (CDS) from alignment at H-elongata_contig100241:250..2220-

>mRNA_H-elongata_contig100241.31.1 ID=mRNA_H-elongata_contig100241.31.1|Name=mRNA_H-elongata_contig100241.31.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=984bp|location=Sequence derived from alignment at H-elongata_contig100241:250..2220- (Himanthalia elongata Himel1 dioecious)
CTCCAATGCAAGTATGCTGGATCGGCCGCTGTGTGCCCGGAGAACCGGTG
GATCTTGGACGGTGTTGAGCACGCCGATAGTTTCACATTCAACTTGCACA
AGTGCTCCAATGCAAGTATGCTGGATCGGCCGCTGTGTGCCCGGAGAACC
GGTGGATCTTGGACGGTGTTGAGCACGCCGATAGTTTCACATTCAACTTG
CACAAGTGGCTATTGGCGACCTTTGACTGTAACGCCATGTGGGTAAAGCG
GAGCGCCTTTCTGGTCGACGCGCTCTCGATCACCCCGGAGTACTTGAAAT
CCAAAGAGTACGAGCAAGGGCAGGTGTCTGACTTTAGGAACTGGCAGGCT
ATTGGCGACCTTTGACTGTAACGCCATGTGGGTAAAGCGGAGCGCCTTTC
TGGTCGACGCGCTCTCGATCACCCCGGAGTACTTGAAATCCAAAGAGTAC
GAGCAAGGGCAGGTGTCTGACTTTAGGAACTGGCAGGTGCCATTGAGCCG
AAAATTTCGGTCGCTCAAGATTTGGTTCATCATGCGCGCTTTTGGCTTGA
CCAAGATCAGGAACCACATTCGCCATGGCATACAGCTGGCAGAGGAGTTG
AAAGAGCTAGTGATGCAGGATGATAGGTGCCATTGAGCCGAAAATTTCGG
TCGCTCAAGATTTGGTTCATCATGCGCGCTTTTGGCTTGACCAAGATCAG
GAACCACATTCGCCATGGCATACAGCTGGCAGAGGAGTTGAAAGAGCTAG
TGATGCAGGATGATAGGTTTGAGATTGCGGCCCCTCCGCGCTTCGGGCTG
ATATGCTTTAGGCTGAAGGGATCGAACGCTGCCACCGAGGAACTCAGGCG
AGTGACGCTCCCTGTAGCCGAATAGGTTTGAGATTGCGGCCCCTCCGCGC
TTCGGGCTGATATGCTTTAGGCTGAAGGGATCGAACGCTGCCACCGAGGA
ACTCAGGCGAGTGACGCTCCCTGTAGCCGAATAG
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