mRNA_H-akashiwo_Contig105.8.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: A0A6V1PDI6_HETAK (Histidine kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PDI6_HETAK) HSP 1 Score: 208 bits (529), Expect = 6.700e-60 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 3 Query: 3 ERHLPGASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPLTMVGLKKALHTHLIKASSKKK 329 ERHLPGASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPLTMVGLKKALHTHLIKASSKKK Sbjct: 695 ERHLPGASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPLTMVGLKKALHTHLIKASSKKK 803
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: A0A3M0YPL5_9BACT (Response regulator (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M0YPL5_9BACT) HSP 1 Score: 89.7 bits (221), Expect = 1.690e-18 Identity = 47/104 (45.19%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 18 GASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPLTMVGLKKALHTHLIKASSKKK 329 G + D A++G++AL++A + Y ++ MDLQMP MDG +A +A+R S+GP+A+ IVA++A+A T + LDAGM+DFL KP + L++ L+T+ IKA K Sbjct: 43 GITHDLAHNGKEALQLASQQPYDLIFMDLQMPFMDGIEATRALRTSDGPNARTPIVALTASALTSRKNEALDAGMNDFLPKPFSPNQLRQMLNTYAIKAGQSMK 146
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: UPI001F0BE5A7 (ATP-binding protein n=1 Tax=Rhodovarius crocodyli TaxID=1979269 RepID=UPI001F0BE5A7) HSP 1 Score: 87.4 bits (215), Expect = 3.150e-17 Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 18 GASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPL 266 G VD A DG ALE AG AY ++LMD+QMP MDG +A + IR +GPSA+ARI+ ++A A E CLDAGMD++L KP+ Sbjct: 275 GCEVDVADDGVAALEAAGHTAYGIILMDVQMPRMDGLEATRMIRAGDGPSARARIIGLTAAAGPEYEKQCLDAGMDEYLTKPI 357
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: A0A437MIL3_9PROT (Histidine kinase n=1 Tax=Rhodovarius crocodyli TaxID=1979269 RepID=A0A437MIL3_9PROT) HSP 1 Score: 87.4 bits (215), Expect = 6.710e-17 Identity = 45/83 (54.22%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 18 GASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPL 266 G VD A DG ALE AG AY ++LMD+QMP MDG +A + IR +GPSA+ARI+ ++A A E CLDAGMD++L KP+ Sbjct: 732 GCEVDVADDGVAALEAAGHTAYGIILMDVQMPRMDGLEATRMIRAGDGPSARARIIGLTAAAGPEYEKQCLDAGMDEYLTKPI 814
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: UPI001F190BCD (response regulator n=1 Tax=Rhodovarius lipocyclicus TaxID=268410 RepID=UPI001F190BCD) HSP 1 Score: 80.5 bits (197), Expect = 1.080e-16 Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 3 Query: 18 GASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPL 266 G V+ A +G +A++ A A+A++LMD+QMP MDG +A + IR S GP+A+ARI+ ++A A E CL+AGMD++L KP+ Sbjct: 6 GCEVEVANNGLEAVDAAAREAFAVILMDVQMPQMDGLEATRQIRASGGPNARARIIGLTAAAGPEYERQCLEAGMDEYLTKPI 88
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: A0A495WDK2_9RHOO (Histidine kinase n=2 Tax=Azonexus fungiphilus TaxID=146940 RepID=A0A495WDK2_9RHOO) HSP 1 Score: 85.9 bits (211), Expect = 2.320e-16 Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 3 Query: 18 GASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPLTMVGLKKALHTHL 305 G VDQA DG +A+ +AGA Y ++LMD+QMP +DG QA +AIR G +A IVA++A A E RA+CL AGMDDFL KP+ L + LH L Sbjct: 772 GLCVDQAVDGVEAVALAGATTYDLILMDMQMPRLDGLQATRAIRALPGGAA-VPIVAMTANAFAEDRALCLAAGMDDFLAKPVLPERLAETLHRRL 866
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: A0A084XWF6_9PROT (Signal transduction histidine-protein kinase BarA n=1 Tax=Candidatus Accumulibacter sp. SK-01 TaxID=1457154 RepID=A0A084XWF6_9PROT) HSP 1 Score: 80.5 bits (197), Expect = 2.490e-16 Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 18 GASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPLTMVGLKKAL 293 G V A DGR+A+E+ GA + +VLMD QMP MDGY+A +AIR P + IVA++A A + R CL AGMDD+L KP+ + L + L Sbjct: 22 GCEVGIAVDGREAVEICGAGDFDLVLMDCQMPEMDGYEATRAIRAREHPGKRVPIVALTANAMSGDRERCLAAGMDDYLAKPIQIEALAEVL 113
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: A0A848VMF3_9BACT (Response regulator n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A848VMF3_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 5.780e-16 Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 3 Query: 18 GASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPLTMVGLK 284 G D A DG +A+E A Y +LMD+QMPG+DG +A + IR GP+ + RIVA++ATA TE + CL AGMD ++ KP+ M LK Sbjct: 156 GIQADLAKDGGEAIEAAAGNEYDCILMDVQMPGIDGLEATRRIRQDRGPTRRPRIVAMTATATTEDKQECLAAGMDGYISKPVRMEELK 244
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: UPI001FE7BA2B (PAS domain S-box protein n=1 Tax=Marichromatium bheemlicum TaxID=365339 RepID=UPI001FE7BA2B) HSP 1 Score: 84.7 bits (208), Expect = 5.940e-16 Identity = 49/92 (53.26%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 18 GASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPLTMVGLKKAL 293 G VD A DG QAL AR+YA+VLMD+ MPGMDG +A +AIR A+ IVA++A A +E R CLDAGMDD+L KP+ L AL Sbjct: 739 GYRVDTATDGHQALAALRARSYALVLMDVSMPGMDGLEATRAIRALPNERARVPIVAMTAGAFSEDRERCLDAGMDDYLSKPVVRAELFAAL 830
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Match: UPI00165A0976 (response regulator n=1 Tax=Roseomonas ludipueritiae TaxID=198093 RepID=UPI00165A0976) HSP 1 Score: 80.5 bits (197), Expect = 7.750e-16 Identity = 44/92 (47.83%), Postives = 59/92 (64.13%), Query Frame = 3 Query: 18 GASVDQAYDGRQALEMAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEARAMCLDAGMDDFLMKPLTMVGLKKAL 293 G V+ A +G +AL A A AY ++LMDLQMP MDG QA +AIR + GP+ RI+ ++A TE C +AGMDD+L KP+ L +AL Sbjct: 85 GCRVEVASNGAEALARARAEAYDIILMDLQMPVMDGLQATRAIRAAAGPNRATRIIGLTAAVGTEFEQQCREAGMDDYLSKPVQRAVLLRAL 176 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig105.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig105.8.1 >prot_H-akashiwo_Contig105.8.1 ID=prot_H-akashiwo_Contig105.8.1|Name=mRNA_H-akashiwo_Contig105.8.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=90bp MAGARAYAMVLMDLQMPGMDGYQAAKAIRLSNGPSAKARIVAVSATAETEback to top mRNA from alignment at H-akashiwo_Contig105:674848..676735+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig105.8.1 ID=mRNA_H-akashiwo_Contig105.8.1|Name=mRNA_H-akashiwo_Contig105.8.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1888bp|location=Sequence derived from alignment at H-akashiwo_Contig105:674848..676735+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig105:674848..676735+ >mRNA_H-akashiwo_Contig105.8.1 ID=mRNA_H-akashiwo_Contig105.8.1|Name=mRNA_H-akashiwo_Contig105.8.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=270bp|location=Sequence derived from alignment at H-akashiwo_Contig105:674848..676735+ (Heterosigma akashiwo CCMP452)back to top |