|
Homology
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: A0A7S3XV86_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV86_HETAK) HSP 1 Score: 308 bits (789), Expect = 3.690e-101 Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 2
Query: 539 SARRSARWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLVL 1030
S ++ WELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLVL
Sbjct: 110 SEKKREEWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLVL 273
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: A0A835YUT7_9STRA (VIT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT7_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.600e-54 Identity = 98/162 (60.49%), Postives = 123/162 (75.93%), Query Frame = 2
Query: 545 RRSARWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLVL 1030
+R WEL+NH+EGEI EM+ I+ +RGM Q DA+ VVN MAKY+ FFVN+MM+EEL LQVP E +DET+KEG +MFLSFA FGALPLLGY IFP + + + LF A A T LF+MGA+KS F T+SWYASG E + LGG CA VA+E+G LV+GL++
Sbjct: 118 KRREEWELKNHREGEIAEMVAIFTQRGMSQEDASDVVNKMAKYDDFFVNLMMSEELQLQVP-ESQDETIKEGFIMFLSFATFGALPLLGYTIFPMLDPDISNAILFKLACAVTGVSLFLMGAIKSKFATRSWYASGFEMVCLGGVCAAVAFEIGNLVDGLLV 278
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: A0A7S1VE63_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VE63_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.260e-53 Identity = 94/163 (57.67%), Postives = 122/163 (74.85%), Query Frame = 2
Query: 539 SARRSARWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDE-DETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGL 1024
S RR WE+ N+ EGEIKEM+DIYV RGM Q DA V+ TMAKYE FFV+VMM +EL LQVPD+D E+++EG++MF SFA FGALPL+GYVIFP + ++ LFW+A T VLF++G+VKS F + +W+ SG+ETL LGGACA +AY +G ++GL
Sbjct: 113 SERRREAWEMENYPEGEIKEMVDIYVSRGMEQQDAELVIKTMAKYEDFFVDVMMTQELELQVPDDDHVKESMREGVIMFCSFAFFGALPLIGYVIFPILFPTMDDDALFWSACIVTAVVLFMLGSVKSMFCSMNWFVSGSETLLLGGACATLAYTIGQFLDGL 275
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: D8LRS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS5_ECTSI) HSP 1 Score: 183 bits (465), Expect = 3.780e-52 Identity = 92/161 (57.14%), Postives = 118/161 (73.29%), Query Frame = 2
Query: 545 RRSARWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 1027
+R WEL+NH+EGEI EM++I+ ERGM + DA V+ MAKY+ FFVN+MM EELGLQVP D+D+T+KEG VMFLSFA FGA+PLLGYVI P + + + LF+ A T LF MGA+KS FGT+ W SG E L LGG+CA +A+E+G V+GL+
Sbjct: 126 KRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLI 286
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: A0A7S0AV53_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AV53_9STRA) HSP 1 Score: 181 bits (459), Expect = 3.800e-52 Identity = 97/164 (59.15%), Postives = 116/164 (70.73%), Query Frame = 2
Query: 539 SARRSARWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDED-ETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 1027
S R+ WE+ N+ EGEI+EM+DIYVERGM +ADA QV+ M+KY+ FFV+VMMAEEL LQVPDED + E +KEG VMF SFA FGA+PLLGY IFP+ E LF A T VLF+MG VKS F T WY G ETL LGGACA VA+ +G V+ L+
Sbjct: 53 SERKREAWEMENYPEGEIEEMVDIYVERGMVRADAVQVIQIMSKYKDFFVDVMMAEELQLQVPDEDHEMEAMKEGFVMFCSFAIFGAMPLLGYAIFPTAFPHWGEQDLFAAACVITGVVLFLMGCVKSLFSTSRWYLCGLETLLLGGACATVAFTLGQFVDSLL 216
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: A0A6V1NR54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NR54_HETAK) HSP 1 Score: 178 bits (451), Expect = 4.570e-50 Identity = 91/165 (55.15%), Postives = 119/165 (72.12%), Query Frame = 2
Query: 539 SARRSARWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDE--DEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 1027
S RR WELRNH+EGE++EM++IYV RGM + DA V+N +AKY+ FFVNVMMAEELG+ + D +T++EGL+MF +FA FG++PLLGY + P++ + S LF AV TL LF +GAVKS+F TKSWY SG ETL LGG CA +AYE+G V ++
Sbjct: 127 SERRREEWELRNHREGEVREMVEIYVNRGMARDDAEVVLNRIAKYDEFFVNVMMAEELGMPANGQVADPADTVQEGLIMFAAFAVFGSMPLLGYCVVPALAPDASSSELFAVAVFVTLLFLFGLGAVKSHFSTKSWYCSGIETLLLGGCCAGIAYEIGNCVQSML 291
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: W7TLX2_9STRA (Vacuolar iron family transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLX2_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.630e-49 Identity = 96/156 (61.54%), Postives = 112/156 (71.79%), Query Frame = 2
Query: 560 WELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 1027
WEL+N +EGEIKEMIDIYVERGM DA VV M+KY+ FFVNVMM EELGLQVPD ++D +KEG+VMFLSFA FGA+PLLGY + P S LF A T LF+MGAVKS F T+ W SG E L LGG CA++AYE+G LV+ LV
Sbjct: 138 WELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPDPNDD-IVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLV 292
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: B8BVF1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVF1_THAPS) HSP 1 Score: 174 bits (440), Expect = 1.370e-48 Identity = 94/164 (57.32%), Postives = 113/164 (68.90%), Query Frame = 2
Query: 539 SARRSARWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDED-ETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 1027
S RR WE+ N+ EGEI EMIDIY ERGM DA V+ TMAKY+ FFV+VMMAEEL LQVPDED E++KEG+VMF +FA FG+LPLLGY++ P++ E LF A T VLF MG VKS F +W+ G ETL LGGACA VAY +G V+ L+
Sbjct: 113 SERRRENWEMENYPEGEIAEMIDIYQERGMTHDDAKLVIETMAKYKEFFVDVMMAEELALQVPDEDHKIESMKEGVVMFGAFATFGSLPLLGYIVIPALFPSLGEDVLFTAACIVTGMVLFGMGCVKSIFSAANWFTCGLETLLLGGACATVAYTIGQFVDKLI 276
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: A0A7S4MYN1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYN1_9STRA) HSP 1 Score: 173 bits (439), Expect = 2.760e-48 Identity = 93/164 (56.71%), Postives = 112/164 (68.29%), Query Frame = 2
Query: 539 SARRSARWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDED-EDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 1027
S R WE+ N+ EGEI+EM+DIYV RGM + DA V+ TM+KY+ FFV+VMMAEEL LQVP++D + E KEG+VMF SFA FGA PLLGY I P+ E LF A T VLF MG VKS FG+ W+ G ETL LGGACA +AY +G V+GLV
Sbjct: 125 SERERENWEMENYPEGEIREMVDIYVSRGMERDDAEMVIKTMSKYQDFFVDVMMAEELQLQVPEDDYQMENFKEGVVMFCSFATFGAFPLLGYAIIPAAFPYLGEDALFTCACIVTGIVLFCMGCVKSNFGSHHWFWCGMETLLLGGACAAIAYTIGQFVDGLV 288
BLAST of mRNA_H-akashiwo_Contig1040.3.1 vs. uniprot
Match: A0A7S2H009_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H009_9STRA) HSP 1 Score: 171 bits (433), Expect = 4.640e-47 Identity = 92/164 (56.10%), Postives = 116/164 (70.73%), Query Frame = 2
Query: 539 SARRSARWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDED-ETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 1027
S R+ WE+ N+ EGEI+EM++IY RGM + DA V++TM+KY+ FFV+VMMAEEL LQVP++D E+ KEG+VMF SFA FG+ PLLGYVIFP+ LF+ A A T VLF MG VKS F T +W+ G ETL LGGACA VA+ +G V+GLV
Sbjct: 155 SERKREAWEMENYPEGEIREMVEIYESRGMSKDDAQIVIDTMSKYKDFFVDVMMAEELQLQVPEDDHVWESFKEGVVMFCSFATFGSFPLLGYVIFPTFFPDMGSDGLFYGACAVTGVVLFGMGCVKSIFSTANWFLCGMETLLLGGACATVAFTIGQFVDGLV 318
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 1 |
Seed ortholog | 2880.D8LRS5 |
Preferred name | CCC1 |
PFAMs | VIT1 |
Model size | 1052 |
Max annot lvl | 2759|Eukaryota |
KEGG ko | ko:K10610 |
KEGG Pathway | ko03420,ko04120,ko05161,ko05203,map03420,map04120,map05161,map05203 |
KEGG Module | M00385,M00386 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000041,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005381,GO:0005384,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006828,GO:0006873,GO:0006874,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0012505,GO:0015075,GO:0015093,GO:0015318,GO:0015684,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030026,GO:0031090,GO:0031224,GO:0034220,GO:0034755,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0051716,GO:0055065,GO:0055071,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070838,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071421,GO:0072503,GO:0072507,GO:0072509,GO:0072511,GO:0097577,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805,GO:0098852,GO:1903874 |
Exons | 9 |
Evalue | 1.17e-33 |
EggNOG OGs | COG1814@1|root,KOG4473@2759|Eukaryota |
Ec32 ortholog description | Ccc1 family |
Ec32 ortholog | Ec-17_002280.1 |
Description | cellular manganese ion homeostasis |
Cds size | 837 |
COG category | A |
BRITE | ko00000,ko00001,ko00002,ko03400,ko04121 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681387060.9262807-CDS-H-akashiwo_Contig1040:8033..8167 | 1681387060.9262807-CDS-H-akashiwo_Contig1040:8033..8167 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1040 8034..8167 - |
1681387060.9384139-CDS-H-akashiwo_Contig1040:10013..10119 | 1681387060.9384139-CDS-H-akashiwo_Contig1040:10013..10119 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1040 10014..10119 - |
1681387060.9478352-CDS-H-akashiwo_Contig1040:10955..11044 | 1681387060.9478352-CDS-H-akashiwo_Contig1040:10955..11044 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1040 10956..11044 - |
1681387060.9573934-CDS-H-akashiwo_Contig1040:12437..12509 | 1681387060.9573934-CDS-H-akashiwo_Contig1040:12437..12509 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1040 12438..12509 - |
1681387060.9691792-CDS-H-akashiwo_Contig1040:16785..16873 | 1681387060.9691792-CDS-H-akashiwo_Contig1040:16785..16873 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1040 16786..16873 - |
1681387060.9816124-CDS-H-akashiwo_Contig1040:17282..17432 | 1681387060.9816124-CDS-H-akashiwo_Contig1040:17282..17432 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1040 17283..17432 - |
1681387060.9964302-CDS-H-akashiwo_Contig1040:17688..17815 | 1681387060.9964302-CDS-H-akashiwo_Contig1040:17688..17815 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1040 17689..17815 - |
1681387061.0057414-CDS-H-akashiwo_Contig1040:18099..18170 | 1681387061.0057414-CDS-H-akashiwo_Contig1040:18099..18170 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1040 18100..18170 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681387061.0172403-UTR-H-akashiwo_Contig1040:18170..18192 | 1681387061.0172403-UTR-H-akashiwo_Contig1040:18170..18192 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig1040 18171..18192 - |
1681387061.0257413-UTR-H-akashiwo_Contig1040:18391..18582 | 1681387061.0257413-UTR-H-akashiwo_Contig1040:18391..18582 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig1040 18392..18582 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1040.3.1 >prot_H-akashiwo_Contig1040.3.1 ID=prot_H-akashiwo_Contig1040.3.1|Name=mRNA_H-akashiwo_Contig1040.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=279bp
MEMQNLRTDNARAAYYNLDPEASRIIHDSTSAAGQHRENHKGGGEYVKAM IFGGLDGILTSFAIVAGAVGGGLAWQSVLILGFSNILADALSMGVGEYLS SKAHNEYVLSEKKREVGAAEPQGGRDQGDDRHLRGAGYGAGRRDAGGEHH GQVRGFLRERDDGRGARPAGAGRGRGRDAEGGAGDVPVLCLLRRAAPARL RDLPLGAGRGQREHAVLDGGRHHADRALRHGGRQELLRHEELVRLRGGDA GAGRGLRAGGLRGRRPRERPRAVSGPAAA back to topmRNA from alignment at H-akashiwo_Contig1040:8034..18582- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig1040.3.1 ID=mRNA_H-akashiwo_Contig1040.3.1|Name=mRNA_H-akashiwo_Contig1040.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=10549bp|location=Sequence derived from alignment at H-akashiwo_Contig1040:8034..18582- (Heterosigma akashiwo CCMP452) CCACCACAACGTCCACAACCAAAACTACAACGTCCAGCAACAGCACCATT
GAACAGGAAAAGGGACAAGCTAAGCAACCTCCTTCTGCCTCAACCATTGG
GCACCCTTGCGTATTTTATCGGCCCTGGTTGAAGAGCTTTTGGTTGGCTA
CAATAACACAACTGTAGCGAATTTACTCCATCAGAGAACAGGTTATTGCA
ATGGCCAGCCCTTCCGGTGGCGCTGTGCACTGGCTGCCACCGAATACTAT
GTGAACATACAGGATTGGACTTTATGTTGATAAAGTATCGAATGAATCGA
GCATAATTAAGGTGCCGTAGCTTGTTACACCTCCTGAAAAAGGTACCTGT
TTTTGTTCCATGAATTGACATTCACATTTACCTGTCTCAGTTCAAGAGGG
CACATCCACAAAATGGAGATGCAGAATCTAAGAACCGATAATGCCAGGGC
AGCATACTATAACCTGGATCCGGAAGCCTCCAGGTGACTATGCAATTTGA
CTTCCCCCCACCACCCAGTTTGTCCACTACCAAAATAGTGATTTGATTTG
TTTTTTTGGCAGGCGTCCTTCGCTCCAACCTCTTCCATCATTATACTCAT
CAACGGAGCGCTTAAAATGTAGTTGTTAGAGTCTTATCTGCCCTTGTTCT
TTAAACTTTTAAATTAGATGGCACTTTTTCACATGTTGAAGCTGCTAACT
TGAGTGAGCGCCACAACTTGATGAATCTCTCCTTTACGATTGACATTTGT
CAACCAACTTTCTGCAGGATAATTCATGACAGTACCTCAGCTGCGGGCCA
GCATCGAGAGAATCACAAAGGGGGCGGGGAGTATGTCAAGGCGATGATTT
TTGGTGGACTGGATGGGATTCTAACCAGCTTTGCGATTGTTGCGGTAAGA
AGGAGGCAAGGGGAAGGGAAACCAGTGTGTTTGGCCGGGCTTGCCTGTGC
CTATGGCATATTTTGTGCAAGAAGGCAACTTACTTTCAAGCCGTTTTGAT
GGAGTAGTAGCAAGCAAGCAATCCACACTGAAGGCCCTGATTTATCACCC
CCATCTCGTCTACGCGGTGGGGCGGTGGCGGCGACGGCCGCGGCGACCGC
TGCGGCGACGGCCGCAACGACGATTTCCGTCTCCTCACGGACCGCCGCAG
GGCGCCGTGGGCGGCGGCCTGGCCTGGCAGAGCGTGCTCATCCTGGGCTT
CAGCAACATCCTGGCGGACGCGCTCTCCATGGGCGTGGGCGAGTACCTGA
GCTCCAAGGCGCACAACGAGTACGTGCTCAGCGAGAAGAAGCGCGAGGTG
GCCTGAGCCCGGGCGGGCGGGCAGGGCCGGCCCCCTCCCCCCCCTTGAGG
CCCCGGCTGCCAACCCCACTCTTGGAGCGAGTATATAGCCCGGGGCGTCT
TCCTTGGCCTCCGCCGCTGGGATTCGAACCGGGGTCTCCCTCACCCGCCG
CTGCTGCGTTTCGGACACGGAGCGACCAGTCACCCTTTGCCACATCGGCG
GTGACCGGGAACCCCGAACCTTCAGTGTCCCCTTACCCCTTGCGCAGCGT
CTCTCAGCTTCGACCAGCGCCCGTTGGTTGCCGATACTGGACGTGTTTTC
AAAGCGGAACCTGTTGCCAGGAATGGCTGTTTGTTGTTCACCAGCGGGCC
GTCGCGCTGTGCCTCAAGCCCAGCCCCCCCTTTTTTCCCCCGACCTGCCT
GCCGCCCAGGGAGCTGCGGAACCACAAGGAGGGCGAGATCAAGGAGATGA
TCGACATTTACGTGGAGCGGGGTATGGGGCAGGCCGACGCGACGCAGGTG
TATATGTGTGTTTTCTTCATCAGACTAACAAAGAAGTGCATGGGGGCCAG
TACTCGAGTATAGTATGACGGCATTGCATCTCATCAAAAATTTCCCGATT
CTGACCCCCCCCTCCACCCCCATGTCATCAAATTCTTCCCTTGAGTCCCA
CTTCCTCTCTTTTCTTTGAAGTCATCGTGTTGTATGACCCCAATTGCGTA
AAATTTCGATTTCTACACCACAAGTAACAGCATTAACCTATATAGTACCA
GGTGGCGAATGCGCCAAGTATGGCGAACGATATGGCGCACGGTTTCATTA
AATCCGCAAAAATCAGGGAAATATTTTTTCATGTACTGTTGATGTTCCAT
GTCATGCCCAACACCATAGGAGTCTGGGAAAAAATTCCCTCCCGTGCTAC
TTGCTCTAGATTCTTCAAAATTTTAGTTTGAAGTGAGTAAAAAAAGAAGA
AAAAACAAAAATAGGGTCATCTGATCCCCCTATTTTCACAAAACCATTGC
TCCAAATCCATAAACTGTTTCAAAAGTGGTTTTTTGTTCAATAATCAGAA
AGACCCATAAAATTGATACCAAAACCTTGATTTGTGGTTTCAAAACTGCA
ATATTTTTTAATTTTGGACTTTTGGTACCACAATAGGATTCAGAGGGAAA
TTCAACAACTTATTTATCTAAAGCTTGAATAAAAACAAGGATACAAAAAG
GTTTCAGCGTGCCAAACAATGTGAAAATGCCGAGAAACATGAAAAGTTGG
TCTGGAACCATTTTTCTGGGGCTGTATCTTTCTCCTTCTTCCTCTCCATC
CTGCTTGAAGAGTCACCTATGACGTTCGCCACTGCTGGCGCACTCAGTAG
TTTGGTGACTTCAACTTGAACCTGCCAGCTGGCTTTTTGCACAGTAAAAA
CTATTCTAAACACCCAAACTTGAAGTTATTTGATGTATCTTGACCAAATA
AATATCTTAAAAGTTTTTTTTTTACTGGAGCCGGCTTGAAGGAGGAGGAG
AATGAGGGGGGGGGGGGAACATCAGGCCGGAGAATTTGAAAATTTTGAAA
CTCCTCAGGCCCTCCTGCTTTTTCTCTGGGAAGAAGCCAGTGTAATTGTA
TTCTAATCTTTCTGGAACAAGTATTTTGATGAACAACCGCACAATTTGAG
TTTTTGATTTGAAATTTGCGGGCAAAGTCCAATGCTTGTCTTCTCTTTCT
GGGTGGGTAGTAAGCTTCAACATGGTGCATTCGAGATCGAAATCCCAGGG
TGCCTAGCTGTTTTCGAACCAAAATATGCTTGAAACACATACCATTGAAG
GAAAACAAGTTTCAGAACGGCTTGAAACCTCGAGAGATGATTTGAGAATG
TTTCGCGTATGGATTTGGGGTACCTTTGATCAATTTTTAAGGGTGGGAGC
CTTGCATCAACCTCAAACCAAACAGATGAAGATCCTTGCTTCACTGGCCG
ATAAATCTCTTCGTTAAAGACTATGCTAGTCATTCAAGCAATGAAAATGC
TCTTCTCGATGAGACGAAGATTTTACCTGACGCAAGGAGTAAGATTTAAA
AATGTTTAGCTGGCCATATGGGTGTGTGTTTAAGCAAGCAACAATGGTTC
GCCACCAGTTGGAACTTAGGTCTCTTCTTACATGGATAGGCTTCCATTCA
CACAAAAGATCAAGGTACTGTTCTTTCTACTGATGAAACAGTTCAGCAAA
GTCATTTAGATGCAGAAGCAACATGGTTTGACAATCTTCTCCCTTCCCCT
TTCCCCCTATTCCATCACTATGTGAACAGTTTATTGCTGAAAATCTAGCT
TGAAAAATATGGCAATGAGCTCAGAGGCTTGGAAAGAGAGGCCTAGGAGG
CCTTCCATGTGTTTCCATTCAACTTTCATCTATTTTTATTCATTCCTAAA
CCAAAAACAGGCTGCCAAATACATTTTTGGTGGACCTCTAGCCCCTAATA
TGTTACCAGAGCGCCACCGGTGGCGCTTCTAAACCACCCCTGGGGGCGTA
CCACTTGGATGGCTCCATCTTCAGCACCCCTTCACTACAGTCAACAACAT
TTGTCCTGGGCTAAAGGCATATAAAAACCTAACTAATGCACATGTTCTGT
AAAGCTGAGGTTAATTTACCTATCATGGGGTACTGGCCATGCTTGTTGGT
GATTTATGCTGGAATTGGTGGGGAGTTCGCCAAAAAAAAAACGAACACCA
AGGAGGTGTTGGCCAAAAGAAACATCCTTATAGAGAACTAACTGCATGTA
TGAGGTTGTTTCTATGGCATGACCTTCATTTGTGTACTATATTAGGGTGG
TAGGGTAACTTGGTGTGGCGTTTGGGGGCCAGATCGCCACAGGTGGCGCG
ATTTGGCCATTTTCAGGATAAATTCATTAAAAATAACAGAACTAAAGTGA
CGCCTTTTCCTTTTGGGGACCTTAAGTTTACTCCATGTGGCACCTCTCAA
CAAAATCAGGGGGTCTGGAAATGATTCTAACATTTATTTTCAGAGCTTGG
AATGTTAGCGTATTTTTTTTGGTAAATTGGTGTATATTTGACCTTCGTGG
GAAGTGTTTGAGGGTGAGTTTGATGGCCAGTTTATATTTTTTAGTGAAGT
TTGGGCTGCATTGAACAAGTTATTAAGAGGTCATGAACCATGGCAACCTC
CTTCATCACATGGTATTCATGTAAAAAAAAAGGCCAAAATGCGCCATACG
TGGCGCTCTACGCTGGTACTATACAGGTTAACAACAGCACCTCTGACTGA
TTTCCGCCCAGAATTGTTTGCTGAGTCTTTAAAAATGGTCCTGTTTGTTA
TCGCACTCTGATGATGGTGGCGTAAAAAATTATTAAGTTTCAACCAACCA
TCAAAATATTGGAATCACACTGTAGGTTTCACTAAGCCGTTTTCAATGCG
ATGCAGCAGCACGTGAGTCTTACTGTGCTGTTTGTTCCTCCAATGGGCGG
TACGTAGAGCAGCAGGCTGGATTGGTTGTCAGGTGCGTCCTTTGACGCCA
GTGAATGTGTATGTTGGGGGTCTGGGGGTGGAACCCCCAGCAGGGGGAGT
CTGAGGGGGAGGATCCCCCTCAAAGGAGAGTTAGCGGGGTGGAGCCCCCC
GATTTTTTTTTTGAGTTTTTAGGAGTCATATAGAGGCCGATTGTACTGAA
AAAATGCTGGCATGAATGATAGTCAGCAACGTGGCTAAATTCCTGTAAGT
TGTAGTTACCGAACAGGCCTTTCATAAATAAAACCAATTTGTTGGCTGCC
TGATACTGAACAGAACGCAGTGTACACAGGGTACTATAAAAGAAATTTAG
TATTTCCACGACCTACCTCAAGTTGAATGAATATACCTCAGAAATTTGTA
TTTTCCAAGGTACTAGAAGGAGTATGTAGAAGCAGATTTATTCATTCGCA
TATACAGAAACTGAAAGTTTCTGGGAAGGTATAGGTCGTGCCGTTTGGGA
GCACAAAAGATTTTGCTGCGGCAGGAAGAACTTAAGCTTGCTGACATATT
TGTATTTACCTAGCGCCCAAAGGGCTATAGTGTACGCCTGCACACGAGAC
GCGACGTGGCGCGCCGCACGCATGGAACAACATGCGCGCCGCTCCGTGGG
TGACTGGCAAGGGCGAACGGGGTTCTTGTGGAGCCAACGGCCATAACCCA
GGAGGAGTGACAGACTGACGAAGAAGCTTTGGATCTCGCACCCGGACGAG
GAGGACCCAGGCGCAATTCGCGCGCTTCCATATAATAGCGGCGATGAAGC
TGAATGTCTGGGATGGGAGGGAGGAGAGCTATATTCCGTCAATCTTGAAC
AAGAAGAGAAAGAGTAGGGCGAAGGACTTGGGACTTGCTGAAGGCGGCGG
GGAAGAGGAGGGTGTGAATCTCGTGATATTGTTTATGTTTTTCTTTTTCT
CTTCTTTTCCCCTTCTATTTGCGCTCCTGGCAGCGGGATGGAGGGGAGGA
AGGAGGCGGGAGGGTGGTGTAAAAAATGTGACTTTTTTTGTGTCTCGATT
ATTGGTGTTGTGCTTGCTGAGCCGCCTTCATTATGTACCTTGATGGGACC
TGGCTGGAGTTCTGCCAACTTGGTGAAGAAGGCATGTCTTCATGTCGAAA
CCTCGGGGGCCGGAGAGGCGTCTCGGTTGCTGAAAGATCAAGTGATCGTC
CCGCACCGTCAGCAAGCACCTCCCTTTGAACGCACGCCGCGCTCCCTTTC
ATGCCAACGCCGCCTGTCCCAAATAACCATACGCCGCCGCCGGGGACGGG
GGGCGGGGGGCGGGGGGCGCCAGGTGGTGAACACCATGGCCAAGTACGAG
GCTTTCTTCGTGAACGTGATGATGGCCGAGGAGCTCGGCCTGCAGGTACT
AGTACCGCCGGTCGGTTGGCGTTGGTTCTTCTTTCCCTTACTGTATTTTA
TTTTGTTCTTATATTACATAGTTATTATATATATAATTACATCCAACACT
GATTAACTGTGGCGTGTACGTCTCAGCAGGGTGCATCATCTAGACAAAGG
ACGATCAACCTCGTTTCTAACTTGCTTCACACTCTCTCTTGGTTTGTTCT
TTCCCTCTCACTGTTCGTTTGGCTTTTATTTCGTCTTTTTAATGTATATA
CAGAATGTATCGATCTGGGCGTCGAGCTGGGTGTTTCCGCAGATGTTGTT
TTGTCCTGTGATGTGTGTTTTCTCTGTCCACGCCGACTTACACGCCCCTG
CTCCTGTACGACGCGGCTTGCACACAAACAAACACTTCTGAATCGCTCGC
ACCCTCACGGACGACCGTGATGCCAAGAACGAGGTCGGGGAACTTGGTCG
GGCAAGTCACGGAGGCCAAGAGCATCCTCCTAACAAAAAAGACGGCATTG
CCTGTGGGGTTTTGGCAGCCTACACCTTCACAGGAGGAAGAGGGGAGGGC
AGTTCGGTCGCTTCCCAGATGTACTACACTCACTATCCGGGGGGAACGGG
GGAGGACTTGTTTGTCTGATTGTTATACTGATCTACCACATGGGCCATGC
CCAACCTATAGTAGTTCCATCAAAGAGGCAGGCGAGCACTCATTTCTTTT
TGTGAGAGTACAATCAAAGAGGGGTTGGCAAAACTCAGCCACACTCCAAC
ATATATAAATGGCTTGACTCCTCTGTTTGATGAGCGCAGTCATTGACAGT
GACCAAACCCAAGCCAACTCCAGCGACGGCGATGGCCAACGACGGGAGAC
TCGCATATATATACATTTAATATTCAACAATCACCGAAAATACTGAGATT
TTCGATGGCAATTAGCAAAGCATACCGCTTTTTGGTCCTTTTGTCGAAAA
TACCGTTTTTTTTTGGTGCCATTTTTCGAAAATACCGTTCCCCCTGCATT
TTAACCGATTTTTGATGTGCATATACAGAACCAACCGCACCATGAAGAGT
ATGGTGGTAATACTACGTACACACACACACACAAAATGATATCAGCATTA
GTACTGGGGGGAAAAAGTGGCCGCCAGCCACCGCTGCCGCCCCAGCCGGC
GGCAGGTCGTCAGCGCACAGAAACTTTCACCTCAATCAGAAAATGCCCCA
TTAACGACACGCTGCTTCTCAAGACATGGCACACATTCCAAAAGACAAAC
CCAAGAAGACAGCCAGCAAAACGAGCCTTAAGGAAAAGCCGAAGCAGCGG
CGGCCTTTCCGTACTGCTCTGCTTCTTCCCTTCATGCACCAAAACACTTT
GGGGCGAAAATAAAAGGCAAAAACAAACCCAACAACAGGTGCCGGACGAG
GACGAGGACGAGACGCTGAAGGAGGGGCTGGTGATGTTCCTGTCCTTTGC
CTGCTTCGGCGCGCTGCCCCTGCTCGGGTGAGTGAGGCCCCCCCGGGGGG
TCGGGCGCCCGCCTCCCGACCGATGATGAAGAACTTTGAACTTTCACCCC
GGCTGAAACTCATGGCGGGGGTGGTGTGTGTGGCGTGGATGGGGGGGTGA
GGGGGAGGCCTTGTACAGCTCGTGGCGGGGGTGTGTGTGTGGCGTGGATG
GGGAGGTAAGATGAAGAACTTTGAACTTTCAACCAGGCTGAAACTCATGG
CAGGTGTGTGTGTGTGTGGTGTGGATTGGGGGGAGAGGGGGTTCTTTGGC
AAGGAGGGGCAGGGAATGGGGAGGAAGGGGCGGGGGAGGGGGCTCCGCAA
GGGTAAGGCGGCGCCAGGGCGGGGGCTGCATGGCTGCGAGGAGAGGGTCT
GCTTTGATGTGATGGGCGGCTGCTTGGGCAAGGAATTGGAGTGCTTGTGG
CAAGTAGGGATTGGGCACTGCTCGGCTCGGGCTATAAAATAGGGGGCTGC
TTGGACGGCCGGCCATGCTGGGGTGGTGGTAGGGCATTTGAACAGAATTT
GTGGTACCCTATGTTTTTGACTGGGTTGGTTTACTCCCCCCCCCCCCCCC
CCCGAAAAAAAAAAACATCCTGAGGTGTGAAATGCCATGTATTCTATGTT
AGCCTCCTACACGGGAGCATGAACCGGGCTGAAGAAACCACTGCCGGCTC
TGACTTCAACCCAAGTTTTTGTTCGCATGCATTGCCATGATACACCCACC
ACCTGGGGCCACGACCGGCGGTGCGCGCGGGGGCCCCGCCGCCGCCCTTC
GCTCCCCTCCATCCCGCCGCGCTCGCGTGGGACCCAACCGGTGCCCCCCC
CCGCCGCCGGCAGCTACGTGATCTTCCCCTCGGTGCTGGGCGTGGACAAC
GAGAGCACGCTGTTCTGGACGGCGGTCGCCACCACGCTGACCGTGCTCTT
CGTCATGGGGGCCGTCAAGGTGCCCCCCCTTTCACCCTTCTTATACCCCG
GCGCCGGGGCCGCCCGCAGCCTCCTCCGCGCCCGCTCGCGGGCAGGCTGC
CCCGGCGCTTGCTCTGGGACCCCTCAAACTTCCACTGCCGGCTTCTCGGT
CCCTTGGGCCAGGCGGGCGCAGGCGGTGGGGCGGTCGGCGGCGGTGGAAA
ATTACTATATCCCGCCCCCCTCTTGGCCCATCTAATGCGTGGTGTTCCCT
TCACTCACAGACCCCGAGCCCCCTGCCGACATGGCAGATGTCCGTTACAA
TGTGAGATATAGATACATGTGTGAACCTATACCAGCTCCCTTTGCATCCT
TACAGCGATGCTTTGACTGCTTGAGCCTGCATTTGGCAAGAAGAAATTTA
AAGATGACTGGAATAGAGTGAAGATATTGAAAACCAGTCTCGTACTAACC
TTTCAGTCCTAGGCTTGGTTAAAAAATGGCATGGGACTAGTAACCGTTTC
AATCGCTTTTATTCCATCAAAACGTCAGTGAAATCATTATTCTTCGTATT
TGGAGAATAAACATGTTTGGTGAGGAATGACTGGTGGTGGAACTTTCGCA
TAACGGACTTTGGAACATTATTTCCTCTCACTCTTCTCAGGCGAAAGCGT
ACTGCTTCACGGCGCTGCTTCTGTTACGCTGCTTCCTCTTCTTGTAATCA
ACTCTTCCCCCATATAGATGGGAAATGTATGGGTAAATCGAAACTTCGCT
AATAAATGGTGAAAATTTCATCCAACTACCACACCCAATCCGTATCCTTT
TCGGTGACACTAGGATTGGAAACAGTCTATTCTGTATATGGTAAAATGTA
TTGGTGAATTCATAGAAAATGTGAAATATATTGGTGAATTTTTAGAAATT
GTAGCCCTACCAGCCAATCAGCTGTGTGAATTTATAGGACTTTTCTGTTG
CGAACTTTTCCATTGCCAAAGGTCGCTTTGAAAAATCCTATAAATTCACA
CAGCTGATTGGCTGGAAGAGCTAAAAATTCACACAGATTTCTATCAATCC
ACACAGATTTCTATGAATTCACCAACACATTTCATGCATTTTCACAATAC
GAACAGGATAACGATTCAAGCAAACCTTCGATGATTTGGATTCGCCAAAG
GTGTAAAAAACATCAATACGATTTGTCCCCGAAAAAGACGCATTTAAGTG
AAATGGTTACTAAACGGGTACTAGTCCCATGCCATTTTTTACCCCTTTTT
ACGGATTCCTGAGAATGACGGTAACAGTCAGACGATCCGTTAACGATCCC
TTGCACTGGCCGTGTGGGACGGGGAAGCCGTTCATATTGCATGACAGTAT
TTTGACAGACAACACAAAAGACATTGTGCGTGTATTTGATGGTCTGCTTG
CCTGGGCAGTGGTGCTCGGTGAAAAATATTCACTATAACTATAATACTAA
TGAATAGTAATCAAATATGAATTATCGGCGCGCCAGCTGGTCTTTTCTTT
TCTTTCTTTTCTTTCTTTCTTTCTTTCTTCTTCTTTTTTAGTCTTGTTCA
TGCAATGCTCTCCTCTCACCCCCTGAGCCACGATCACTGTCTGCTTGCAC
GCGCCATGCCATCTGAACCCTTCGTTGAACGAAGCTTCAAAGTTGCCCGA
GGAACGCCAGAAAGCGCCCGGCACGCTTTTTTTTGCCCCATCGCCTCGCC
CCATCTTTCATTTGGCTCGTCCGCTTGGTGCTTCCTCCGACAACCTGCAT
CCTTGAGGAGCGATCTCACGACCAGCCTGCAGTTCGAGATGGCACACATA
CCATGATGATGACAATGGTTGATCATTTTTTCTGAGATATTTTTTTTTTT
TGGGGGCGGGGGCAGAGCTACTTCGGCACGAAGAGCTGGTACGCCTCCGG
GGCGGAGACGCTGGCGCTGGGCGGGGCCTGCGCGCTGGTGGCCTACGAGG
TCGGCGGCCTCGTGAACGGCCTCGTGCTGTGAGCGGCCCGGCGGCCGCC back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig1040:8034..18582- >mRNA_H-akashiwo_Contig1040.3.1 ID=mRNA_H-akashiwo_Contig1040.3.1|Name=mRNA_H-akashiwo_Contig1040.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=837bp|location=Sequence derived from alignment at H-akashiwo_Contig1040:8034..18582- (Heterosigma akashiwo CCMP452) ATGGAGATGCAGAATCTAAGAACCGATAATGCCAGGGCAGCATACTATAA CCTGGATCCGGAAGCCTCCAGGATAATTCATGACAGTACCTCAGCTGCGG GCCAGCATCGAGAGAATCACAAAGGGGGCGGGGAGTATGTCAAGGCGATG ATTTTTGGTGGACTGGATGGGATTCTAACCAGCTTTGCGATTGTTGCGGG CGCCGTGGGCGGCGGCCTGGCCTGGCAGAGCGTGCTCATCCTGGGCTTCA GCAACATCCTGGCGGACGCGCTCTCCATGGGCGTGGGCGAGTACCTGAGC TCCAAGGCGCACAACGAGTACGTGCTCAGCGAGAAGAAGCGCGAGGTGGG AGCTGCGGAACCACAAGGAGGGCGAGATCAAGGAGATGATCGACATTTAC GTGGAGCGGGGTATGGGGCAGGCCGACGCGACGCAGGTGGTGAACACCAT GGCCAAGTACGAGGCTTTCTTCGTGAACGTGATGATGGCCGAGGAGCTCG GCCTGCAGGTGCCGGACGAGGACGAGGACGAGACGCTGAAGGAGGGGCTG GTGATGTTCCTGTCCTTTGCCTGCTTCGGCGCGCTGCCCCTGCTCGGCTA CGTGATCTTCCCCTCGGTGCTGGGCGTGGACAACGAGAGCACGCTGTTCT GGACGGCGGTCGCCACCACGCTGACCGTGCTCTTCGTCATGGGGGCCGTC AAGAGCTACTTCGGCACGAAGAGCTGGTACGCCTCCGGGGCGGAGACGCT GGCGCTGGGCGGGGCCTGCGCGCTGGTGGCCTACGAGGTCGGCGGCCTCG TGAACGGCCTCGTGCTGTGAGCGGCCCGGCGGCCGCC back to top
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