mRNA_H-akashiwo_Contig1034.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1034.4.1
Unique NamemRNA_H-akashiwo_Contig1034.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
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BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: A0A7S3USU2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USU2_HETAK)

HSP 1 Score: 130 bits (328), Expect = 7.680e-38
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 1 
Query:    1 MIYQVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISIERGVPTE 192
            M  +VYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISIERGVPTE
Sbjct:   30 MTKKVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISIERGVPTE 93
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BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: A0A8H5BYL8_9AGAR (CRAL-TRIO domain-containing protein n=2 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5BYL8_9AGAR)

HSP 1 Score: 70.5 bits (171), Expect = 7.390e-13
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 1 
Query:    7 YQVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISIERG 180
            Y+V  ++S A+ +G D YPE MGK +IINAP  F  +W V++GW+DP TV KI I  G
Sbjct:  192 YRVKDYVSAASSIGQDRYPETMGKFYIINAPWAFTAIWSVVKGWLDPVTVQKIQILGG 249
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BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: A0A4Q2DJM4_9AGAR (CRAL-TRIO domain-containing protein n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DJM4_9AGAR)

HSP 1 Score: 70.5 bits (171), Expect = 7.950e-13
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1 
Query:    7 YQVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISIERG 180
            Y+V  ++S A+ +G D YPE MGK +IINAP  F  VW V++GW+DP TV+KI I  G
Sbjct:  194 YRVKDYVSAASGVGQDRYPETMGKFYIINAPWAFTAVWSVIKGWLDPVTVAKIQILGG 251
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BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: A0A0V0QBH9_PSEPJ (CRAL-TRIO domain n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QBH9_PSEPJ)

HSP 1 Score: 69.7 bits (169), Expect = 2.020e-12
Identity = 26/56 (46.43%), Postives = 42/56 (75.00%), Query Frame = 1 
Query:   13 VYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISIERG 180
            VY FI  A+K+  D YPE++G+ FI+NAP+ F G+W++++ W+D +T +KI+I  G
Sbjct:  186 VYNFIQLASKVAQDNYPEILGRMFIVNAPMLFTGIWQIIKPWLDEKTRNKITIMGG 241
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BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: A0A369J0W7_HYPMA (Sec14 cytosolic factor n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369J0W7_HYPMA)

HSP 1 Score: 68.9 bits (167), Expect = 2.700e-12
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:    7 YQVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISI 171
            YQV  ++S A+ +  D YPE MGK +IINAP  F  VW V++ W+DP TV+KISI
Sbjct:  190 YQVKDYVSQASSISQDRYPETMGKFYIINAPWAFSAVWAVIKPWLDPVTVAKISI 244
[Close]
BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: A0A8H5MBA7_9AGAR (CRAL-TRIO domain-containing protein n=1 Tax=Tricholomella constricta TaxID=117010 RepID=A0A8H5MBA7_9AGAR)

HSP 1 Score: 68.6 bits (166), Expect = 3.790e-12
Identity = 30/55 (54.55%), Postives = 39/55 (70.91%), Query Frame = 1 
Query:    7 YQVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISI 171
            YQV  ++S A+ +  D YPE MGK +IINAP  F  VW V++ W+DP TV+KISI
Sbjct:  195 YQVKDYVSQASSISQDRYPETMGKFYIINAPWAFSAVWSVVKPWLDPVTVAKISI 249
[Close]
BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: I7M251_TETTS (CRAL/TRIO, amine-terminal domain protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7M251_TETTS)

HSP 1 Score: 68.2 bits (165), Expect = 6.660e-12
Identity = 27/54 (50.00%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:   10 QVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISI 171
            QVY FI  A+K+  + YPE++G+ FI+NAP+ F GVW V++ W+D +T +KI+I
Sbjct:  174 QVYNFIQLASKVAQENYPEILGRMFIVNAPMLFSGVWAVIKPWIDEKTRNKITI 227
[Close]
BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: A0DVT4_PARTE (CRAL-TRIO domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DVT4_PARTE)

HSP 1 Score: 67.4 bits (163), Expect = 7.810e-12
Identity = 25/54 (46.30%), Postives = 41/54 (75.93%), Query Frame = 1 
Query:   10 QVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISI 171
            QVY FI  A+ +G + YPE++GK +I+NAP+ F G+W +++ W+D +T +KI+I
Sbjct:  176 QVYNFIQLASNVGQNNYPEILGKMYIVNAPMMFTGIWAMIKIWLDEKTKNKITI 229
[Close]
BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: A0A0L6WG09_9AGAR (Sec14 cytosolic factor n=1 Tax=Termitomyces sp. J132 TaxID=1306850 RepID=A0A0L6WG09_9AGAR)

HSP 1 Score: 67.4 bits (163), Expect = 8.350e-12
Identity = 28/55 (50.91%), Postives = 40/55 (72.73%), Query Frame = 1 
Query:    7 YQVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISI 171
            Y V  ++S A+++ SD YPE MGK +IINAP  F  VW +++ W+DP TV+KI+I
Sbjct:  180 YHVKDYVSRASRISSDRYPETMGKFYIINAPWAFSAVWSIVKPWLDPVTVAKINI 234
[Close]
BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Match: A0A420Y3P0_9PEZI (S14 cytosolic factor n=1 Tax=Coniochaeta pulveracea TaxID=177199 RepID=A0A420Y3P0_9PEZI)

HSP 1 Score: 67.8 bits (164), Expect = 8.670e-12
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 1 
Query:   10 QVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPRTVSKISI 171
            QVY ++S A+ L  + YPE +G+ +IINAP  F GVW +++GW+DP TV KI I
Sbjct:  195 QVYSYVSAASNLSQNYYPERLGRLYIINAPWGFSGVWSMIKGWLDPVTVQKIHI 248
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1034.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3USU2_HETAK7.680e-3895.31Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A8H5BYL8_9AGAR7.390e-1351.72CRAL-TRIO domain-containing protein n=2 Tax=Tulose... [more]
A0A4Q2DJM4_9AGAR7.950e-1353.45CRAL-TRIO domain-containing protein n=1 Tax=Candol... [more]
A0A0V0QBH9_PSEPJ2.020e-1246.43CRAL-TRIO domain n=1 Tax=Pseudocohnilembus persali... [more]
A0A369J0W7_HYPMA2.700e-1254.55Sec14 cytosolic factor n=1 Tax=Hypsizygus marmoreu... [more]
A0A8H5MBA7_9AGAR3.790e-1254.55CRAL-TRIO domain-containing protein n=1 Tax=Tricho... [more]
I7M251_TETTS6.660e-1250.00CRAL/TRIO, amine-terminal domain protein n=1 Tax=T... [more]
A0DVT4_PARTE7.810e-1246.30CRAL-TRIO domain-containing protein n=1 Tax=Parame... [more]
A0A0L6WG09_9AGAR8.350e-1250.91Sec14 cytosolic factor n=1 Tax=Termitomyces sp. J1... [more]
A0A420Y3P0_9PEZI8.670e-1251.85S14 cytosolic factor n=1 Tax=Coniochaeta pulverace... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1034contigH-akashiwo_Contig1034:149074..150948 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog148960.XP_006959414.1
Preferred nameSEC14
PFAMsCRAL_TRIO,CRAL_TRIO_N
Model size193
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000226,GO:0003006,GO:0003674,GO:0005215,GO:0005319,GO:0005488,GO:0005543,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005628,GO:0005634,GO:0005737,GO:0005794,GO:0005829,GO:0006629,GO:0006644,GO:0006650,GO:0006656,GO:0006657,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006892,GO:0006893,GO:0006896,GO:0006900,GO:0006996,GO:0007010,GO:0007017,GO:0007034,GO:0007049,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008525,GO:0008526,GO:0008610,GO:0008654,GO:0009058,GO:0009653,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010563,GO:0010876,GO:0010927,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015914,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0019216,GO:0019220,GO:0019222,GO:0019637,GO:0019953,GO:0022402,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030427,GO:0030435,GO:0030437,GO:0031090,GO:0031210,GO:0031321,GO:0031322,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031984,GO:0032153,GO:0032502,GO:0032505,GO:0032989,GO:0033036,GO:0034293,GO:0034613,GO:0035091,GO:0035838,GO:0042763,GO:0042764,GO:0042886,GO:0043001,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043934,GO:0043935,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045017,GO:0045184,GO:0045833,GO:0045936,GO:0046470,GO:0046474,GO:0046486,GO:0046488,GO:0046890,GO:0046907,GO:0048193,GO:0048194,GO:0048468,GO:0048519,GO:0048523,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050997,GO:0051055,GO:0051171,GO:0051172,GO:0051174,GO:0051179,GO:0051234,GO:0051286,GO:0051321,GO:0051641,GO:0051649,GO:0051704,GO:0060187,GO:0061024,GO:0061951,GO:0065007,GO:0070405,GO:0070727,GO:0071071,GO:0071072,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072657,GO:0072659,GO:0080090,GO:0090150,GO:0090407,GO:0097164,GO:0098588,GO:0098791,GO:0098876,GO:0120009,GO:0120010,GO:1901351,GO:1901352,GO:1901564,GO:1901566,GO:1901576,GO:1903046,GO:1903725,GO:1903726,GO:1990778,GO:2001245,GO:2001246
Exons2
Evalue1.7e-13
EggNOG OGsKOG1471@1|root,KOG1471@2759|Eukaryota,38H26@33154|Opisthokonta,3NW62@4751|Fungi,3UYKH@5204|Basidiomycota
DescriptionSEC14 cytosolic factor
Cds size192
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387058.3064246-CDS-H-akashiwo_Contig1034:149073..1491931681387058.3064246-CDS-H-akashiwo_Contig1034:149073..149193Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1034 149074..149193 -
1681387058.3179188-CDS-H-akashiwo_Contig1034:150876..1509481681387058.3179188-CDS-H-akashiwo_Contig1034:150876..150948Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1034 150877..150948 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1034.4.1prot_H-akashiwo_Contig1034.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1034 149074..150948 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1034.4.1

>prot_H-akashiwo_Contig1034.4.1 ID=prot_H-akashiwo_Contig1034.4.1|Name=mRNA_H-akashiwo_Contig1034.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=64bp
MIYQVYQFISHATKLGSDCYPELMGKAFIINAPLFFVGVWRVLQGWMDPR
TVSKISIERGVPTE
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mRNA from alignment at H-akashiwo_Contig1034:149074..150948-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1034.4.1 ID=mRNA_H-akashiwo_Contig1034.4.1|Name=mRNA_H-akashiwo_Contig1034.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1875bp|location=Sequence derived from alignment at H-akashiwo_Contig1034:149074..150948- (Heterosigma akashiwo CCMP452)
ATGATATATCAGGTGTACCAGTTCATCAGCCACGCAACAAAACTAGGGTC
AGACTGCTACCCTGAGCTAATGGTAAGATTGAAGTTTATCTTGTTCCAGG
ACCCATTTTGCTGAGAAATACTTTCCCCCTTTCATCATGCATATAGCTGT
TGCAATTAATCAATCGTCATCAATCTAATTATTACTTGTAAAGGTGTTGG
GTCAATAGTAGTAGTAAAATTATATTTTTACATTGAAATACTTTAGCAAG
CTTAGTATAGCAAGCAAGCCCAGAGGGCTGCCGCAAAGCAGAGCCTGGAC
AAATACTAAAAGATGGATAAATCCAAAGGGTTGAAAGTTTTGAAAGATTA
AATTATGATGGCGCCGAAGGCTGCGCCCCCGTCTGTAAGATAATAGCTAT
ATGTCAACAACTGCTGCTTCTGCTGCTGTCGTTGTTGATGGTGCTAAGCA
GAGCAAATCATTCTTCTGGTGATATTTCTCTAAATGTGTTTGTCATCAGT
TCTTGCAAAAAATGATACGACTCCTTTGGTCATCTCCAAGAGCTCATTGG
TTTCCATTCCAGAAATATATTCCCATTGGTTGTAAACAACACAGTACATA
ATTTAATTGTGGCGAGTCAGATAGTTTCTCGCCAGTATACTGATAACCAA
AGATACAAAAACGGAAATAAGCTTCGGAGATACATCATACCCATATCGAA
AAGCGAGATCTCATATCCTAGCACGAGTATACACGGAAACTGCACGGAAT
GCTCGAATTCCAAAGAGACCGCAATGCACAGACATCAGTCCCATAGAGAG
TGGTCTCTGAATCTTTTATGATGAAAAAAACTGTAATAAGGTTCCATTTT
TGTTCATGAGCTCTTGTACAGCCATTTCCAGCTGCCCCTGCCCTCTGCCT
CTCCTGATATAATACTGTGCATATACGGTAGTAAGTGTTATAACATATAC
ACGTGTTTCTACACTCTTAGCCTATGCCATAAGGTCAGGCAAGCACCAGT
GTAATAATGGGCTTTTATTACATGGCTGAGTTTCTTGAGGAAGTGAGAGG
CTTCCAAGAGAACACAGCATATTAGTTGAAAAGTGTGATTGTGTTGCTGT
CAACGCCACTACGCAGAAAGTACAAAAGTGTCTTCTCTTGTTGTGTCAGT
GCACACTTCTACTTCTTCTCCATTCATCATAATACAAGCACTTTCATACC
TCGAAGTGTGAGTATTCAACAGTAAGTATGGATGAACATATTTTAAAATT
AATTGTAATAATAATAATAATTGTTGAGCACACAATCTCCGGAGGAAGAG
CACGGGCGCGGTGATCACAAGTTGCCGCAGGCGTACGGGCAGCCGAGCCC
GGGTGCCGCGCAGTTACTTTGTTGTTATTGTTATATGAACCTACGAGGTC
ACGATATCCTTCTCGTATTTGCCAGAACAGCATGAAGTGGAAGGACAAGA
AGAAGAAATGATTGTTGCAGAAAGTGGCGCTGCTGAATTCATCATCATCG
TGTATTGTGTTGTGAGGTGTTGATGCTGCTTGTAGAAAGTGCTGCTGTGA
TACTGGAACTCAGTTCCAGTAACAGCGACGGTATTGTGTGGCCTATATGG
TCTAACCTTAAAATGGGTTCCCCCCCGCACAATTTCCAAGTCTGTAATTA
CAGTTCCCATTAGGAGGTTTCCTCCTGCTGCAATAATAATAATAATAACA
TACAAAGCATCAATTCTCATGGAGCTGCCCCTCCCACCACCGCGGCCGCC
GCCAGGGGAAGGCCTTCATCATCAACGCGCCGCTGTTCTTCGTGGGCGTG
TGGCGCGTGCTCCAGGGGTGGATGGACCCCCGCACGGTCTCCAAGATCTC
CATCGAGCGGGGGGTGCCCACCGAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1034:149074..150948-

>mRNA_H-akashiwo_Contig1034.4.1 ID=mRNA_H-akashiwo_Contig1034.4.1|Name=mRNA_H-akashiwo_Contig1034.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=192bp|location=Sequence derived from alignment at H-akashiwo_Contig1034:149074..150948- (Heterosigma akashiwo CCMP452)
ATGATATATCAGGTGTACCAGTTCATCAGCCACGCAACAAAACTAGGGTC
AGACTGCTACCCTGAGCTAATGGGGAAGGCCTTCATCATCAACGCGCCGC
TGTTCTTCGTGGGCGTGTGGCGCGTGCTCCAGGGGTGGATGGACCCCCGC
ACGGTCTCCAAGATCTCCATCGAGCGGGGGGTGCCCACCGAG
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