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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 442 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 255 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681387058.0452728-UTR-H-akashiwo_Contig1034:138747..138901 | 1681387058.0452728-UTR-H-akashiwo_Contig1034:138747..138901 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig1034 138748..138901 - |
| 1681387058.0932686-UTR-H-akashiwo_Contig1034:147057..147090 | 1681387058.0932686-UTR-H-akashiwo_Contig1034:147057..147090 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig1034 147058..147090 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681387058.0555012-CDS-H-akashiwo_Contig1034:138901..139081 | 1681387058.0555012-CDS-H-akashiwo_Contig1034:138901..139081 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1034 138902..139081 - |
| 1681387058.0662656-CDS-H-akashiwo_Contig1034:146982..147057 | 1681387058.0662656-CDS-H-akashiwo_Contig1034:146982..147057 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig1034 146983..147057 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1034.3.1 >prot_H-akashiwo_Contig1034.3.1 ID=prot_H-akashiwo_Contig1034.3.1|Name=mRNA_H-akashiwo_Contig1034.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=85bp
MRVSTNHGGIAATVTFVPAAGGKAKVISSSFSEVSLEAPIYRHEEIWTQP
GIYTIKWKNTSKLHTKAIVFTVFEPGSENTQISL* back to topmRNA from alignment at H-akashiwo_Contig1034:138748..147090- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig1034.3.1 ID=mRNA_H-akashiwo_Contig1034.3.1|Name=mRNA_H-akashiwo_Contig1034.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=8343bp|location=Sequence derived from alignment at H-akashiwo_Contig1034:138748..147090- (Heterosigma akashiwo CCMP452)
GTGGAGGTCAAGGCCGGCGCAGGCCCGCGGGGGATGCGGGTGTCCACCAA
CCACGGGGGGATCGCCGCGACCGTGACTTTCGTCCCTGCCGCGGGGGGCA
AAGCCAAGGTTGCCGCCCCCACCCCCCCCTTCAACTTTTTTTAATACACA
TAAGATATATTTAAATGAATTGAAATGAACAGCTTACTGATGTTTCGTTC
TGCACACATTCTCTTGTAGCTTTGGGTGAAGGTGAAAGGGATTAAAATTG
ATATTTCTGGCTCCTACTCGTATTTTGTCTTCTGCACTTTAAGTCTAAAA
AACCACTGCCATTGCTAAAGAATGCTGCGCGAGACTTTTCGGGTAAATCT
CATCATTGAGATTGGCTGGCTTCTAGCCATACTCGGTATCTAACCGCACA
AAACAGATGGTTTACGTAGAACAACATTCTGTGAGCCTCCCTCATTGTTC
GTTTGGCTTACGTGGTTTGTTCATAGGTCTTGTTCTCTTTGCTCTTCCTT
TACTTTTATTTTCCGAGTATAGTGCTTTCCCAGCGACGCTCGTCATGTTC
GCTCCCCGTATCATTTTTACTTTGATCATCAGAAGAATATGTAGCCAATA
GAATTTACGCATTTGTCAAATATTTGCTTCAAAAACAGATGTTGCTGTCG
GTGACAGCTGACACGAACAGTATCAGGGATGATACTGTTTATTTTTACTT
TTGGGGGGTTACAAGACAAAAAAGGGGAAAGTATAGGTCAGAAGGGGGTG
ATACCCCCCTTTTGACCTATACCTTTCCTTTTTTTTATCCTGTAACCCAC
AACTTCGAAGAAAACGGTATTGAATTCTATAGAACTATTGACAATCTCTA
TTGTTCCCCACCCAAGTACTGTTCGTTCGCTGCTCCTACTCCTATGTCGA
AGTTCAACACGGTATCCAGAGATACGATATATATAGGTAGATGCCAGTGG
CTCTGATGGAATTCTGCATCGAAAAAGCACTGGAAGGACGCCATACCCTC
CCGTTGTCCCAGCCAGTTTTTAGGGTCGGCTGGTGCGGGCGTTCCGTTAC
GGGCACACGACCCCGGCCAGATGTTGATGAGCTCCGCCCAGATGCTCACC
GTTTGATGGCATCATCTAAACGTTATTTCATTGTGTGTTCTTCTTTAAGA
AACATAGCTGCTGCTGCTGGTGGGGGGGGGGGGGTCAAATTTGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGAAGAAATGAGATATTTCTTTGAGCAGA
TGTCAAGGCGACCTACAAATAGACGGTGGTTGTGTGGCTCAGGATGTGAA
GGGGCGCATTGTAAGTAGAACGTAGGAAAAAGAAAGAAGAAAAAAAAACA
GTTTCATGCCAAAAAATATTTTCTTTGATGTGGTTAGACCCGCATACATA
CATAGAGAATTACACATCTGTTGCCCTTAACGCAGCCCTTCATTCGAAGC
GCTCCAAAAGGAATTTTTGAATATATATGGTTTGGCTATTGTAGAACGAG
AACAGCTGGAACTTCAGATTCTGCTGCTCGAGTTTCTGTATGGGCTGCTG
CTGCTGCTGCTGCATGAGCTGATCACACACCCTCTGCTGCTGCTCCGGTG
GTGCGGCCTCCCCTCCGGACTGCGCCTCCGTCTTCTCGTCGTGGTCGGCA
GGCTCGGCCATCACCAGATCTGAAGGCGGCGGCGCCTGGGGGCGCTGGTG
CCCAGGCCTCGCACTCCGGCTGTTCCTGGTCGATGTGCTCCAGCTCCCGC
ATCCCTTTCTAGTCGTGGCCGACAGTCGCGTGCTCTGTGTTTCCGATCAT
TAGTGCCCGCCTGTTTACCACCATACTTATGGTTGCCTAACACGGTTGCT
TGCTCAGAAAGTGGTGGCATCCCTTGACGTTTCTTGGGTGATTTGGACCG
GCATTCTTCTTCTTCATGACTGGTGCAGTCTGCTGTGGGGTTTTCTGTCT
GCTGTTATAGTTATACCTCTCAGAAGGCAAGACTTCTTCAAGTGCTGGTC
AGACCTGCATCGCCAGGAAAAATAAATATTCTCGGTATACTTCCTCTGGC
TGCATAGTCAGCCTGCTTGTGATGCAGCTGCTCAAGCTTGATGTTGCCCC
AGTCCAATTATCCCGATAGCCCACTCCCATTTTCTTCCCCCCTCCTCCTC
TGACGAGAGGATGTTTAACAACGCCCTTTACACCAGTTTCAAGGCATTCC
GTAACAGGGTTGCCCTCCATGAAACACCGCCCTCTTCCCTTCAATAAGGT
CATCAGATCTAAATTATTGATTTCAAGTCCCACCCTTGAAACCAACGAAC
CAATCTCTGCTGCTATATTTTGTTTTGAAAACTGCCGCAGCAGAGGGAGC
CAGATAGGACTCAAATCTCTGTACTTCCTCTGAGTATTGAGTGGTGTATT
GGGAGTGTTGTATATGTGCATGATGATGATGATGATGATTTTAGTTTATT
TCAAGTCCACCAATTGGATAACTACAAGGACCGAAGCCCCGGCCTCCATA
TGTGGACCGTTCCATCACTAGTTCCCACTTCTCATTCCTTGGTCCATCAC
CAAAACTGCAGAAAAGAAAAAGAAAAGAAAGAAAACATACCACTCTGTTC
CCAACTGCACACCTTTACAGTAGCAAATTCTCTCCTCATCCCATTTCCTG
CCCTACTTTCCACCCGCAAGTTGTACAATCAAACTCCTCATCCGGTCCCT
CCTTCCAATGCTTGTTGAACCTTTGCTGTTCCTGTATCCATTTGACCTTT
TGCTGTCCCTGTGAACCACACCATGGCCATGGGCACTCCTGTCGTTTGGC
CTGCTTTGGGGGGTGCTGCTCAGCGCTTGCCGCCCTCCCCCCAGTTCCAG
CTGCCCCCCCTGTACTCCGCCCATCTCCGGCTGCCCCCCCCTTGCCCCTT
CCAGGGCCCCCTCCCCTCCCTCTCCCACCCCTAGTCACCCTGCCTCCCCT
CCCTCGCATGGCTGCTCCACCCCCCCTCTGGACCCCAGGTGTCCGTGGAC
TTGCATTGGCCACCCTGGCCTGCGCTTCCTGGCGCTCTTTCTCAGCCCTG
GCCCTGGTGCGGTGCTGGCGCTTGAGGTCCTCAGCGTATTTCTGGTGCTG
AATCAGTCGGTCCCTTTTATCCTCTTCCTTCGCCTGTGCTTCTCCTTCTG
CTCGTTCCCGTTCCACTTTCCGTTGTTTCTCTTTCTTTGCAAGCCTCTTG
ACCGCTCTCGCTTCAACCAGCGTGTACCCTTCCACATCAGCTGCCTGTTA
TGGCACCCATTCTCCCCTTTTCATTGGGGCCGTATCACACTCCCTTACTG
ACTCATCGTCAGAACTAGAGTCCGAGTCTGAGCAACTTGTAGTGGAGTCG
CCGCCGTCGCTGCTCGACGACTCCGTTTCATCACCACTGAGCGACGCCTC
CGGCGAGGGCATCTCCCTCGTGTCCCATACTCTCAAAGGTAGCCCAAGCA
ATTTGGTGCTGCTTGCTACACACGCGATGTGCAATGCAGCAGCAGGTGAG
TACTCCAAACAGAAAGAAGAAGACTGTTGTGTTAGTCTTGCCTCTTCCTC
TTCTTCCCTCCTCCGCTCCTGCTGCTCCCCGGTGTTGTGCACTTCGCAAA
AAGCCGAATTTTCGTCTACCCCATTGACCAGAACCTGTCTGTCTTGGCCA
ATCGGCGCCCCCCGCCGTTCACCCCGGTTTCCGTTTGCTCCCCCCCCCAC
CAATTGGAAGCCTCTGTGGAGCATAATCTGTGTTTTGGACCAGAATAGTT
TCCCCCTGTAAAACCCTGCTGGTAAGCTCGTCGCCTTCTTTTCCTTCTTC
CTGTTGAGCAGAAATAGCAGCACCAGGTGGTTGTTGTCCTGCTGCTGGTG
GTCTGGCGGAAGAAGAATGCGAAGAAGGTCCTCCTCTGATCATTAAAAAT
AAATGTTTGGCATGCCCTTTCTTGTGGCAAGCCCTGGCTGCCTACGGCTC
TTGCTCGCAGGACAGCACAAGGACCAGGCATCCTTGTCACATTATTTCAT
GTATAGCGGTGAGAACCCCTGCCCACTATACCACCCTGGCAGTGCGATAC
CAGAGTACTACCCATCACATAGGGGAAGTGTTTTTGTTGTTTAATTCATG
GTACATTTTTGGGCTCAGAGTAGAAGAGGAGTATCCACTATCCTTGTTCC
AGCATATAGCTAAGGAATATTCAAAAATAGCCATAGTGGTAGATTTCTAG
ACGTAAAGTAAAGAAGACGATGTACGAGTAGGAGCCACTGTTTGAAGTAT
CAACTTCAATATCTTTCATCTTCACCCAAAGTGTGTGGTCTTTTTCGGAC
CAGGGAAAGAGACTGCGTGATTTTGTTTTTTTTTATTTGTTTCTGATATC
GCGCGCGGGATGTTTTCAATGCCACCAAGTCACGATTCTGTTTTCAGTTT
CTTTATGCATGTAAGCCAATCCAGCTTAAGAGAGACTTCACTTTCTTACT
ATAATAACGAAGTACCAAACGAACAACTGATTTGGAAATTTTCAATGATT
TGTCGGACGAAAATAAGAACCACTGCTGCTCAGAGCAGCAGCATCAAATT
AACAAAAATCATTTTAATCAATAAGAGATTGATAAGGACACTTTTTATAA
TCCAACAGAACTTCATAAGAACTAAATATTTCGATCGAGAGTCCGATCTT
CTTCAGTATTCCCGGCCGCTCTGGATAATTCAGCTGAAACGTATACCAAT
GAAATTCTTCTTACAACATCATCACCACACACCCCACTGCTCGCTAGTTC
TTATGAAGTTCTGTTGGATTATAAAAAGTGTCCTTATCAATCTCTCATTG
ATTATTCTCATGAATCCAATTCTGGCGCCACAAACTCAATAAAAATCATT
TTCTTCGCCGCCCTCGTCATTCTCTACTACTTCAGGAACAATGTACCAAG
CATTGCTCAAGGAAGTACCCCAAGTACCCAGAAGTACCCAATCTGTGGTA
CTTGGGTACTTCTTGGTACTTGGGGTCCCGAGTGATTTTTAAATTTACAA
AAAAAAAAAAAAAAAAAAAATGGGCTCAGCAGGTAAGGGATAGATGGCCA
ATCTGTTTTTCCAGCCTTAAAAGTGACCCAATTTTTTTTATTTGTAGTTT
GAATTTTTTACCTGGGCCCTCCGCTTGCCATTTCTATGGCCTCCAAATTG
TGGACTGGGCACCTCTTCGCATTTTTGCGTTTGGCTGGTTTCAAACTGAC
AGGCAACACGTGCTGCTTCCATCTTGTATAGCTCCCCTTGAATTCGGCCC
CACAGTCCTTACATTCCATCAATAAATTTTTATATTTGTCTCGAGATTTT
ATATTCGCAAATTTACGCCATGGCGCTTCCACCCACGCCGCTTTGCCCTC
TTCCTCTTGCGTTTGGGTACTGCCATCACCCTTTTCTTCATCCTGATTTG
CTTTCTCCATTTTGCGATAAAATAATCGTATCTGTCTATGCAAATGGTTC
TATACTTCGCTTCGTATCTGCTGCTACGCCTTGTTCAGTGGCGCAAGGAT
TCAAGCGGCGTTTCGCTTCTTCCCTAGCCTTCCCTTTTTTCCTCTTTTTC
CCCCTTTTATTTTGCAATTTCATTGATTGAAACGGCTGTGCATGGTTATG
GTACGGGCGGGAGTTATGTCCGCAGGAGCAAAGACCGGCCCGCCCGATGT
GCAGTGGCAGGGATATTTTTTCTCGTACTTGGGTACTTGTCTAATATGTG
ATATATTCTAATTGGGTACTTGTCGTTGTCGTAGTTGAGTACCGCGTACT
CAAGTACGAAAAGTACGATAAAATAATGCGTACTTGCGTACTTCCTCGAG
CTATGGTACCAAGTATACACAGAGAATATGCACTGGAAAAGAAAACATCG
ATCCACATGGATCATTTTCACATCATGATAAGATATACTAATCCATTCAA
TATTTTTTATGCGAAAACTCACGTCTTCACCAGAGACAGACTGAGAGCGA
GAATGAGAAAAGATGGTTCTTCGTTACGTATTGAAAAAGCAAGCATCACG
CAATCATGCACCAGAGCAGTCTGGGTCGTTCATTCCATCAAGGTCGAGAA
CATTCCATAATCAGGCCACGCAGGGTATTCGAAGAAAAAGATTGTTGCGC
TCACCTACTGACAGGCCTATATAGCCCACAGGCTGCCCCCCCGGCCGAGC
CAAGAGTCGTTTTGTGTTCTAAGTCCGGCCGTCAAAAGTAGGCTGTTTTG
ACAGAATTCCCCGCCCCTCGCGTCCCATATTACAGTTGTGAGACAAAGCT
CAGTCATCAACCAGATGGTTTCTGAAGAAAGAAGCATCGTCGTCACTCGG
GCGAATAGTAAGGCAATCTGCCTCCATAAAACAGAAAGAGCAGTGGGGGG
AAATATTTTTTTCGTCACACGTTTGCGCTTTGCAATCACGAACGGCGAAT
GACGGGCCTGATGGTGCAATTTGAGCCCGGAAGAAGAAATGAAGAAGATG
ACGGATGACGTGTGTGGTTGTTCAGTTTCAGAAAAGGAAGAAGAAGAATT
AAAGTACGCTGACAGCCACACGCCTGAGAGACATCAACGGATCCGAGGAT
CCCCAAGGCCAGGGAGATTATCTGTTTTTCTCAGGTTAATGTTGACGATC
CAGATGATGTTGTATTATGTATGAACTTTATGGCATTTTTGTCCTCAGCA
TTATTCCTTTGAAGAAAGTTTAGTTATTTTGAATTTTTTATTTGATCCTG
TTTGTTGATCAAAATGTCATGAGAAAGAGAAAATAAACATATTAGAGATA
TTTCAAAAAAGAGCGGATGTCTGCAATAGTTCATTATTTGGGGAAAACTT
TAACGAGATTTCTAGAAATTTCATTTTCCGAAGTTCTCTCAGAAAATTAA
TAAATTTCAGTTTCATAGAGTCAGCACGTCACGCTCTAAACAGCAGCACA
ACAGCACCAGGGAAAAAACACACCCATAGCTCATATCGGAGCTCAAAGAG
CGTTTTCTACCTTCTCTTCTTTCTCATCGCAGCATTCACATACATCCTTT
TGTCATGATACGATGAGATAGAGCTCATTCAGCTGATCATTTCGTACTAA
AGAAGTATGGGTTGATTTTGCTGGTGCGTTGAGTTATGTCAATGCGAAGG
TTCTGAGGAGCTCGCCACCCCAACTTTGAGCACGGCAAGGCCTTGGTGAA
ACGAAACGCTTGGGGCCAAGAAGAGAGGCACTTCTAGCTTACATCAACCT
GAATAAAGGATCAAAGTTTGGATAACATTGGTAAGGCACAGCAAAAGTTC
TAATATCTGTTCCAGGCAAAATGGTCTACTTTTGACGGCTGGACTTGGTA
TGGAAGACACTATCGTAGCCGATCACCCAACAAACCCAAGAAAATCAAAG
CAGTACATGTTACCCCTGAAAAATGACAAACATTTATATTTTTAATGAAT
TCATGCTCCCAACACACCACGCAATATTCAGAAGAAGGGCAGAGATTTGA
GTCCTAGCTGGCTCCCTCTGCTGCGGCAGTTTCCATGTGTGGTCTTTTTC
GGACCAGGGAAAGAGACTACGTGATTTACAACTTTTAGTTTTCTGATATC
GCGCACGGGATGTTTTTAATGCCACCAAGTCACGATTCTGTTTTCAGTTT
CTTGCTTCTGACTATTTTCTTTCGTGATTGGTGGTTTCTGTCTTGCTTTA
TTTTTATTCATTCTTCTATGTTTTCTCGTGGTTGTTTGTATGTGTTGCTC
ATCCATGCTTTTGTTTTTTCGCCAGGTGGGGTATAGCGGTGTTGCCAGCT
TGACACAAGTCACGTCTTATTTCATTATTCATGAGATCGAATGGGAGTTC
TTCTTCTAAGAAGATATGGTGTACACCATACATTTGTGAACTACTTGGTG
AAGGCGAAAGCCGCAACCTTGTTACCTTCAACAAACAGTGATGAATAATA
CTACCCCTTTGGTTTTGAGTTCGCTGATTTATCATCCACGCGGTTTCTTC
TATTCTCATAATGTTCACACAACTCACTTTTTAACCTGCACTTATTATAT
GTTATTCAGGTAATTTCAAGCTCTTTTTCTGAGGTATCACTAGAAGCTCC
TATATACCGACACGAGGAAATATGGACACAACCTGGGATCTACACAATAA
AATGGAAGAATACATCAAAGCTGCACACAAAAGCAATCGTATTTACTGTA
TTTGAACCTGGCTCTGAAAACACCCAGATTTCATTATAAATTATTCGTGG
TGGTATATAGTCACATTACATTATTCATACATCAAAGCTGCACACAAAAG
CAATTGTATTTATACTGTGTTTGAACCTGGCTCTGAAAACACTCAGATTT
CATTATAAATCATTCGTGGTGGTATAGTCACGTTACATTATTA back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig1034:138748..147090- >mRNA_H-akashiwo_Contig1034.3.1 ID=mRNA_H-akashiwo_Contig1034.3.1|Name=mRNA_H-akashiwo_Contig1034.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=255bp|location=Sequence derived from alignment at H-akashiwo_Contig1034:138748..147090- (Heterosigma akashiwo CCMP452)
ATGCGGGTGTCCACCAACCACGGGGGGATCGCCGCGACCGTGACTTTCGT
CCCTGCCGCGGGGGGCAAAGCCAAGGTAATTTCAAGCTCTTTTTCTGAGG
TATCACTAGAAGCTCCTATATACCGACACGAGGAAATATGGACACAACCT
GGGATCTACACAATAAAATGGAAGAATACATCAAAGCTGCACACAAAAGC
AATCGTATTTACTGTATTTGAACCTGGCTCTGAAAACACCCAGATTTCAT
TATAA back to top
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