mRNA_H-akashiwo_Contig103.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: A0A6V1K7V1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1K7V1_HETAK) HSP 1 Score: 444 bits (1141), Expect = 5.000e-156 Identity = 224/226 (99.12%), Postives = 224/226 (99.12%), Query Frame = 1 Query: 1 RLSVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPNGLQGGANIPPLPAPTYTSEESKL 678 RLSVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTK HFELPNGLQGGANIPPLPAPT TSEESKL Sbjct: 3 RLSVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKAHFELPNGLQGGANIPPLPAPTNTSEESKL 228
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: A0A6U1N7F4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N7F4_9STRA) HSP 1 Score: 238 bits (608), Expect = 4.050e-75 Identity = 125/220 (56.82%), Postives = 155/220 (70.45%), Query Frame = 1 Query: 7 SVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTA----PEPEESGAPKAT----DIP---VFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPNGLQGGANI 633 SVG+L+P ST+FLLCD+QERFR I++ TV NT++YLV+++ EL + V+AT QY +A G PEI L P +E G D P V++KKLFSM TD+V L+ G L SVVLFG ETHVC+QQTCLDLL RGLEVHVVADGCSSQRP DR VALQRMA++GAFVTTAES VF L+ +A HP K +S LTK HF++ N G +++ Sbjct: 4 SVGRLRPQSTIFLLCDIQERFREKIWKFGTVANTAKYLVEVAGELNVKVVATTQYAKALGAIVPEINLPVSTEVPAQDEEGTDTKPXXXXDTPAAVVYDKKLFSMCTDQVNAELEAAGEGLTSVVLFGIETHVCIQQTCLDLLSRGLEVHVVADGCSSQRPYDRGVALQRMARAGAFVTTAESAVFELLGTAQHPKLKAISNLTKAHFQIENDFMGMSSL 223
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: A0A1E7FE23_9STRA (Isochorismatase hydrolase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE23_9STRA) HSP 1 Score: 218 bits (556), Expect = 2.250e-67 Identity = 112/207 (54.11%), Postives = 147/207 (71.01%), Query Frame = 1 Query: 7 SVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPNGLQGGA 627 SVGKL+P +T+FLLCD+Q+RFR L ++ ET++NT++Y+ +++EL IP++ TQQYT+ FG T + T + E + K +FEKK FSM TDEV + + SVV+FG E HVCVQQTCLDLLE G EVH++AD SSQ+P DRE+AL RM+Q+GAF+TTA+S FMLM+SA H NFK VS LT H +LPN G A Sbjct: 19 SVGKLKPENTVFLLCDIQDRFRPLTWRGETIINTAKYMTSVAKELDIPIVITQQYTKVFGETVKD---TFADQEHFASCK-----IFEKKRFSMCTDEVKSHMQTLNRD--SVVIFGIEAHVCVQQTCLDLLEDGKEVHIIADSVSSQQPYDRELALNRMSQAGAFLTTAQSAAFMLMQSAEHANFKAVSKLTVEHMKLPNEFNGDA 215
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: A0A6U3TTI9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TTI9_9STRA) HSP 1 Score: 218 bits (556), Expect = 3.420e-67 Identity = 110/200 (55.00%), Postives = 144/200 (72.00%), Query Frame = 1 Query: 10 VGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPN 609 +GKL P+ST L+CD+QERFR LI+ ETV+ T+R+L +S+EL +P++ TQQYT+ FGPTC P + G+P +PVFEKKLFSM+T E+ ++ +++S ++ G E HVCVQQT LDLLE G +VHVVADG SSQ+P DRE+AL RM +GAF+TTA+S FMLMRSA HPNF+KVS L H +L N Sbjct: 15 LGKLHPSSTALLVCDIQERFRPLIHNGETVIRTARFLTSVSQELDVPILTTQQYTKVFGPTCASC---FANPGDLGSPS---LPVFEKKLFSMLTPEMKNHIND---NIKSFIIVGIEAHVCVQQTVLDLLELGHDVHVVADGVSSQQPFDREIALGRMTSAGAFLTTAQSAAFMLMRSAEHPNFRKVSKLVVDHMKLSN 205
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: A0A7S2I082_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I082_9STRA) HSP 1 Score: 217 bits (552), Expect = 1.000e-65 Identity = 113/202 (55.94%), Postives = 146/202 (72.28%), Query Frame = 1 Query: 10 VGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATD-IPVFEKKLFSMITDEVGTALDQCGPS-LRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPN 609 VGKL P++T L+CD+QERFR LI+ ETV+ T+++L +S+EL +P++ATQQYT+ FGPT + PE+ G TD +PVFEKKLFSM+T +V + + + S +L G E HVCVQQT LDLLE G +VH+VADG SSQ+P DRE+ALQRM +GAF+TTA+S FMLM+SA HPNFKKVS L H +LPN Sbjct: 88 VGKLHPSTTALLVCDIQERFRPLIHNGETVIRTAKFLTSVSKELSVPILATQQYTKVFGPTVTDC---FANPEDIG----TDAVPVFEKKLFSMMTPQVKSHFTETLQNKTTSFILVGIEAHVCVQQTALDLLEMGHDVHIVADGVSSQQPFDREIALQRMTGAGAFLTTAQSAAFMLMQSADHPNFKKVSKLVVEHMKLPN 282
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: A0A7S3P6X5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6X5_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.760e-65 Identity = 112/201 (55.72%), Postives = 140/201 (69.65%), Query Frame = 1 Query: 7 SVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPN 609 +VGKL P+ T LLCDVQERFR LI++ ETVV T +Y+ + L IP++ATQQYT+ FG T E T PE A P+FEKK FSM+TDEV T L + S S ++ G ETHVCVQQTCLDLLE+G +VH++ DG SSQ+ DR+VALQRM +GA++TTA+S +MLM+SA HP FK VS LT H +LPN Sbjct: 16 AVGKLHPSKTAILLCDVQERFRPLIHKMETVVQTCQYMTSVGSALEIPIVATQQYTKVFGNTLDECFAT---PEIKAA-----TPIFEKKKFSMLTDEVSTKLTELDKS--SYIVIGIETHVCVQQTCLDLLEQGKDVHIIVDGVSSQQAIDRQVALQRMQAAGAYLTTAQSAAYMLMQSAEHPKFKDVSKLTVAHMKLPN 206
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: W7U6T6_9STRA (Isochorismatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6T6_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.340e-64 Identity = 107/201 (53.23%), Postives = 143/201 (71.14%), Query Frame = 1 Query: 7 SVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPN 609 ++GKLQP +T FLLCDVQERFR +I+ V+ T++++ + +EL IP +A++QY +AFG T PE+ A + IP FEKK+FSM+TDE+ + QC P ++VVLFG E HVCVQQT LDLLE+G VH++ DG SSQ+ DR VAL+RM ++GAF+TTAESLVFMLM++A+HP FK +S L K H PN Sbjct: 28 AIGKLQPKTTTFLLCDVQERFRDVIWHFPQVIRTAKFMTAVGQELQIPTLASEQYPKAFGATVPELKAAAVD---------YCIPTFEKKMFSMLTDELKAQM-QCEPERKTVVLFGIEAHVCVQQTALDLLEQGYAVHILVDGVSSQKAHDRAVALRRMEKAGAFLTTAESLVFMLMQTASHPQFKTISFLIKEHAGEPN 218
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: B7G0F0_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G0F0_PHATC) HSP 1 Score: 211 bits (537), Expect = 1.460e-64 Identity = 110/203 (54.19%), Postives = 140/203 (68.97%), Query Frame = 1 Query: 1 RLSVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPN 609 RL VGKLQP ST LLCD+QERFR LI+ ETVVNT RY+ + + L +PV+ATQQYT+ FG T P+ P+ ++ IP F+KK FSM+T++V LD+ + ++ G E HVCVQQTCLDLLERG VHV+AD SSQ+ DRE+ALQR+ +G F+TTA+S FML++SA H NFK VS LT H +LPN Sbjct: 11 RLFVGKLQPESTALLLCDMQERFRPLIHNMETVVNTCRYMTSVGKALNVPVLATQQYTKVFGETVPDC-FADPQDLQT-------IPNFDKKKFSMLTEDVDRVLDEWKKD--TYIIMGIEAHVCVQQTCLDLLERGANVHVIADAVSSQQAYDREIALQRLQAAGCFLTTAQSAAFMLLQSADHSNFKAVSKLTVEHMKLPN 203
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: A0A7S1CWC7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CWC7_CYCTE) HSP 1 Score: 212 bits (539), Expect = 2.590e-64 Identity = 107/203 (52.71%), Postives = 146/203 (71.92%), Query Frame = 1 Query: 1 RLSVGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPN 609 R+ VGKL+P +T LLCD+Q+RFR L+Y+ ETVV T++Y+ +++ L IP++ TQQYT+ FG T + T + +++ P+FEKKLFSM+T++ T LD S S +LFG ETHVCVQQT LDLLE G +VH++ DG SSQ+ DRE+ALQR++Q+GA++TTA+S FMLM+SA HPNFK VS LT H + PN Sbjct: 47 RVMVGKLRPETTAMLLCDIQDRFRPLVYRGETVVRTAQYMTGVAQALDIPLVMTQQYTKVFGNTVEDCFATKEQLDQT--------PMFEKKLFSMLTEQCKTHLDTLHRS--SYILFGIETHVCVQQTALDLLEEGKDVHIIVDGVSSQQAYDREIALQRLSQAGAYLTTAQSAAFMLMQSADHPNFKAVSKLTVEHMKKPN 239
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Match: A0A7S0FTH2_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FTH2_9STRA) HSP 1 Score: 212 bits (539), Expect = 2.590e-64 Identity = 112/203 (55.17%), Postives = 144/203 (70.94%), Query Frame = 1 Query: 10 VGKLQPASTLFLLCDVQERFRSLIYQAETVVNTSRYLVQISRELGIPVIATQQYTRAFGPTCPEIPLTAPEPEESGAPKATDIPVFEKKLFSMITDEVGTALDQCGPSLR---SVVLFGQETHVCVQQTCLDLLERGLEVHVVADGCSSQRPTDREVALQRMAQSGAFVTTAESLVFMLMRSAAHPNFKKVSALTKTHFELPN 609 VGKL PA++ LLCD+QERF LIY+ +TVV+T+++L + + L IP++ATQQYT+AFGPT P A + E + P+FEKKLFSM+T EV L Q P+++ S +LFG E HVCVQQTCLDLLE G +VHV+ DG SSQ+P DREVALQRM +GA++TTA+S FML++SA HPNFK VS L H + N Sbjct: 51 VGKLSPATSCLLLCDIQERFSPLIYKTDTVVSTAQFLTSVGKALDIPIVATQQYTKAFGPTVPGCFADAADLEST--------PIFEKKLFSMMTPEVLDHLAQ--PNMKDRTSFLLFGIEAHVCVQQTCLDLLEMGHDVHVIVDGVSSQQPIDREVALQRMMGAGAYLTTAQSAAFMLVKSAEHPNFKAVSKLVIEHMKKTN 243 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig103.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig103.2.1 >prot_H-akashiwo_Contig103.2.1 ID=prot_H-akashiwo_Contig103.2.1|Name=mRNA_H-akashiwo_Contig103.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=132bp MITDEVGTALDQCGPSLRSVVLFGQETHVCVQQTCLDLLERGLEVHVVADback to top mRNA from alignment at H-akashiwo_Contig103:107986..108908+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig103.2.1 ID=mRNA_H-akashiwo_Contig103.2.1|Name=mRNA_H-akashiwo_Contig103.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=923bp|location=Sequence derived from alignment at H-akashiwo_Contig103:107986..108908+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig103:107986..108908+ >mRNA_H-akashiwo_Contig103.2.1 ID=mRNA_H-akashiwo_Contig103.2.1|Name=mRNA_H-akashiwo_Contig103.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=396bp|location=Sequence derived from alignment at H-akashiwo_Contig103:107986..108908+ (Heterosigma akashiwo CCMP452)back to top |