mRNA_H-akashiwo_Contig1029.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK) HSP 1 Score: 411 bits (1056), Expect = 5.590e-141 Identity = 201/281 (71.53%), Postives = 233/281 (82.92%), Query Frame = 1 Query: 109 LHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMIAVYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAATTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDN 951 LH+ L F RS +ESCLY H G + M+AVYVDDLV+S + +VVS K S AS++S+TD G L ILGIKV RD+RNKCF+LSQ SFI+DA++KFGLD+LPAC+TP+ DLTPTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYLKGTQSE LRLGGDLVLRA++D+DFC DR+DGKSVTGY++ LGD+PIVW+SKLQ A TTSTVEAEYLALRS +KDIMWLR LL ++ CPQ EPTPV+EDN Sbjct: 3 LHDHLESLGFKRSGHESCLYI--HRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDN 281
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: A0A7S3Y3B6_HETAK (Hypothetical protein (Fragment) n=6 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3B6_HETAK) HSP 1 Score: 314 bits (805), Expect = 3.750e-102 Identity = 151/169 (89.35%), Postives = 164/169 (97.04%), Query Frame = 1 Query: 1 VKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYNTLHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMIAVYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKSSLPDSN 507 VKQPPGFVDKDHP+KVWKLKKALYGLRQSP+LWYNTLHEFLL+QNFVRSDYESCLYTRK+SVTGED+M+AVYVDDLVLSSNIPSVVS+LK+SF SRFSITDLGPL SILGIKV+RD NKCFYLSQASF+RDAISKFGLD+LPACRTPMT ATDLTPTPGFK+SLPD+N Sbjct: 241 VKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTNKCFYLSQASFVRDAISKFGLDYLPACRTPMTNATDLTPTPGFKASLPDAN 409
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK) HSP 1 Score: 305 bits (781), Expect = 1.630e-100 Identity = 147/218 (67.43%), Postives = 174/218 (79.82%), Query Frame = 1 Query: 1 VKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYNTLHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMIAVYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYL 654 V+QPP +VD HPNKVWKL KALYGL+QSP++WY LH+ L F RS +ESCLY H G + M+AVYVDDLV+S + ++VS K S AS++++TD G L ILGIKV RD+RNKCF+LSQ SFI+DA++KFGLD+LPAC+TP+ DLTPTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYL Sbjct: 53 VRQPPSYVDPQHPNKVWKLNKALYGLKQSPRVWYMELHDHLESLGFKRSGHESCLYI--HRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK) HSP 1 Score: 253 bits (647), Expect = 1.870e-73 Identity = 134/319 (42.01%), Postives = 203/319 (63.64%), Query Frame = 1 Query: 1 VKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYNTLHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMIAVYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKSSLP--DSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAATTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDN 951 +KQP G+ +KV KLKK+LYGL+Q+PK WY L+ FLL+Q + R+ Y+SC+Y+ K S TG ++I+VYVDD+VL+S+ S +S +K + + ++++D+G ++SILGIKV RDR + LSQ SFI +A KF + P+ D+ L ++ ++RS+VGT+ W+A WT PE+A+++H L + ++P A+ RYL T+ + + LGG L L AY DADFC +R G+S +G+ I LG SPI+W+S++Q T +T EAEY++LR+ + D+MWL+ LL L Q P+ EDN Sbjct: 611 MKQPEGYEVPGMEHKVLKLKKSLYGLKQAPKCWYQNLNGFLLQQGYTRNGYDSCVYS-KVSSTGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDN 927
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: UPI000BBE8B6F (uncharacterized protein LOC111201737 n=2 Tax=Brassica napus TaxID=3708 RepID=UPI000BBE8B6F) HSP 1 Score: 219 bits (559), Expect = 1.800e-65 Identity = 125/314 (39.81%), Postives = 182/314 (57.96%), Query Frame = 1 Query: 7 QPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYNTLHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMIAVYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLGG--DLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAATTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVI 942 QPPGFVDKD+PN V KL+KA+YGL+Q+P+ WYN L FLL+ F+ S ++ L+ ++ G + VYVDD++++ + P + S + RFSI DLGPL LGI+V R +LSQ +I D + + + + TPM T L+ T G S + D RYR VG+L +++ TRP++AF V+KL +Y P +H+ A +R RYL GT+S + + L A+TDAD+ +R D S YV+ LG P+ W+SK QT S+ EAEY ++ S ++ W+ LL +L V TP I Sbjct: 3 QPPGFVDKDNPNAVCKLRKAIYGLKQAPRAWYNELRTFLLQSGFINSLADASLFV--YNTNGVYLYMLVYVDDIIITGSSPQHIDQFINSLSQRFSIKDLGPLSYFLGIEVQRSSNG--LHLSQHRYITDLLQRMQMSTTNSVSTPMCPNTTLSLTSG--SVMDDPTRYRMAVGSLQYLS-LTRPDIAFAVNKLSQYMHQPTTEHWTAVKRVLRYLSGTRSHGITFSSRHNPTLHAFTDADWAGNRDDYTSTGAYVVYLGSHPVAWSSKKQTGVARSSTEAEYRSVASTAAELCWITSLLHELGI--VSQTPAI 307
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: A0A7S3Y3C5_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3C5_HETAK) HSP 1 Score: 220 bits (561), Expect = 2.990e-65 Identity = 106/119 (89.08%), Postives = 115/119 (96.64%), Query Frame = 1 Query: 1 VKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYNTLHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMIAVYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRN 357 VKQPPGFVDKDHP+KVWKLKKALYGLRQSP+LWYNTLHEFLL+QNFVRSDYESCLYTRK+SVTGED+M+AVYVDDLVLSSNIPSVVS+LK+SF SRFSITDLGPL SILGIKV+RD N Sbjct: 312 VKQPPGFVDKDHPHKVWKLKKALYGLRQSPRLWYNTLHEFLLQQNFVRSDYESCLYTRKNSVTGEDTMVAVYVDDLVLSSNIPSVVSSLKSSFVSRFSITDLGPLTSILGIKVSRDHTN 430
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: A0A507DKM5_9FUNG (DNA-directed DNA polymerase (Fragment) n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DKM5_9FUNG) HSP 1 Score: 212 bits (539), Expect = 1.200e-62 Identity = 119/306 (38.89%), Postives = 179/306 (58.50%), Query Frame = 1 Query: 64 ALYGLRQSPKLWYNTLHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMIAVYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTP--TPGFKSSL-PDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLV-LRAYTDADFCQDRIDGKSVTGYVIMLGDS-PIVWASKLQTAATTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQ-----VEPTPVIEDN 951 ALYGL+Q+P+ WY+ LH+ L F R ++ +Y R + I+VYVDDL++ + S +S++KTS + F++TDLG ++ LG++V RD YL Q S++ D + +FG+ TPM T L P K+S P YR +VG+L ++ TRP++A V L R+ SNP P+H +AA+R RYL+GT L +GG+ V L Y+DAD+ + ID +S+TGY+ +G++ P+ WASK Q S+ EAEY+AL ++ +WL LL +L P+ PT + EDN Sbjct: 1 ALYGLKQAPRKWYSLLHKELTSLGFKRLANDNAVYIRTLPKSDSSQYISVYVDDLLIFAKTKSEISSIKTSLHNEFNMTDLGEVNHYLGMRVRRDYSRHVIYLDQESYVNDILERFGMQDCKPVNTPM-DRTKLEPYEVENTKTSPNPQEGEYRKIVGSLVYLMICTRPDIAVAVSMLSRFASNPSPQHLQAAKRVLRYLRGTSDYSLCIGGNNVTLHGYSDADWGNNIIDRRSITGYLFYIGNAGPVTWASKRQPTVALSSTEAEYMALSFATQETIWLCSLLQELQIPEYLDENARPTTIYEDN 305
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: A0A0F8A052_9HYPO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hirsutella minnesotensis 3608 TaxID=1043627 RepID=A0A0F8A052_9HYPO) HSP 1 Score: 208 bits (529), Expect = 4.460e-60 Identity = 121/318 (38.05%), Postives = 175/318 (55.03%), Query Frame = 1 Query: 1 VKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYNTLHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMIAVYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRLGGDLV-LRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAATTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDN 951 ++QP GF KD ++V +LKKA+YGL+Q+P++W+ T+ +FL + + ++ R S+ IA+YVDDL+L+ P V +K + + RF +TDLGP LGIKVTRDR + LSQ ++I + + + TPM P + + D Y VG+L + TR ++ F+V RY +NP P+H A +R RYLKGT L L G L ++ YTDADF D +S +G+ LG + I W SK Q T S+ EAEY+AL ++ +WLR L+ DL PQ PT + EDN Sbjct: 133 LEQPQGF--KDGTSRVCRLKKAIYGLKQAPRIWFQTISKFLETLGYRPIAADVSVFVRGKSI------IAIYVDDLLLTGACPREVQRIKDALSRRFQMTDLGPCSHYLGIKVTRDRARRRIELSQRAYIEKVLRTYNMSDCNPADTPMAADPLQPPAEDWHAHPKDQTAYAKRVGSLMYAMLGTRSDICFSVGACCRYLANPTPQHQTAVKRIMRYLKGTIDSVLVLEGPLQPIQGYTDADFAADLHTRRSTSGFFYSLGSAAISWTSKRQPCVTLSSTEAEYVALTQSAQEAIWLRSLMKDLCHPQAGPTVIHEDN 442
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 208 bits (530), Expect = 1.320e-59 Identity = 117/332 (35.24%), Postives = 182/332 (54.82%), Query Frame = 1 Query: 1 VKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYNTLHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMI-----AVYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATD--LTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERLRL--------GGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAATTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDN 951 + QP GFVD++HP V KLKK+LYGL+QS + W TL FL + + +S+ ++C+Y + S+ ++ I AVYVDD++ SN ++++ K F +TD G + ILG+ + RDR K ++SQ ++ + +FG+ TP+ T GF D N Y+ +G L +++ TRP+++ V L Y SNP +H+ +R RY+KGT + L+ GD L Y+DA++ D +S +GYV + +S + W SK Q + T ST EAEY+AL ++ +W+R LL D+ C EPT + EDN Sbjct: 141 MSQPDGFVDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVK--SIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLETTYHKRTEEEEGF-----DKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGD-ELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDN 464
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Match: A0A0L9TAH8_PHAAN (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9TAH8_PHAAN) HSP 1 Score: 207 bits (526), Expect = 2.710e-59 Identity = 120/320 (37.50%), Postives = 181/320 (56.56%), Query Frame = 1 Query: 1 VKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYNTLHEFLLEQNFVRSDYESCLYTRKHSVTGEDSMIA-VYVDDLVLSSNIPSVVSNLKTSFASRFSITDLGPLDSILGIKVTRDRRNKCFYLSQASFIRDAISKFGLDFLPACRTPMTTATDLTPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSERL--RLGGDLVLRAYTDADFCQDRIDGKSVTGYVIMLGDSPIVWASKLQTAATTSTVEAEYLALRSGLKDIMWLRHLLVDLSCPQVEPTPVIEDN 951 ++QP G+ K +KV KLKKALYGL+Q+P+ W + ++ NF++ YE LY + G+D +I +YVDDL+ + N PS+ K F +TD+G + LGI+V + NK +++Q S+ +D + KF +D TPM L+ + D Y+S+VG+L ++ TRP++ + V + RY P HF++A+R RY++GT S L + D L Y+D+D+ D D KS +G+V +GD+ W SK Q T ST EAEY+A S + +WLR+LL +LS PQVEPT + DN Sbjct: 155 IEQPQGYEVKGEEDKVLKLKKALYGLKQAPRAWNVQIDKYFKAANFIKCPYEHALYIKAQ---GKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTMEFEMTDMGLMAYYLGIEVKQG--NKGIFITQESYAKDVLKKFKMDDANLVGTPMECGIKLSKDE--EGEKVDPTLYKSLVGSLRYLT-CTRPDILYAVGVVSRYMEAPTTTHFKSAKRILRYIQGTTSYGLYYSISNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAVWLRNLLKELSLPQVEPTKIFVDN 466 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1029.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1029.3.1 >prot_H-akashiwo_Contig1029.3.1 ID=prot_H-akashiwo_Contig1029.3.1|Name=mRNA_H-akashiwo_Contig1029.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=317bp VKQPPGFVDKDHPNKVWKLKKALYGLRQSPKLWYNTLHEFLLEQNFVRSDback to top mRNA from alignment at H-akashiwo_Contig1029:290387..291337- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1029.3.1 ID=mRNA_H-akashiwo_Contig1029.3.1|Name=mRNA_H-akashiwo_Contig1029.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=951bp|location=Sequence derived from alignment at H-akashiwo_Contig1029:290387..291337- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1029:290387..291337- >mRNA_H-akashiwo_Contig1029.3.1 ID=mRNA_H-akashiwo_Contig1029.3.1|Name=mRNA_H-akashiwo_Contig1029.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=951bp|location=Sequence derived from alignment at H-akashiwo_Contig1029:290387..291337- (Heterosigma akashiwo CCMP452)back to top |