mRNA_H-akashiwo_Contig1028.5.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1028.5.1
Unique NamemRNA_H-akashiwo_Contig1028.5.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1028.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1028contigH-akashiwo_Contig1028:184120..203715 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size636
Hectar predicted targeting categoryother localisation
Exons5
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-26_005480.1
Cds size537
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1028.5.1prot_H-akashiwo_Contig1028.5.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1028 184170..203666 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387055.9029508-UTR-H-akashiwo_Contig1028:184119..1841691681387055.9029508-UTR-H-akashiwo_Contig1028:184119..184169Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1028 184120..184169 -
1681387055.9554365-UTR-H-akashiwo_Contig1028:203666..2037151681387055.9554365-UTR-H-akashiwo_Contig1028:203666..203715Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1028 203667..203715 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387055.9124787-CDS-H-akashiwo_Contig1028:184169..1843491681387055.9124787-CDS-H-akashiwo_Contig1028:184169..184349Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1028 184170..184349 -
1681387055.9219606-CDS-H-akashiwo_Contig1028:198546..1986371681387055.9219606-CDS-H-akashiwo_Contig1028:198546..198637Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1028 198547..198637 -
1681387055.9302673-CDS-H-akashiwo_Contig1028:202555..2026481681387055.9302673-CDS-H-akashiwo_Contig1028:202555..202648Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1028 202556..202648 -
1681387055.9381785-CDS-H-akashiwo_Contig1028:203311..2033981681387055.9381785-CDS-H-akashiwo_Contig1028:203311..203398Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1028 203312..203398 -
1681387055.9466927-CDS-H-akashiwo_Contig1028:203580..2036661681387055.9466927-CDS-H-akashiwo_Contig1028:203580..203666Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1028 203581..203666 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1028.5.1

>prot_H-akashiwo_Contig1028.5.1 ID=prot_H-akashiwo_Contig1028.5.1|Name=mRNA_H-akashiwo_Contig1028.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=179bp
MAQQGRYSQLLPSHLENDVRMTIQPIKFCQLFGFQHMIGVGITRRLYFLS
MIFNTAFWFIVMIDSLAYGIEHSSAVTAIAALIICPLAWLIWSYTIRVLC
ELAVVVLTLPATLGGTNQQPMGLPSAMHNTTAASNIHGTEMNNRNAMPIT
TAEVTRQEEIGLSINNSNDSRKGGIADV*
back to top

mRNA from alignment at H-akashiwo_Contig1028:184120..203715-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1028.5.1 ID=mRNA_H-akashiwo_Contig1028.5.1|Name=mRNA_H-akashiwo_Contig1028.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=19596bp|location=Sequence derived from alignment at H-akashiwo_Contig1028:184120..203715- (Heterosigma akashiwo CCMP452)
CTCAAACAAACTCGAGATAGAGATAATCACAGAGCCGCCCGAAAGAAGTA TGGCACAGCAAGGACGATACTCCCAGTTGCTTCCTTCGCATCTAGAAAAC GATGTGAGAATGACGATTCAGCCGATCAAATTTTGGTGGGTGGCGTAAAG TAACATGCTGAGCAATCTGAACCTGTCATTGCCACTTGCTGGTCACCCGC CGTTCTTCTCCGAACAAGAAATGGGAGAATGATATCTCTTCCCTGTTCAT GACTATCAAATATGCGCGGTTCTGTCGCGTTGCGACCTATCTACCCATTC ACTCTCTGCATGTTCAGCCAACTATTTGGGTTTCAGCATATGATTGGGGT TGGCATCACAAGGCGACTTTACTTCCTATCGATGATTTTCAATACAGCCT TCTGGTAAACTTGATTGCCCGATGTCTGACATGCGGTGAAAAAAAAGGAT GCACCCTATTAACTTTACCAAGATGCACCAAATACTAATTTGCAAACAAA ACATGCTAGTTCTCAACTCCATACTAGTAATATATCTTAAACCCCAGAGG AATCTACACTTCTTATACTCATAACAACCTTTATCAAAATAATCTGTTTT AATGAGAAGCACAAACCTTTGCCAGATCATGACGGCCTCATATTATATAT CTTTTAAGTAAACTTAGCTGTGCTGATGATACTTGGCTGAAAGGACCCCT AGGTTCCCCAAAGCTGCGGGTTGCCGAGCGCGCCTCCACATCTGGAAAAC TCCAGCAGCATTCCACAAAACTGCACCCCCCACAAACCACCATGCCCAGC CCGGCTGCAGCACCCAGTGCAGGCTCCACCACATCTGCTCCACTTGATGG GCCCTTAGGTGTTGTGAAAATGAATAAGCAGTATGGACAAAAGAAAATCA CCGCACCACTGATCACGCTTTGTACTATAGTAACAGTAGACAGTGCAAGC TATTTTCTCAAAGACTACTGTGTTATAACTGCATCCTCATTTATACAATC AAGCTACCTAATGCACCCAAAACACTATAATATGTATATAATATCACAAA AACATACATAATAAAAGGTTTATTGTGATGATCGATTCATTGGCATATGG AATAGAGCACAGCAGCGCAGTCACTGCAATTGCGGCCCTCATTATATGCC CACTGGCATGGTTGGTCCATTTTTCCACTGCGAGTATGAATCAATATTTT AGTATACAACCCATGTTGTGCTTACTTGTTTTCTTGATGTTGATGAGCAC ACACAATATATCATGGTGGGATTCAAATTCCTAGAACGGCTAATAACACA TTTTTTTCCATACACCACCACTCAGATGATCCAAAAATTTAGTGATGATC CCTTCTAACTCTACTATGTTGTTGCGCAAGCATCACCAGATGGACACCTG GCGGAGTGGGTCGCTGCGGTGGTTCGCCAGCCACTGTAGGTTTGGGAGGT GGAGAGGTAGAAGTAGATGAGTAGCAGCGGCCAATGATCAATATCCAATG ACATTGTTGTTGTTTTGGTGTGGAAATAATGAATTTAAATGGGGAACATA GATGCAGAGACGTTTTGGTTCCACAACCCAGCAGCAGCAGCAGCAGCAAT AGTGTGTACAGTGTATAGTATATGTGCTCATTTCCACAGATTGCAAAGGC TTTGTGCTGAACTTGCTACACTTTAGACCCCCCAGAAAAATGACCGAGCA TGTATTTTTCATCAGTGCTTCAATAACTATACGAGTGTGTAGTATTCTTC TGAACACTTAAAACTTTAGTGATACAAAAAAGAATATTTAATAATATGCA ATCATACATTATACAGATATACAGGAAGAAGTGGAGGAGCTCGGAGTTCG AGGATGGCGAGGGGATTGCCGTTCTCTTCTAGAGATAGCGGGGTGTGCTG TATTCTTGTTTGGATATAGCATGTTCTGTATTGATTCAGGTTTTGGGGTT TCATGTTTAAGTTTTAGTACATTACCTCATCAGGGACATCTGCATATATA GAAGATGCAAGGCGTATTGTTGTTAACTCGAAGAGTTGTTATTTTCCATC GTAAAGGTCTTATTTTCCATCCGCGAGCATCGTAAAGGCAAATACAGAGT CGCAATACAGGAGGACACATTGGAAAAAACGACGAACAACAATATAAATA TGAGAAATACCGACCCCCAGCATCGTTCGAAGAAGAAGAGTGATATAATG ATAATAATAATAATGGTAAGAGTTTTTTGCCACCTGTAATCCATTCAACT TGTCCTCGAAAATTTCCAAGGATTTTTCTGCCGGCTCTTATAGGTTTTGT TTGCGGGTTTGCATTTGAATTATCGCGCAACCTGTGTCAACCGAGGTTTT TTTTTCTTTTTCCCATGACTTATTATTCGGGACAAGCAAGAAGCTGTCGT CCCCCATACAAGAAAAGTGCAAATGAAATTGATGCATTGTCAATCCTACT CATCATACACTACTGGACAACACAACAACAACACCAGCAACCACTGCACA CAGAATACCATTTTTTTTTTTGTGATTTTTTGGTTCGAGACAAAACATCA GAACTAACTAAAGGAAAACAGAAAACCAATCGTACCACCATAATGACTAC TGCTACTACTACTAACAACAAATAATAATAATAATAATAAATAATAAAAA TAAAACAACGAAAACCAACCCAAAACAGAAACAAAACAAAGAGAACCGAG GAACCGAGGTATCACGGTATATTTGAACTTCGCCCACGCAATCTTATTTT TCTCTCCGCAATCATCGTGCCGGGGACCAACCAGCAAACGTGTGAAGAAG CGACCCTGTATCGTTCGGAGAACAGCTCGAAAATTTCAAGGATTTTTCTG CCGGCTCTTATAGGTTTTGTTTGCGGGTTTGCATTTGAATTATCGCGCAA CCTGTATCAACCGAGATATCACGGTATTTGAACTTCGCCCACGCGGTTCC AATGACATATTATGTCGTGCGATACTGGGCAGGTTTTTGGCTGCGCTAGT GGCCGTGCGCTATGGATATACCCCTAACCCAAGGTGTGAATTGTTACCCG AGCCTTGAGGTTTTGTAACTGTGTGCATTTTAAAAAATTCGTTTCTATTG TTGTTCGTCGTTTTTTTCCACTGTGTCCTCCTGTATTGCGACTCTGTATT TGCCTTATTCAAACTAAAACTCTCTTCGAGTTTTGGGCTGCAAGCCGCAG TTTTTTGGTTAAATTTAACTCTCTCTCTCTCTCTATAAATATATGTTGTT GGTGTGACAACTACCAACCTCTCTCTTTGAGTTTAAAAATGATAAAATTT GGCTGCTACAGCGCGCACCTGTATGCCACACCACTTTAAATGCCGATGGA AACTAGTCTCAATCTTTGGGAGGTTTGCCCCTCCTGTTCCGACTTTCGTT CCACACCATCTTCCCCCCTCTTGTCCAGACGTTTATTCCACACCATCAAT CAGTAGACAATAATGTGTGTGTGTTTTTTAAAGATGATGCGTTGGTGGTG CAGTAAACACTAGAGTCTGAATGTTTTTTGATAATCAGTTTATTCAAGGG GCTGCCACCTCAGCCCAGTCATGCTTGAGAGCCTTCTGCTATGCCGATCC GTGAGGACGTCATCACCCTTCTTCCCAAGTACAGCTTTCCTTGGTGATGA CGACGAGCTAGCTCTTTGGTTGATTGTTGCATTTTCGACTTGCTTGAGAC TTTGGTCATCATGTGAGTGCATGCTGTGGATTGTCCTCGGTCTACGTACC GATGAAGTGTTGTTAGTGGTTGAGCTGTCACTTTTTGGCTCATTGGGCCT GTAATGAGTTGTTACAGTGAATTTTTCTTGAAGAAGGAAAAATCCGGTCG TCCAGCATCATGTCTTGTTGCTTGTAATCATTTGCCCCCCCTCCCCATAG GGTACCACGTCGGGTTTGCCCGACAAGGCTGGCGTGGGCTGTTGGTGTTG CCCGTGTGCGAGAGAGGACTCAGCGGTCAGAGGACTTGAGCCCACCACCA TGAGTTCAGGCTGCACCAGATGGAACCCAAACAGAATTCAATGGACAGCA TTTTTGTGGATAACTTTTTGTAGATATACATGCTGCATGATGCTGCTGAT GATGTTAACTTCAGTTTGAAGTCTAAACTTTCAAACCACTTTAGGGGCAG AACCCCTAGCTTCTATAAGCAGACCCTTCCACGTCTATCTGCCATTTCTC AATACCACTACCCAATCATAATAAGAACACACGCACAAATACTTTCAGTA CCTCCCAAACTGTGCATGCATCATTGAACCCCTGTTGTGTACCCCAAATT AAGCATCCGTACCTACCACACGGCTTTTTCAGCCCCAGCTGGATATATCC TGCATATACATTACCAGAAGCCGTGGGGACTTCGGCTACACTCCTCCTGA ACAGATTTATAGATCGGCATGGCTTATGATAGTGTCTGCGCATTGTCATG CTCAGTCATCATATGCTCAGTCATCATTTGTTGTACTGTGTTTGGCCCAT TTTGGGGGGGCGTTCCCGGGGATTACTGTAGTACATGGAACAAAAACAAT AACATATGCAAATGGCAATGGCAATCAAGAAGCGGATTTGTTAGGGTAGT CAACTTCACTTTGTGGTCATATCTATGTGCTGTAGGTCGTAGTGGAACAG AGAGAGATGGTTTCCCCACCAGCACAGGGGGGGGACAGTTGCACCCAGAT GGGCCCTAAACAGAATTCACTGCAAAGTATTTTTGTGGGTAATGTATATG TATATGAACGGCTAGACTTGAAACTAAAATTAACATCATCATCATCATCA TGAATACGATGATGATGATAATTAGTTTATTTCATGTATATGTGTTATAC GTAGTATATTTATTATTATTATGCAATACTAGTATAATATATAAGTATAG TAGGATTATATTTAATTCATAGTAGTATAAGTTGCATCATCGCATCTTTA CATTTACACGGCTGTTGAGTAGAAACATGCTTAAAACAACTGATACGGAT TATATTTTGGAATAAAAGTAAAAACAAAGACCATCACAATGTAAGGCAGT TGCCCAGCCACACTCCGTCCCACTTCAGGCTGATCTGGAGTTACACAATC AGAGTTCTTTGTGAATTGGCGGTCGTGGTGCTGACCCTCCCTGCCACTCT TGGTGGCACTAATCAACAGGTGGTGGCTCTGTACATCATGTATCTTCATT CTTGTGAATGATGCTTGTTTGTTCGGTCAATGTTGCTTACTTGACCCAAT GGTATAATGGTATTGTCGTGATGAAGTAGTACTCTACAGCATCAATAAAT ACACTATATTTAATATATAAAGCACGTGGGTAAAGGTAGGGGCTTTCCCC CCCTGCAATCATCCAAAAGGCTGGGCTGAAAAAATGAAATCGCCACCATC GTCTTCATACTGATTTTGGAGGTGATTATACAATGCTATACAGTAGATAG TATTACATGTTGTACTTTCCAAAAAGAGAGGGTGATACTCCTTATCATAT CTTCTAGTGCTTGAAGAAGGCAATATATATATTATACATATAATCACATA GTCAAAATAAGACCTAAAATGCCAGCAGCCATATTATTACCCTATAGTAT AGTAATTTCATCGTATATACTTCAAAGATACCATCAACCTATTCTTGAGC GTCACGAGCAATTGTTGCATTAGTTGAGTGGAAAATACTACTACTAGTGT ACTACTCGTCATAATAATATATAAACACATCTAGAAATTGGCAAGGGTAA GTCTCTGTATAATATAGATGCTTCACTACTACTAACCAACCATGTTTATT TTTTCAATAATGTTCTGTTGTTGAATTTCAGCTATTTTTGATATTGGATC TACAACTCAGTACTAGCCGACTTGTTGACTAATCACTGAATAGACTCAAG CTCAAATATCTTCTTGATATTGCCAGTTGACTATGTCTTTACTCAGCAAA GCTTGGTTTCGCTTGCACTGTCACTGTCACACTATCTAGATTGTTTTTTC GTTAGCCCTCAACGGACCTTTCTGTGATAGATGATTTAATCTCGGTGCTC TGATGATGATCACCAGTATGGGCTGTTTTCTTTGTCTGATGGTTCAAGTT CAATAAGGAGTTCTAACTCTGCTTCTTATCATTCTCGGATTCATCTGATC TTGAAGTTGAATGGTTCATTTCTCGACCCAGACTTTGGACTCTATGTTGA AGTTGAATATCACAATACGACCTTGTGGTTCTTTCGACAACATCGTATTT GACTAAGTCTCTGTATAGGCCCCTATAGTCTTTATGTTTCTTCTTCTTAT GGCACCACCACCAGCAATCATCAAATGTAGTTTTTTGAAGGCCGCCGCCA TCGGCACAAGTGAGCGGGCACGTTGTTCATAGTAGTATACACCAACAACA CATCATTGCCATTTTACCACCACCTTGGGATAACGATGATCATTAAAACA ACTGAACAAGAAAGCCATCTAGTTAGTCCCTCTGATTTGACATTGAGGTT TTGAGTGAATCGAACTTACCACTGCTTGCCCTGCTGGAACGACAGGTACT GGGCCCACTAAATCCAAAAGGAGACGACACTGACCGAAACTCAATGAAGA CAATCATGGCTATTGGATCGCTGAACTGCACTGTTTCGAAGATCGCTGAC TCAAAGAAAAGGAAATGACTGAACTGAAGCAACAGGCTACAACAATGTTC ATGGGCATTGAAGAACAATCTACTGCTGATGAAGAAGACTCTTCTACAGA ACTGAGAGAGGACCAGGGTTGGTAACTCAGCATCATCTTGAAATTCTGGG AGATTGATATCCACTCCACATGGAAATCACAGTGGCTAACAATCTAGAGG GGATGTTGTTGAATTTCAGCTATTTTGATATTGGATCTACAACTCAGTAC TAGCCGACTTGTTGACTAATCACTGAATAGACTCAAGCTCAAATATCTTC TTGATATTGCCAGTTGACTATGTCTTTACTCAGCAAAGCTTGGTTTCGCT TGCACTGTCACTGTCACACTATCTAGATTGTTTTTTCGTTAGCCCTCAAC GGACCTTTCTGTGATAGATGACGAATCTCGGGTGCTCTGATGATGATCAC CAGTATGGGCTGTTTTCTTTGTCTGATGGTTCAAGTTCAATAAGGAGTTC TAACTCTGCTTCTTATCATTCTCGGATTCATCTGATCTTGAAGTTGAATG GTTCATTTCTCGACCCAGACTTTGGACTCTATGTTGAAGTTGAATATCAC AATCTGACCTTGTGGTTCTTTCGACAACATCGTATTTGACTGAGTCTCTG TATAGGCCCCTATAGTCTTTATGTTTCTTCTTCTTATGGCACCACCACCA GCAATCATCAAATGTAGTTTTTGAAGGCCGCCGCCATCGGCACAAGTGAG CGGGCACGTTGTTCATAGTAGTATACACCAACAACACATCATTGCCATTT TACCACCACCTTGGGATAACGATGATCATTAAAACAACTGAACAAGAAAG CCATCTAGTTAGTCCCTCTGATTTGACATTGAGGTTTTGAGTGAATCGGA ACTTACCACTGCTTGCCCTGCTGGAACGACAGGTACTGGGCCCACTAAAT CCGCAAAAGGAGACGACACTGACCGAAACTCAATGAAGAAGATCATGGCT ATTGGATCGCTGAACTGCACTGTTTCGAAGATCGCTGACTCAAAGAAAAG GAAATGACTGAACTGAAGCAACAGGCTACAACAATGTTCATGGGCATTGA AGAACAATCTACTGCTGATGAAGAAGACTCTTCTACAGAACTGAGAGAGG ACCAGGGTTGGTAACTCAGCATCATCTTGAAATTCTGGGAGATTGATATC CACTCCACATGGAAATTACAGTGGCTAACAATCTAGAGGGATGTTGTTGA ATTTCAGCTATTTTTGATATTGGATCTACAACTCAGTACTAGCCGACTTG TTGACTAATCACTGAATAGACTCAAGCTCAAATATCTTCTTGATATTGCC AGTTGACTATGTCTTTACTCAGCAAAGCTTGGTTTCGCTTTGCACTGTCA CTGTCACACTATCTAGATTGTTTTTTCGTTAGCCCTCAACGGACCTTTCT GTGATAGATGACGAATCTCGGGTGCTCTGATGATGATCACCAGTATGGGC TGTTTTCTTTGTCTGATGGTTCAAGTTCAATAAGGAGTTCTAACTCTGCT TCTTATCATTCTCGGATTCATCTGATCTTGAAGTTGAATGGTTCATTTCT CGACCCAGACTTTGGACTCTATGTTGAAGTTGAATATCACAATACGACCT TGTGGTTCTTTCGACAACATCGTATTTGACTAAGTCTCTGTATAGGCCCC TATAGTCTTTATGTTTCTTCTTCTTATGGCACCACCACCAGCAATCATCA AATGTAGTTTTTGAAGGCCGCCATCGGCACAAGTGAGCGGGCACGTTGTT CATAGTAGTATACACCAACAACACATCATTGCCATTTTACCACCACCTTG GGATAACGATGATCATTAAAACAACTGAACAAGAAAGCCATCTAGTTAGT CCCTCTGATTTGACATTGAGGTTTTGAGTGAATCGAACTTACCACTGCTT GCCCTGCTGGAACGACAGGTACTGGGCCCACTAAATCCGCAAAAAGGAGA CGACACTGACCGAAACTCAATGAAGACAATCATGGCTATTGGATCGCTGA ACTGCACTGTTTCGAAGATCGCTGACTCAAAGAAAAGGAAATGACTGAAC TGAAGCAACAGGCTACAACAATGTTCATGGGCATTGAAGAACAATCTACT GCTGATGAAGAAGACTCTTCTACAGAACTGAGAGAGGACCAGGGTTGGTA ACTCAGCATCATCTTGAAATTCTGGGAGATTGATATCCACTCCACATGGA AATCACAGTGGCTAACAATCTAGAGGGGATGTTGTTGAATTTCAGCTATT TTTGATATTGGATCTACAACTCAGTACTAGCCGACTTGTTGACTAATCAC TGAATAGACTCAAGCTCAAATATCTTCTTGATATTGCCAGTTGACTATGT CTTTACTCAGCAAAGCTTGGTTTCGCTTTTTTGCACTGTCACTGTCACAC TATCTAGATTGTTTTTTCGTTAGCCCTCAACGGACCTTTCTGTGATAGAT GACTTAATCTCGGGTGCTCTGATGATGATCACCAGTATGGGCTGTTTTCT TTGTCTGATGGTTCAAGTTCAATAAGGAGTTCTAACTCTGCTTCTTATCA TTCTCGGATTCATCTGATCTTGAAGTTGAATGGTTCATTTCTAATTCAGA CTTTGGACTCTATGTTGAAGTTGAATATCACAATCGACCTTGTGGTTCTT TTTCGACAACATCGTATTTGACTGAGTCTCTGTATAGGCCCCTATAGTCT TTATGTTTCTTCTTCTTATGGCACCACCACCAGTAATCATCAAATGTAGT TTTTGAAGGCCGCCATCGGGCAATAAGTGAGCGGGCACGTTGTTCATAGT AGTATACACCAACAACACATCATTGCCATTTTACCACCACCTTGGGATAA CGATGATCATTAAAACAACTGAACAAGAAAGCCATCTAGTTAGTCCCTCT GATTTGACATTGAGGTTTTGAGTGAATCGGAACTTACCACTGCTTGCCCT GCTGGAACGACAGGTACTGGGCCCACTAAATCCGCAAAAGGAGACGACAC TGACCGAAACTCAATGAAGAAGATCATGGCTATTGGATCGCTGAACTGCA CTGTTTCGAAGATCGCTGACTCAAAGAAAAGGAAATGACTGAACTGAAGC AACAGGCTACAACAATGTTCATGGGCATTGAAGAACAATCTACTGCTGAT GAAGAAGACTCTTCTACAGAACTGAGAGAGGACCAGGGTTGGTAACTCAG CATCATCTTGAAATTCTGGGAGATTGATATCCACTCCACATGGAAATTAC AGTGGCTAACAATCTAGAGGGGATGTTGTTGAATTTCAGCTATTTTTGAT ATTGGATCTACAACTCAGTACTAGCCGACTTGTTGACTAATCACTGAATA GACTCAAGCTCAAATATCTTCTTGATATTGCCAGTTGACTATGTCTTTAC TCAGCAAAGCTTGGTTTCGCTTTTGCACTGTCACTGTCACACTATCTAGA TTGTTTTTTCGTTAGCCCTCAAACGAACCTTTCTGTGATAGATGACGAAA TCTCGGTGCTCTGATGATGATCACCAGTATGGGCTGTTTTCTTTGTCTGA TGGTTCAAGTTCAATAAGGAGTTCTAACTCTGCTTCTTATCATTCTCGGA TTCATCTGATCTTGAAGTTGAATGGTTCATTTCTAATTCCAGACTTTGGA CTCTATGTTGAAGTTGAATATCACAATCGACCTTGTGGTTCTTTCGACAA CATCGTCGTTTGACTAAGTCTCTGTATAGGCCCCCTATAGTCTTTATGTT TCTTCTTCTTATGGCACCACCACCAGCAATCATCAAATGTAGTTTTTGAA GGCCCGCCATCGGCACAAGTGAGCGGGCACGTTGTTCATAGTAGTATACA CCAACAACACATCATTGCCATTTTACCACCACCTTGGGATAACGATGATC ATTAAAACAACTGAACAAGAAAGCCATCTAGTTAGTCCCTCTGATTTGAC ATTGAGGTTTTGAGTGAATCGAACTTACCACTGCTTGCCCTGCTGGAACG ACAGGTACTGGGCCCACTAAATCCGCAAAAAGGAGACGACACTGACCGAA ACTCAATGAAGACAATCATGGCTATTGGATCGCTGAACTGCACTGTTTCG AAGATCGCTGACTCAAAGAAAAGGAAATGACTGAACTGAAGCAACAGGCT ACAACAATGTTCATGGGCATTGAAGAACAATCTACTGCTGATGAAGAAGA CTCTTCTACAGAACTGAGAGAGGACCAGGGTTGGTAACTCAGCATCATCT TGAAATTCTGGGAGATTGATATCCACTCCACATGGAAATCACAGTGGCTA ACAATCTAGAGGGGATGTTGTTGAATTTCAGCTATTTTTGATATTGGATC TACAACTCAGTACTAGCCGACTTGTTGACTAATCACTGAATAGACTCAAG CTCAAATATCTTCTTGATATTGCCAGTTGACTATGTCTTTACTCAGCAAA GCTTGGTTTCGCTTTGCACTGTCACTGTCACACTATCTAGATTGTTTTTT TCATTAGCCCTCAACGGACCTTTCTGTGATAGATGACGAATCTCGGTGCT CTGATGATGATCACCAGTATGGGCTGTTTTCTTTGTCTGATGGTTCAAGT TCAATAAGGAGTTCTAACTCTGCTTCTTATCATTCTCGGATTCATCTGAT CTTGAAGTTGAATGGTTCATTTCTCGACCCAGACTTTGGACTCTATGTTG AAGTTGAATATCACAATCACGACCTTGTGGTTCTTTCTCGACAACATCGT ATTTGACTGAGTCTCTGTATAGGCCCCTATAGTCTTTATGTTTCTTCTTC TTATGGCACCACCACCAGCAATCATCAAATGTAGTTTTTGAAGGTCACGC CATCGGCACAAGTGAGCGGGCACGTTGTTCATAGTAGTATACACCAACAA CACATCATTGCCATTTTACCACCACCTTGGGATAACGATGATCATTAAAA CAACTGAACAAGAAAGCCATCTAGTTAGTCCCTCTGATTTGACATTGAGG TTTTGAGTGAATCGAACTTACCACTGCTTGCCCTGCTGGAACGACAGGTA CTGGGGCCCACTAAATCCGCAAAAGGAGACGACACTGACCGAAACTCAAT GAAGAAGATCATGGCTATTGGATCGCTGAACTGCACTGTTTTTCAAGATC GCTGACTCAAAGAAAAGGAAATGACTGAACTGAAGCAACAGGCTACAACA ATGTTCATGGGCATTGAAGAACAATCTACTGCTGATGAAGAAGACTCTTC TACAGAACTGAGAGAGGACCAGGGTTGGTAACTCAGCATCATCTTGAAAT TCTGGGAGATTGATATCCACTCCACATGGAAATTACAGTGGCTAACAATC TAGAGGGATGTTGTTGAATTTCAGCTATTTTTGATATTGGATCTACAACT CAGTACTAGCCGACTTGTTGACTAATCACTGAATAGACTCAAGCTCAAAT ATCTTCTTGATATTGCCAGTTGACTATGTCTTTACTCAGCAAAGCTTGGT TTCGCTTGCACTGTCACTGTCACACTATCTAGATTGTTTTTTTCGCTAGC CCTCAAACGGACCTTTCTGTGATAGATGACGAATCTCGGGTGCTCTGATG ATGATCACCAGTATGGGCTGTTTTCTTTGTCTGATGGTTCAAGTTCAATA AGGAGTTCTAACTCTGCTTCTTATCATTCTCGGATTCATCTGATCTTGAA GTTGAATGGTTCATTTCTCGACCCAGACTTTGGACTCTATGTTGAAGTTG AATATCACAATACGACCTTGTGGTTCTTTCGACAACATCGTATTTGACTA AGTCTCTGTATAGGCCCCTATAGTCTTTATGTTTCTTCTTCTTATGGCAC CACCACCAGCAATCATCAAATGTAGTTTTTGAAGGCCGCCGCCATCGGCA CAAGTGAGCGGGCACGTTGTTCATAGTAGTATACACCAACAACACATCAT TGCCATTTTACCACCACCTTGGGATAACGATGATCATTAAAACAACTGAA CAAGAAAGCCATCTAGTTAGTCCCTCTGATTTGACATTGAGGTTTTGAGT GAATCGGAACTTACCACTGCTTGCCCTGCTGGAACGACAGGTACTGGGCC CACTAAATCCGCAAAAGGAGACGACACTGACCGAAACTCAATGAAGACAA TCATGGCTATTGGATCGCTGAACTGCACTGTTTCGAAGATCGCTGACTCA AAGAAAAGGAAATGACTGAACTGAAGCAACAGGCTACAACAATGTTCATG GGCATTGAAGAACAATCTACTGCTGATGAAGAAGACTCTTCTACAGAACT GAGAGAGGACCAGGGTTGGTAACTCAGCATCATCTTGAAATTCTGGGAGA TTGATATCCACTCCACATGGAAATCACAGTGGCTAACAATCTAGAGGGGA TGTTGTTGAATTTCAGCTATTTTTGATATTGGATCTACAACTCAGTACTA GCCGACTTGTTGACTAATCACTGAATAGACTCAAGCTCAAATATCTTCTT GATATTGCCAGTTGACTATGTCTTTACTCAGCAAAGCTTGGTTTCGCTTT TGCACTGTCACTGTCACACTATCTAGATTGTTTTTTCGTTAGCCCTCAAC GGACCTTTCTGTGATAGATGACTAATCTCGGTGCTCTGATGATGATCACC AGTATGGGCTGTTTTCTTTGTCTGATGGTTCAAGTTCAATAAGGAGTTCT AACTCTGCTTCTTATCATTCTCGGATTCATCTGATCTTGAAGTTGAATGG TTCATTTCTCGACCAGACTTTGGACTCTATGTTGAAGTTGAATATCACAA TACGACCTTGTGGTTCTTTCCGACAACATCGTATTTGACTGAGTCTCTGT ATAGGCCCCTATAGTCTTTATGTTTCTTCTTCTTATGGCACCACCACCAG TAATCATCAAATGTAGTTTTTGAAGGCCGCGCCATCGGCATAAGTGAGCG GGCACGTTGTTCATAGTAGTATACACCAACAACACATCATTGCCATTTTA CCACCACCTTGGGATAACGATGATCATTAAAACAACTGAACAAGAAAGCC ATCTAGTTAGTCCCTCTGATTTGACATTGAGGTTTTGAGTGAATCGGAAC TTACCACTGCTTGCCCTGCTGGAACGACAGGTACTGGGCCCACTAAATCC GCAAAAGGAGACGACACTGACCGAAACTCAATGAAGAAGATCATGGCTAT TGGATCGCTGAACTGCACTGTTTCGAAGATCGCTGACTCAAAGAAAAGGA AATGACTGAACTGAAGCAACAGGCTACAACAATGTTCATGGGCATTGAAG AACAATCTACTGCTGATGAAGAAGACTCTTCTACAGAACTGAGAGAGGAC CAGGGTTGGTAACTCAGCATCATCTTGAAATTCTGGGAGATTGATATCCA CTCCACATGGAAATTACAGTGGCTAACAATCTAGAGGGGATGTTGTTGAA TTTCAGCTATTTTTGATATTGGATCTACAACTCAGTACTAGCCGACTTGT TGACTAATCACTGAATAGACTCAAGCTCAAATATCTTCTTGATATTGCCA GTTGACTATGTCTTTTACTCAGCAAAGCTTGGTTTCGCTTGCACTGTCAC TGTCACACTATCTAGATTGTTTTTCGTTAGCCCTCAACGGAACCTTTCTG TGATAGATGACCAATCTCGGTGCTCTGATGATGATCACCAGTATGGGCTG TTTTCTTTGTCTGATGGTTCAAGTTCAATAAGGAGTTCTAACTCTGCTTC TTATCATTCTCGGATTCATCTGATCTTGAAGTTGAATGGTTCATTTCTAA CCCAGACTTTGGACTCTATGTTGAAGTTGAATATCACAATACGACCTTGT GGTTCTTTTCGACAACATCGTATTTGACTAAGTCTCTGTATAGGCCCCTA TAGTCTTTATGTTTCTTCTTCTTATGGCACCACCACCAGCAATCATCAAA TGTAGTTTTTGAAGGCCGCCATCGGCACAAGTGAGCGGGCACGTTGTTCA TAGTAGTATACACCAACAACACATCATTGCCATTTTACCACCACCTTGGG ATAACGATGATCATTAAAACAACTGAACAAGAAAGCCATCTAGTTAGTCC CTCTGATTTGACATTGAGGTTTTGAGTGAATCGAACTTACCACTGCTTGC CCTGCTGGAACGACAGGTACTGGGCCCACTAAATCCGCAAAAAAGGAGAC GACACTGACCGAAACTCAATGAAGACAATCATGGCTATTGGATCGCTGAA CTGCACTGTTTCGAAGATCGCTGACTCAAAGAAAAGGAAATGACTGAACT GAAGCAACAGGCTACAACAATGTTCATGGGCATTGAAGAACAATCTACTG CTGATGAAGAAGACTCTTCTACAGAACTGAGAGAGGACCAGGGTTGGTAA CTCAGCATCATCTTGAAATTCTGGGAGATTGATATCCACTCCACATGGAA ATCACAGTGGCTAACAATCTAGAGGGATGTTGTTGAATTTCAGCTATTTT TGATATTGGATCTACAACTCAGTACTAGCCGACTTGTTGACTAATCACTG AATAGACTCAAGCTCAAATATCTTCTTGATATTGCCAGTTGACTATGTCT TTACTCAGCAAAGCTTGGTTTCGCTTTGCACTGTCACTGTCACACTATCT AGATTGTTTTTTCGTTAGCCCTCAACGGACCTTTCTGTGATAGATGACGA ATCTCGGTGCTCTGATGATGATCACCAGTATGGGCTGTTTTCTTTGTCTG ATGGTTCAAGTTCAATAAGGAGTTCTAACTCTGCTTCTTATCATTCTCGG ATTCATCTGATCTTGAAGTTGAATGGTTCATTTCTCGACCCAGACTTTGG ACTCTATGTTGAAGTTGAATATCTGTCTGACCTTGTGGTTCTTTTCGACA ACATCGTATTTGACTGAGTCTCTGTATAGGCCCCTATAGTCTTTATGTTT CTTCTTCTTATGGCACCACCACCAGCAATCATCAAATGTAGTTTTTGAAG GCCGCCGCCATCGGCATAATTGAGCGGGCACGTTGTTCATAGTAGTATAC ACCAACAACACATCATTGCCATTTTACCACCACCTTGGGATAACGATGAT CATTAAAACAACTGAACAAGAAAGCCATCTAGTTAGTCCCTCTGATTTGA CATTGAGGTTTTGAGTGAATCGGAACTTACCACTGCTTGCCCTGCTGGAA CGACAGGTACTGGGCCCACTAAATCCGCAAAAGGAGACGACACTGACCGA AACTCAATGAAGACAATCATGGCTATTGGATCGCTGAACTGCACTGTTTC GAAGATCGCTGACTCAAAGAAAAGGAAATGACTGAACTGAAGCAACAGGC TACAACAATGTTCATGGGCATTGAAGAACAATCTACTGCTGATGAAGAAG ACTCTTCTACAGAACTGAGAGAGGACCAGGGTTGGTAACTCAGCATCATC TTGAAATTCTGGGAGATTGATATCCACTCCACATGGAAATCACAGTGGCT AACAATCTAGAGGGGATGTTGTTGAATTTCAGCTATTTTTGATATTGGAT CTACAACTCAGTACTAGCCGACTTGTTGACTAATCACTGAATAGACTCAA GCTCAAATATCTTCTTGATATTGCCAGTTGACTATGTCTTTACTCAGCAA AGCTTGGTTTCGCTTGCACTGTCACTGTCACACTATCTAGATTGTTTTTT TCGTTAGCCCTCAACGGACCTTTCTGTGATAGATGACGAATCTCGGTGCT CTGATGATGATCACCAGTATGGGCTGTTTTCTTTGTCTGATGGTTCAAGT TCAATAAGGAGTTCTAACTCTGCTTCTTATCATTCTCGGATTCATCTGAT CTTGAAGTTGAATGGTTCATTTCTCGACCCAGACTTTGGACTCTATGTTG AAGTTGAATATCACAATGACCCTTGTGGTTCTTTCGACAACATCGTATTT GACTAAGTCTCTGTATAGGCCCCTATAGTCTTTATGTTTCTTCTTCTTAT GGCACCACCACCAGCAATCATCAAATGTAGTTTTTGAAGGCCGCCATCGG CACAAGTGAGCGGGCACGTTGTTCATAGTAGTATACACCAACAACACATC ATTGCCATTTTACCACCACCTTGGGATAACGATGATCATTAAAACAACTG AACAAGAAAGCCATCTAGTTAGTCCCTCTGATTTGACATTGAGGTTTTGA GTGAATCGAACTTACCACTGCTTGCCCTGCTGGAACGACAGGTACTGGGC CCACTAAATCCAAAAAAGGAGACGACACTGACCGAAACTCAATGAAGACA ATCATGGCTATTGGATCGCTGAACTGCACTGTTTCGAAGATCGCTGACTC AAAGAAAAGGAAATGACTGAACTGAAGCAACAGGCTACAACAATGTTCAT GGGCATTGAAGAACAATCTACTGCTGATGAAGAAGACTCTTCTACAGAAC TGAGAGAGGACCAGGGTTGGTAACTCAGCATCATCTTGAAATTCTGGGAG ATTGATATCCACTCCACATGGAAATCACAGTGGCTAACAATCTAGAGGGG ATGTTGTTGAATTTCAGCTATTTTTGATATTGGATCTACAACTCAGTACT AGCCGACTTGTTGACTAATCACTGAATAGACTCAAGCTCAAATATCTTCT TGATATTGCCAGTTGACTATGTCTTTACTCAGCAAAGCTTGGTTTCGCTT GCACTGTCACTGTCACACTATCTAGATTGTTTTTTCGTTAGCCCTCAACG GACCTTTCTGTGATAGATGACGAATCTCGGGTGCTCTGATGATGATCACC AGTATGGGCTGTTTTCTTTGTCTGATGGTTCAAGTTCAATAAGGAGTTCT AACTCTGCTTCTTATCATTCTCGGATTCATCTGATCTTGAAGTTGAATGG TTCATTTCTAACCCAGACTTTGGACTCTATGTTGAAGTTGAATATCTGTC GACCTTGTGGTTCTTTCGACAACATCGTATTTGACTAAGTCTCTGTATAG GCCCCTATAGTCTTTATGTTTCTTCTTCTTATGGCACCACCACCAGCAAT CATCAAATGTAGTTTTTGAAGGCCGCCGCCATCGGCATAATTGAGCGGGC ACGTTGTTCATAGTAGTATACACCAACAACACATCATTGCCATTTTACCA CCACCTTGGGATAACGATGATCATTAAAACAACTGAACAAGAAAGCCATC TAGTTAGTCCCTCTGATTTGACATTGAGGTTTTGAGTGAATCGGAACTTA CCACTGCTTGCCCTGCTGGAACGACAGGTACTGGGCCCACTAAATCCGCA AAAAAGGAGACACTGACTGACCGAAACTCAATGAAGACAATCATGGCTAT TGGATCGGTGAATTGCACTGTTTCGAAGATCGCTGACTCAAAGAAAAGGA AATGACTGAACTGAAGCAACAGGCTACAACAATGTTCATGGGCATTGAAG AACAATCTACTGCTGATGAAGAAGACTCTTCTACAGAACTGAGAGAGGAC CAGGGTTGGTAACTCAGCATCATCTTGAAATTCTGGGAGATTGATATCCA CTCCACATGGAAATTACAGTGGCTAACAATCTAGAGGGGATGTTGTTGAA TTTCAGCTATTTTTGATATTGGATCTACAACTCAGTACTAGCCGACTTGT TGACTAATCACTGAATAGACTCAAGCTCAAATATCTTCTTGATATTGCCA GTTGACTATGTCTTTACTCAGCAAAGCTTGGTTTCGCTTGCACTGTCACT GTCACACTATCTAGATTGTTTTTTCGTTAGCCCTCAACGGACCTTTCTGT GATAGATGACGAATCTCGGGTGCTCTGATGATGATCACCAGTATGGGCTG TTTTCTTTGTCTGATGGTTCAAGTTCAATAAGGAGTTCTAACTCTGCTTC TTATCATTCTCGGATTCATCTGATCTTGAAGTTGAATGGTTCATTTCTCG ACCCAGACTTTGGACTCTATGTTGAAGTTGAATATCACAATACGACCTTG TGGTTCTTTCGACAACATCGTATTTGACTAAGTCTCTGTATAGGCCCCTA TAGTCTTTATGTTTCTTCTTCTTATGGCACCACCACCAGCAATCATCAAA TGTAGTTTTTGAAGGCCGCCGCCATCGGCATAATTGAGCGGGCACGTTGT TTATAGTAGTATACACCAACAACACATCATTGCCATTTTACCACCACCTT GGGATAACGATGATCATTAAAACTGAACAAGAAAGCCATCTAGTTAGTCC CTCTGATTTGACATTGAGGTTTTGAGTGAATCGGAACTTACCACTGCTTG CCCTGCTGGAACGACATGTTCCCCCCCTCCTGTCACACAAAAAAAAGAAA ACAACCACCATCTTGTATTTATTAGTATATACATAGTATATGCACAAACA ATGTATAAAGAAGAACATGGCCACTGGAGATAGCTTAATCAACTAGAAAG CCCCACATGCAGTAGTTCATGCATAGTTCACCCATATAGAAGAAATTGCC TGATCAATAATCTCTAGGAGCCTATTGAATAATATAGTACGATAATATGG TGATATAGTGAAGTACATGCTATGGCCATATGTTGCTTCAGCCAGCCATG CAAGCAATTAAATCATCAAACAACTGAGCAATCATCAATACTGTTGTAAA AAATAAACAAACACAGCCAATGGGACTTCCATCTGCTATGCACAACACTA CAGCTGCTAGTAATATACACGGCACAGAAATGAACAATCGTAATGCCATG CCCATTACTACTGCAGAAGTAACACGCCAAGAGGAAATAGGGCTTTCAAT AAACAACAGTAACGATTCAAGGAAGGGTGGTATTGCTGATGTATGATGAT GGTCGCCTAGTATAGTAGCTTTTACTTGCCATAATATTTTTCTTTG
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1028:184120..203715-

>mRNA_H-akashiwo_Contig1028.5.1 ID=mRNA_H-akashiwo_Contig1028.5.1|Name=mRNA_H-akashiwo_Contig1028.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=537bp|location=Sequence derived from alignment at H-akashiwo_Contig1028:184120..203715- (Heterosigma akashiwo CCMP452)
ATGGCACAGCAAGGACGATACTCCCAGTTGCTTCCTTCGCATCTAGAAAA
CGATGTGAGAATGACGATTCAGCCGATCAAATTTTGCCAACTATTTGGGT
TTCAGCATATGATTGGGGTTGGCATCACAAGGCGACTTTACTTCCTATCG
ATGATTTTCAATACAGCCTTCTGGTTTATTGTGATGATCGATTCATTGGC
ATATGGAATAGAGCACAGCAGCGCAGTCACTGCAATTGCGGCCCTCATTA
TATGCCCACTGGCATGGCTGATCTGGAGTTACACAATCAGAGTTCTTTGT
GAATTGGCGGTCGTGGTGCTGACCCTCCCTGCCACTCTTGGTGGCACTAA
TCAACAGCCAATGGGACTTCCATCTGCTATGCACAACACTACAGCTGCTA
GTAATATACACGGCACAGAAATGAACAATCGTAATGCCATGCCCATTACT
ACTGCAGAAGTAACACGCCAAGAGGAAATAGGGCTTTCAATAAACAACAG
TAACGATTCAAGGAAGGGTGGTATTGCTGATGTATGA
back to top