prot_H-akashiwo_Contig1027.7.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1027.7.1
Unique Nameprot_H-akashiwo_Contig1027.7.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length41
Homology
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: A0A6H5KXY4_9PHAE (YjgF_endoribonc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXY4_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.140e-10
Identity = 25/39 (64.10%), Postives = 34/39 (87.18%), Query Frame = 0
Query:    1 MFGTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEEG 39
            +F   FGE+G+HSR+AVGTN+LP+ +PVEIEAIVE ++G
Sbjct:  134 LFAEVFGERGVHSRSAVGTNALPMNVPVEIEAIVEFDDG 172          
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: A0A4D9CNR0_9STRA (YjgF_endoribonc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNR0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 7.230e-10
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MFGTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEE 38
             F   FG+KG+H+R+AVGTN+LPL IPVEIEAIVEVE+
Sbjct:  117 FFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 154          
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: A0A4D9CNR9_9STRA (YjgF_endoribonc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNR9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.180e-9
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MFGTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEE 38
             F   FG+KG+H+R+AVGTN+LPL IPVEIEAIVEVE+
Sbjct:  147 FFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 184          
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: W7TB75_9STRA (Endoribonuclease l-psp n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TB75_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.160e-9
Identity = 27/38 (71.05%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MFGTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEE 38
             F   FG+KG+H+R+AVGTN+LPL IPVEIEAIVEVE+
Sbjct:  198 FFVQVFGDKGVHARSAVGTNALPLNIPVEIEAIVEVED 235          
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: A0A2R5GI79_9STRA (Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI79_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.220e-9
Identity = 25/38 (65.79%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 MFGTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEE 38
            +F    GE+G+H+R+AVGTNSLPL IPVE+EAIVE+ E
Sbjct:  146 LFAEVLGERGLHARSAVGTNSLPLNIPVEVEAIVEISE 183          
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: A0A485KSR4_9STRA (Aste57867_10922 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KSR4_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 5.390e-9
Identity = 25/36 (69.44%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    3 GTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEE 38
            G  FGE+G+H+R+AVGTN+LPL IPVE+E IVEVE+
Sbjct:  136 GEIFGERGVHARSAVGTNALPLGIPVEVECIVEVED 171          
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: A0A0M0J7D8_9EUKA (Endoribonuclease l-psp n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7D8_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 6.180e-9
Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 0
Query:    1 MFGTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEE 38
            + G  FGE+G+H+R+AVGTNSLP  +PVEIE I EVE+
Sbjct:  103 LLGAVFGERGVHARSAVGTNSLPRNVPVEIELIAEVED 140          
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: A0A812PJA3_9DINO (TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812PJA3_9DINO)

HSP 1 Score: 57.4 bits (137), Expect = 7.050e-9
Identity = 24/39 (61.54%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    1 MFGTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEEG 39
            +FG  FG +G+H+R+A+GTN+LPL +PVEIEAIVE+  G
Sbjct:  144 LFGKVFGARGVHARSALGTNALPLNVPVEIEAIVELYPG 182          
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: A0A067CYL7_SAPPC (YjgF_endoribonc domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CYL7_SAPPC)

HSP 1 Score: 56.6 bits (135), Expect = 9.840e-9
Identity = 25/35 (71.43%), Postives = 31/35 (88.57%), Query Frame = 0
Query:    3 GTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVE 37
            G  FGE+G+H+R+AVGTN+LPL IPVE+E IVEVE
Sbjct:  132 GKIFGERGVHARSAVGTNALPLGIPVEVECIVEVE 166          
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Match: A0A2H5YEN0_9BACT (YjgF_endoribonc domain-containing protein n=1 Tax=bacterium HR23 TaxID=2035418 RepID=A0A2H5YEN0_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 2.180e-8
Identity = 27/38 (71.05%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 MFGTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEE 38
            +F   FGEKG H+R+AVG  SLP  IPVEIEAIVEVEE
Sbjct:  116 LFVAVFGEKGRHARSAVGMGSLPFNIPVEIEAIVEVEE 153          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1027.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXY4_9PHAE3.140e-1064.10YjgF_endoribonc domain-containing protein n=2 Tax=... [more]
A0A4D9CNR0_9STRA7.230e-1071.05YjgF_endoribonc domain-containing protein n=2 Tax=... [more]
A0A4D9CNR9_9STRA1.180e-971.05YjgF_endoribonc domain-containing protein n=1 Tax=... [more]
W7TB75_9STRA2.160e-971.05Endoribonuclease l-psp n=2 Tax=Nannochloropsis gad... [more]
A0A2R5GI79_9STRA3.220e-965.79Protein TCP17 n=1 Tax=Hondaea fermentalgiana TaxID... [more]
A0A485KSR4_9STRA5.390e-969.44Aste57867_10922 protein n=1 Tax=Aphanomyces stella... [more]
A0A0M0J7D8_9EUKA6.180e-963.16Endoribonuclease l-psp n=1 Tax=Chrysochromulina to... [more]
A0A812PJA3_9DINO7.050e-961.54TCP17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A067CYL7_SAPPC9.840e-971.43YjgF_endoribonc domain-containing protein n=4 Tax=... [more]
A0A2H5YEN0_9BACT2.180e-871.05YjgF_endoribonc domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 1..37
e-value: 4.1E-11
score: 44.6
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 2..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1027contigH-akashiwo_Contig1027:319668..332822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1027.7.1mRNA_H-akashiwo_Contig1027.7.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1027 319668..332907 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1027.7.1 ID=prot_H-akashiwo_Contig1027.7.1|Name=mRNA_H-akashiwo_Contig1027.7.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=41bp
MFGTCFGEKGIHSRAAVGTNSLPLRIPVEIEAIVEVEEGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035959RutC-like_sf