mRNA_H-akashiwo_Contig1024.6.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1024.6.1
Unique NamemRNA_H-akashiwo_Contig1024.6.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: A0A7S3USQ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USQ4_HETAK)

HSP 1 Score: 189 bits (480), Expect = 2.000e-55
Identity = 95/102 (93.14%), Postives = 96/102 (94.12%), Query Frame = 3
Query:  549 ALRGAGKACVPGGRFMCLEFSQVEAPVARQLYDLYSFRVIPPMGAALAGDAASYQYLVESIRVFPDKERLKGMMQEAGFQYAGYQSYTLGAVALHSGMKPLH 854
            AL  A +   PGGRFMCLEFSQVEAPVARQLYDLYSFRVIPPMGAALAGDAASYQYLVESIRVFPDKERLKGMMQEAGFQYAGYQSYTLGAVALHSGMKPLH
Sbjct:   30 ALAEARRVLRPGGRFMCLEFSQVEAPVARQLYDLYSFRVIPPMGAALAGDAASYQYLVESIRVFPDKERLKGMMQEAGFQYAGYQSYTLGAVALHSGMKPLH 131          
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: I2CPT1_NANGC (Ubiquinone biosynthesis methyltransferase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPT1_NANGC)

HSP 1 Score: 162 bits (410), Expect = 1.220e-43
Identity = 100/194 (51.55%), Postives = 125/194 (64.43%), Query Frame = 1
Query:    1 FGFEKVEYGEKKERVREVFTNVASKYDLMNDAMSAGIHRLWKDDFVENIGLSAL--AAAGGDSPKVLDVAGGTGDIAFRILEQLQQCWPDAAGAAPPGHPAGGRLAAAXXXXXXXXXXXXXVTVFDINADMMEVGRARAGAR-FPPAAAAR--LAWVQGDAERLPFAEGTFDLYTVAFGLRNVTDKARRYEALA 567
            FGF+KV  G+K++ V+ VF +VA KYD+MND MS G+HRLWKDDFV + GL A+  A  GG   ++LDVAGGTGDIAFR+++               G  AG RL A              +TVFDINA+M++VGRARA    FP  A  R  + WV+G+AE LPF + TFDLYT+AFGLRNVT   RR +ALA
Sbjct:   14 FGFQKVPVGDKEKLVKTVFDSVAGKYDVMNDLMSGGLHRLWKDDFVSSAGLPAVLRAQGGGKDIRLLDVAGGTGDIAFRLMKTAL------------GVDAGARLPA--------------ITVFDINAEMLKVGRARAEEEVFPTQAPVRACMEWVEGNAEALPFPDDTFDLYTIAFGLRNVT---RRAQALA 178          
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: A0A6H5K315_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K315_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 2.190e-41
Identity = 92/185 (49.73%), Postives = 117/185 (63.24%), Query Frame = 1
Query:    1 FGFEKVEYGEKKERVREVFTNVASKYDLMNDAMSAGIHRLWKDDFVENIGLSALAAAGGDSPKVLDVAGGTGDIAFRILEQLQQCWPDAAGAAPPGHPAG-----GRLAAAXXXXXXXXXXXXXVTVFDINADMMEVGRARAGARFPPAAAARLAWVQGDAERLPFAEGTFDLYTVAFGLRNVTD 540
            FGF++V   +KK  V+ VFT+VA  YD+MND MSAG+HR+WKD+FV+ + +S    AG  +PKVLDVAGGTGDIAFR+ +QL+   P  AG +P G   G     G +                +TV DIN DM+EVG  RA  RF P     + +VQ DAE LPF + +F LYT+AFGLRNVTD
Sbjct:   52 FGFQQVPSEQKKGMVKGVFTSVAHNYDVMNDLMSAGMHRIWKDEFVDMLRISPGFEAGSPAPKVLDVAGGTGDIAFRVADQLR---PYMAG-SPAGDATGEGEEQGGVQQDGAAGNAIDSNVPLLTVSDINPDMLEVGEQRAADRFSPEILTNMQFVQADAEALPFEDNSFHLYTIAFGLRNVTD 232          
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: D8LNM1_ECTSI (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM1_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 8.030e-41
Identity = 92/187 (49.20%), Postives = 117/187 (62.57%), Query Frame = 1
Query:    1 FGFEKVEYGEKKERVREVFTNVASKYDLMNDAMSAGIHRLWKDDFVENIGLSALAAAGGDSPKVLDVAGGTGDIAFRILEQLQQCWPDAAGAAPPGHPAG-------GRLAAAXXXXXXXXXXXXXVTVFDINADMMEVGRARAGARFPPAAAARLAWVQGDAERLPFAEGTFDLYTVAFGLRNVTD 540
            FGF++V   +KK  V+ VFT+VA  YD+MND MSAG+HR+WKD+FV+ + +S    AG  +PKVLDVAGGTGDIAFR+ +QL+   P  AG +P G   G       G +                +TV DIN DM+EVG  RA  RF P     + +VQ DAE LPF + +F LYT+AFGLRNVTD
Sbjct:   52 FGFQQVPSEKKKGMVKSVFTSVAHNYDVMNDLMSAGMHRIWKDEFVDMLRISPGFEAGSPAPKVLDVAGGTGDIAFRVADQLR---PYMAG-SPAGKGTGEGERGGEGEVRQDGAAADAMDSNVPLLTVSDINPDMLEVGEQRAADRFSPEILTNMQFVQADAEALPFEDNSFHLYTIAFGLRNVTD 234          
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: A0A7R9UVH4_DIALT (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UVH4_DIALT)

HSP 1 Score: 156 bits (394), Expect = 1.530e-40
Identity = 92/183 (50.27%), Postives = 110/183 (60.11%), Query Frame = 1
Query:    1 FGFEKVEYGEKKERVREVFTNVASKYDLMNDAMSAGIHRLWKDDFVENIGLSALAAAGGDSPKVLDVAGGTGDIAFRILEQLQQCWPDAAGAAPPGHPAGGRLAAAXXXXXXXXXXXXXVTVFDINADMMEVGRARAGARFP---PAAAARLAWVQGDAERLPFAEGTFDLYTVAFGLRNVTD 540
            FG+  V   +K + V EVF+ VA  YDLMND MSAG+HR+WKD FV+ +GL A+ AA     +VLDVAGGTGDI FRI + L    P A   A                          VTVFDINADM+ VG  RAGAR     P A A L WVQGDAE LPF + +FD+Y++AFG+RNVTD
Sbjct:   43 FGYRDVPQADKAKMVGEVFSRVADSYDLMNDVMSAGVHRVWKDHFVDGMGLPAINAASSTGVRVLDVAGGTGDITFRIADALAADGPSARARA-------------------------EVTVFDINADMLRVGEQRAGARAQLQRPGAPA-LRWVQGDAETLPFDDSSFDVYSIAFGIRNVTD 199          
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: A0A4D9CWY2_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWY2_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.970e-40
Identity = 97/194 (50.00%), Postives = 124/194 (63.92%), Query Frame = 1
Query:    1 FGFEKVEYGEKKERVREVFTNVASKYDLMNDAMSAGIHRLWKDDFVENIGLSAL--AAAGGDSPKVLDVAGGTGDIAFRILEQLQQCWPDAAGAAPPGHPAGGRLAAAXXXXXXXXXXXXXVTVFDINADMMEVGRARAGAR-FPPAAAAR--LAWVQGDAERLPFAEGTFDLYTVAFGLRNVTDKARRYEALA 567
            FGF++V   +K++ V+ VF +VA KYD+MND MS G+HRLWKDDFV + GL A+  A  GG   ++LDVAGGTGDIAFR+++               G  AG RL A              +TVFDINA+M++VG+ARA    FP  A  R  + WV+G+AE LPF + TFDLYT+AFGLRNVT   RR +ALA
Sbjct:   81 FGFQQVPVEDKEKLVKTVFDSVAGKYDVMNDLMSGGLHRLWKDDFVSSAGLPAVLRAQGGGKDIRLLDVAGGTGDIAFRLMKTAL------------GVDAGARLPA--------------ITVFDINAEMLKVGQARAEEEVFPTQAPVRACMEWVEGNAEALPFPDNTFDLYTIAFGLRNVT---RRAQALA 245          
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: A0A835Z8S3_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.820e-36
Identity = 83/183 (45.36%), Postives = 107/183 (58.47%), Query Frame = 1
Query:    1 FGFEKVEYGEKKERVREVFTNVASKYDLMNDAMSAGIHRLWKDDFVENIGLSALAAAGGDSPKVLDVAGGTGDIAFRILEQLQQCWPDAAGAAPPGHPAGGRLAAAXXXXXXXXXXXXXVTVFDINADMMEVGRARAGARFPPAAAARLAWVQGDAERLPFAEGTFDLYTVAFGLRNVTDKAR 549
            FG+++V   +KK  V+ VF++VA  YD+MND MSAG+HRLWKD+FV  +G+     AG   P+VLD+AGGTGDI+FRI+E++        G  P                         VTV DIN  M+EVG  RA  RF   A + L +   DAE LPF +G +D YT+AFGLRNVTD  R
Sbjct:   47 FGYKQVPESDKKGMVKGVFSSVAKDYDVMNDLMSAGVHRLWKDEFVRMLGVKEALQAGDSPPRVLDMAGGTGDISFRIIEEMSPYLRQDQGDEP------------------------IVTVSDINPKMLEVGEERAAKRFSGRALSALEFRVADAEALPFEDGAYDAYTIAFGLRNVTDVPR 205          
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: J9FJ00_WUCBA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=7 Tax=Onchocercidae TaxID=6296 RepID=J9FJ00_WUCBA)

HSP 1 Score: 143 bits (360), Expect = 7.740e-36
Identity = 85/180 (47.22%), Postives = 108/180 (60.00%), Query Frame = 1
Query:    1 FGFEKVEYGEKKERVREVFTNVASKYDLMNDAMSAGIHRLWKDDFVENIGLSALAAAGGDSPKVLDVAGGTGDIAFRILEQLQQCWPDAAGAAPPGHPAGGRLAAAXXXXXXXXXXXXXVTVFDINADMMEVGRARAGARFPPAAAARLAWVQGDAERLPFAEGTFDLYTVAFGLRNVTD 540
            FGF++V+  EK ++V  VF +VA+KYDLMNDAMS GIHRLWKD FV N+GL+A  A       ++DVAGGTGDIAFR +  +Q                                    VTV DIN +M++VG+ RA A  P    ARL WV+GDAE LPF E +FD+YT+AFG+RN T+
Sbjct:   35 FGFQEVDEKEKSKKVHAVFASVANKYDLMNDAMSLGIHRLWKDHFVANLGLTANTA-------MIDVAGGTGDIAFRAVRDIQS-----------------------------KKGKGSVTVCDINENMLKVGQQRAIAD-PSVLKARLKWVRGDAEALPFDENSFDVYTIAFGIRNCTN 177          
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: F0YAB6_AURAN (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAB6_AURAN)

HSP 1 Score: 142 bits (358), Expect = 1.200e-35
Identity = 82/180 (45.56%), Postives = 110/180 (61.11%), Query Frame = 1
Query:    1 FGFEKVEYGEKKERVREVFTNVASKYDLMNDAMSAGIHRLWKDDFVENIGLSALAAAGGDSPKVLDVAGGTGDIAFRILEQLQQCWPDAAGAAPPGHPAGGRLAAAXXXXXXXXXXXXXVTVFDINADMMEVGRARAGARFPPAAAARLAWVQGDAERLPFAEGTFDLYTVAFGLRNVTD 540
            FG + V    K+  VR VF++VAS YD+MND MS G+HR WKDDFV  +GL A+A A G++P+ LDVAGGTGD+AFR+ E+L    P  AG APP                        + V D N++M+ VGR RA  R    A A + + +G+A+ LP+A+ +FD  T++FGLRNVTD
Sbjct:   17 FGEKTVPKEAKEGLVRGVFSSVASNYDVMNDFMSGGLHRFWKDDFVGRLGLGAVARASGEAPRCLDVAGGTGDVAFRVAEELSAWLPPLAGGAPP-----------------------PLVVSDPNSEMLAVGRQRAAER--GIAEACMVFEEGNAQSLPYADDSFDFVTISFGLRNVTD 171          
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Match: A0A0R3RFE7_9BILA (Uncharacterized protein n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3RFE7_9BILA)

HSP 1 Score: 138 bits (348), Expect = 2.790e-35
Identity = 82/180 (45.56%), Postives = 104/180 (57.78%), Query Frame = 1
Query:    1 FGFEKVEYGEKKERVREVFTNVASKYDLMNDAMSAGIHRLWKDDFVENIGLSALAAAGGDSPKVLDVAGGTGDIAFRILEQLQQCWPDAAGAAPPGHPAGGRLAAAXXXXXXXXXXXXXVTVFDINADMMEVGRARAGARFPPAAAARLAWVQGDAERLPFAEGTFDLYTVAFGLRNVTD 540
            FGF++++  EK  +V  VF +VA+KYDLMNDAMS GIHRLWKD FV ++GL A       +  V+DVAGGTGDIAFR + ++Q                                    VTV DIN +M+ VG+ RA    P    ARL WV GDAE LPF E +FD+YT+AFG+RN T+
Sbjct:   35 FGFQEIDEKEKSRKVHAVFASVANKYDLMNDAMSVGIHRLWKDHFVRSLGLMA-------NTSVVDVAGGTGDIAFRAVREIQS-----------------------------KKGTGSVTVCDINENMLRVGQQRA-IDDPSVLKARLKWVCGDAEALPFGENSFDVYTIAFGIRNCTN 177          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1024.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3USQ4_HETAK2.000e-5593.14Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
I2CPT1_NANGC1.220e-4351.55Ubiquinone biosynthesis methyltransferase (Fragmen... [more]
A0A6H5K315_9PHAE2.190e-4149.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNM1_ECTSI8.030e-4149.202-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
A0A7R9UVH4_DIALT1.530e-4050.272-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
A0A4D9CWY2_9STRA2.970e-4050.002-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
A0A835Z8S3_9STRA1.820e-3645.362-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
J9FJ00_WUCBA7.740e-3647.222-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
F0YAB6_AURAN1.200e-3545.562-methoxy-6-polyprenyl-1,4-benzoquinol methylase, ... [more]
A0A0R3RFE7_9BILA2.790e-3545.56Uncharacterized protein n=1 Tax=Elaeophora elaphi ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1024contigH-akashiwo_Contig1024:371056..372391 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LNM1
Preferred nameCOQ5
PFAMsUbie_methyltran
Model size1336
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC01253
KEGG koko:K06127
KEGG ReactionR04983,R08774
KEGG Pathwayko00130,ko01100,ko01110,map00130,map01100,map01110
KEGG ModuleM00128
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.99e-35
EggNOG OGsCOG2226@1|root,KOG1540@2759|Eukaryota
EC2.1.1.201
Description2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
Cds size582
COG categoryH
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387055.0214157-UTR-H-akashiwo_Contig1024:371055..3711391681387055.0214157-UTR-H-akashiwo_Contig1024:371055..371139Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1024 371056..371139 +
1681387055.0398977-UTR-H-akashiwo_Contig1024:371721..3723911681387055.0398977-UTR-H-akashiwo_Contig1024:371721..372391Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1024 371722..372391 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387055.0322514-CDS-H-akashiwo_Contig1024:371139..3717211681387055.0322514-CDS-H-akashiwo_Contig1024:371139..371721Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1024 371140..371721 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1024.6.1prot_H-akashiwo_Contig1024.6.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1024 371140..371721 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1024.6.1

>prot_H-akashiwo_Contig1024.6.1 ID=prot_H-akashiwo_Contig1024.6.1|Name=mRNA_H-akashiwo_Contig1024.6.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=194bp
MNDAMSAGIHRLWKDDFVENIGLSALAAAGGDSPKVLDVAGGTGDIAFRI
LEQLQQCWPDAAGAAPPGHPAGGRLAAAADADESAAAAAAAVTVFDINAD
MMEVGRARAGARFPPAAAARLAWVQGDAERLPFAEGTFDLYTVAFGLRNV
TDKARRYEALARHACPAAGSCAWSSRRWRRRSPGSCTTSTLSG*
back to top

mRNA from alignment at H-akashiwo_Contig1024:371056..372391+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1024.6.1 ID=mRNA_H-akashiwo_Contig1024.6.1|Name=mRNA_H-akashiwo_Contig1024.6.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1336bp|location=Sequence derived from alignment at H-akashiwo_Contig1024:371056..372391+ (Heterosigma akashiwo CCMP452)
TTCGGCTTTGAAAAGGTTGAATATGGGGAGAAAAAGGAAAGAGTGCGAGA GGTTTTCACAAATGTTGCCTCGAAGTACGACCTCATGAATGATGCAATGA GCGCTGGGATCCACCGACTTTGGAAAGATGACTTCGTCGAGAACATTGGC CTGTCGGCGCTCGCTGCAGCTGGCGGCGACAGCCCCAAGGTTCTTGATGT AGCCGGGGGGACCGGGGACATCGCCTTCAGAATCCTCGAGCAGCTGCAGC AGTGCTGGCCGGACGCTGCgGGTGCCGCCCCTCCCgGCCACCCCGCTGGC GGGCGGCTCGCCGCCGCCGCGGATGCGGATGAGTCTGCCGCCGCGGCCGC CGCCGCGGTGACGGTCTTCGACATCAACGCGGACATGATGGAGGTCGGGC GCGCCCGGGCGGGCGCGCGGTTCCCGCCGGCGGCCGCCGCCCGGCTCGCG TGGGTCCAGGGCGACGCGGAGCGGCTCCCCTTCGCCGAGGGCACCTTCGA CCTGTACACGGTCGCGTTCGGCCTGCGCAACGTGACGGACAAGGCCCGGC GCTACGAGGCGCTGGCAAGGCATGCGTGCCCGGCGGCCGGTTCATGTGCC TGGAGTTCTCGCAGGTGGAGGCGCCGGTCGCCCGGCAGCTGTACGACCTC TACTCTTTCCGGGTGATCCCGCCCATGGGCGCGGCGCTGGCGGGGGACGC CGCCTCCTACCAGTACCTGGTGGAGAGCATCCGGGTCTTCCCGGACAAGG AGCGGCTCAAGGGGATGATGCAGGAGGCCGGGTTCCAGTACGCAGGGTAC CAGAGCTACACCCTGGGGGCGGTGGCGCTGCACTCAGGGATGAAGCCCCT GCACTGATGCCTTTCCCCCTCCACCCCCCTGCCCCCGGGCTGCTGCATGG CGAAGAGATGGTGTTCCACAGCGAGGAGGGCCTTGAGCTGGGGCCCTGGT TGCTGCTGTGTGCCAGGGGCAGGAAGGGCGTGGCAATACCTGAAGACATG CTGACCAAGCTGGCCTGCACACGCCACATTCCAGGTTGAAAAGAGAAAGA TGGCTCGCATGCTGATGATCACGTTTGAACTCTGAGTGTTGGAGCTACAA CTGTGGCTGTGCCCGTACCCCAACAAAATCAATGGGTGCATATACTTCAG CAATTCATCTTCTAAGAAGAAGTATGGCAGACATAACGAACACAACGATG TTTTTTTTTCTTGAGATGAAGTTGAAAATTTCTTTTGACCAGTGGTGTTT TTCACAATGTTCTACACTGTATATAAATGCTCTGCCTCGGAATTGAGGGC CTGTTCCACATTTTATGGCTGTCCTAATATCCCCTC
back to top

Coding sequence (CDS) from alignment at H-akashiwo_Contig1024:371056..372391+

>mRNA_H-akashiwo_Contig1024.6.1 ID=mRNA_H-akashiwo_Contig1024.6.1|Name=mRNA_H-akashiwo_Contig1024.6.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=582bp|location=Sequence derived from alignment at H-akashiwo_Contig1024:371056..372391+ (Heterosigma akashiwo CCMP452)
ATGAATGATGCAATGAGCGCTGGGATCCACCGACTTTGGAAAGATGACTT
CGTCGAGAACATTGGCCTGTCGGCGCTCGCTGCAGCTGGCGGCGACAGCC
CCAAGGTTCTTGATGTAGCCGGGGGGACCGGGGACATCGCCTTCAGAATC
CTCGAGCAGCTGCAGCAGTGCTGGCCGGACGCTGCgGGTGCCGCCCCTCC
CgGCCACCCCGCTGGCGGGCGGCTCGCCGCCGCCGCGGATGCGGATGAGT
CTGCCGCCGCGGCCGCCGCCGCGGTGACGGTCTTCGACATCAACGCGGAC
ATGATGGAGGTCGGGCGCGCCCGGGCGGGCGCGCGGTTCCCGCCGGCGGC
CGCCGCCCGGCTCGCGTGGGTCCAGGGCGACGCGGAGCGGCTCCCCTTCG
CCGAGGGCACCTTCGACCTGTACACGGTCGCGTTCGGCCTGCGCAACGTG
ACGGACAAGGCCCGGCGCTACGAGGCGCTGGCAAGGCATGCGTGCCCGGC
GGCCGGTTCATGTGCCTGGAGTTCTCGCAGGTGGAGGCGCCGGTCGCCCG
GCAGCTGTACGACCTCTACTCTTTCCGGGTGA
back to top