mRNA_H-akashiwo_Contig1024.4.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1024.4.1
Unique NamemRNA_H-akashiwo_Contig1024.4.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: A0A7S4DD55_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD55_HETAK)

HSP 1 Score: 540 bits (1392), Expect = 7.010e-192
Identity = 270/299 (90.30%), Postives = 276/299 (92.31%), Query Frame = 1
Query:    1 LLLRRMHRSNNYWFLSFSVMLSSICGCLGFVLPNNNELDQDLPRFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQKAGPALLEAHWAGGTPSLGEGLQRAGRCAAGRCPRLCCRKPGAAGVG 897
            +LLRRMHRSNNYWFLSFSVMLSSICGCLGFVLPNNNELDQDLPRFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQKAGPALLEAH AG    + EGL       +     +C R+P    +G
Sbjct:    7 ILLRRMHRSNNYWFLSFSVMLSSICGCLGFVLPNNNELDQDLPRFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQKAGPALLEAHRAGVDVIVKEGLANGRALRSLTLAAVCAREPALRELG 305          
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: A0A7S2A7I3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7I3_TRICV)

HSP 1 Score: 291 bits (746), Expect = 4.930e-93
Identity = 146/238 (61.34%), Postives = 178/238 (74.79%), Query Frame = 1
Query:  124 LPRFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAV-----ETADGARLFDSVQCTFNLLEQKAGPALLEAHWAGGTPSLGEGL 822
            LPR GLG AALGRPGYINLDR  T G+ +VR VE M+    ++M+ V  ++  G +  WFDCARSYG SE+FVG+FLR +G+ P  V+VSSKWGY YVADW V L +G+PHEVKDHS+  FLKQVEET   LGEYV LYQ+HSATFESG+LT++ V +ALA+CRRERGW IGLSVSGPNQD ++R A+ +     E  +  RLFDSVQCT+N+LEQ+ G AL EA  AG    + EGL
Sbjct:   31 LPRMGLGMAALGRPGYINLDRTSTFGSKDVRDVEAMQTRANAVMEAV--MDAKGPVRPWFDCARSYGLSEKFVGEFLRGQGVAPDAVHVSSKWGYTYVADWRVELGEGDPHEVKDHSVENFLKQVEETAEHLGEYVDLYQVHSATFESGILTDSRVHEALAKCRRERGWSIGLSVSGPNQDQILREAMKITVRGGEGEEAVRLFDSVQCTYNVLEQRPGEALEEARAAGMDIIIKEGL 266          
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: B8C0C3_THAPS (Aldo_ket_red domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0C3_THAPS)

HSP 1 Score: 281 bits (719), Expect = 2.380e-89
Identity = 139/235 (59.15%), Postives = 168/235 (71.49%), Query Frame = 1
Query:  118 QDLPRFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQKAGPALLEAHWAGGTPSLGEGL 822
              LP  GLG AALGRPGYINL RD   G S+ R +E M+   + ++D +F     G +P W DCARSYG SE+FVGD+L++  IKP +VY SSKWGY YVADWNV+L  G PHEVKDHS+  FLKQVEET   +G YV LYQIHSATFESGV+ +AD+  AL +CR   GW+IGLSVS P QD V+R A+ +E  DG +LFDSVQCT+N+ EQ+  PALL AH AG    + EGL
Sbjct:    7 SQLPNLGLGMAALGRPGYINLGRDAIFGNSSSRPIEAMQSQADLVLDSLFANTSKGSVP-WVDCARSYGLSEQFVGDYLKRNNIKPNEVYCSSKWGYTYVADWNVSLERGAPHEVKDHSVSNFLKQVEETKHFIGHYVDLYQIHSATFESGVMDDADIHKALHQCRENLGWKIGLSVSSPKQDEVMRRAMEIEV-DGHKLFDSVQCTYNVFEQRPAPALLAAHKAGMDIIIKEGL 239          
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: A0A7S2UHQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UHQ1_9STRA)

HSP 1 Score: 277 bits (708), Expect = 4.080e-89
Identity = 129/212 (60.85%), Postives = 166/212 (78.30%), Query Frame = 1
Query:  124 LPRFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQK 759
            LPR GLG AALGRPGYINLDR   +GTS+ R+++ M+     +M+ + + + +  MP WFDCARSYG SE+FVG+FLR + + PKDVY+SSKWGY YVA+W V L  G+ HEVKDHS+  FLKQ++ET   LGEY+ LYQ+HSATF+SG+LTN  V +AL  C++ERGW IGLSVSGP+QD +IR A+ ++  DG+RLFDSVQCTFN+LEQ+
Sbjct:   20 LPRIGLGMAALGRPGYINLDRTAILGTSDERNIDEMQVRANGVMERLMD-SSSSRMP-WFDCARSYGLSEKFVGEFLRSKKVDPKDVYLSSKWGYTYVANWQVELEQGKQHEVKDHSVENFLKQIKETNEELGEYIDLYQVHSATFDSGILTNTTVHNALNECKKERGWSIGLSVSGPSQDEIIREAMKIKAGDGSRLFDSVQCTFNMLEQR 229          
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: A0A7S2ENU4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ENU4_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.900e-86
Identity = 136/240 (56.67%), Postives = 167/240 (69.58%), Query Frame = 1
Query:  103 NNELDQDLPRFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQKAGPALLEAHWAGGTPSLGEGL 822
            ++     LPR GLG AALGRPGYINLDR    G  + R V  M+    ++MD +F  + +     W DCARSYG SE+FVG++LR   I P DVYVSSKWGY YVADW V L  G PHEVKDHS+  FLKQV+ET A +GEYV LYQ+HSATFESG+L++A V +AL  CR+E GW+IGLSVS  +QD +IR A+ +   DG +LFDSVQCT+N+LEQK   AL+EA  A     + EGL
Sbjct:   25 SSSTTSSLPRIGLGMAALGRPGYINLDRTTIFGDKDSRDVNVMQTRANTVMDSLFSSSTSKSTMPWLDCARSYGLSEQFVGEYLRSNDIAPSDVYVSSKWGYTYVADWKVELNAGAPHEVKDHSVENFLKQVKETSAHIGEYVNLYQVHSATFESGILSDARVHEALHTCRKENGWKIGLSVSSTSQDELIREAMKITVEDGDKLFDSVQCTYNILEQKPYNALVEAKEANMDIIIKEGL 264          
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: A0A448ZE44_9STRA (Aldo_ket_red domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZE44_9STRA)

HSP 1 Score: 273 bits (698), Expect = 3.480e-86
Identity = 135/237 (56.96%), Postives = 174/237 (73.42%), Query Frame = 1
Query:  112 LDQDLPRFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQKAGPALLEAHWAGGTPSLGEGL 822
            L + LPR GLG AALGRPGYINLDRD   G S+ RS+E M+     ++D +FE +++ +   W DCARSYG SE+FVG++LRK+ I+P D YVSSKWGY YVA+W V L  G+PHEVKDHS+  FLKQ +E++  LG+Y+ LYQIHSATFESGVL N DV  AL + ++E G  IGLSVS P QD VI+ A+ + + DG +LFDSVQCT+N+LEQ+  P L++AH AG    + EG+
Sbjct:    4 LMKPLPRLGLGMAALGRPGYINLDRDSVFGASDSRSIEDMQNQANIVLDCMFEQSRSKQNQPWVDCARSYGLSEKFVGEYLRKKNIQPGDXYVSSKWGYSYVANWKVKLEAGKPHEVKDHSVENFLKQFDESMNILGDYMNLYQIHSATFESGVLENEDVHKALNKAKQENGIXIGLSVSSPKQDEVIQKAMDI-SVDGEKLFDSVQCTYNVLEQRPAPCLMKAHEAGMDIIIKEGM 239          
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: K0S4H7_THAOC (Aldo_ket_red domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4H7_THAOC)

HSP 1 Score: 271 bits (693), Expect = 1.910e-85
Identity = 140/237 (59.07%), Postives = 173/237 (73.00%), Query Frame = 1
Query:  130 RFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVF----ELNKNGEMPL-WFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADG-ARLFDSVQCTFNLLEQKAGPALLEAHWAGGTPSLGEGL 822
            R GLG AALGRPGYINL RD  + +   R+VE M+    ++MD +F      + +GE  + W DCARSYG SE+FVG++LR R + P +VYVSSKWGY YVADWNV L DGEPHEVKDHS+  FLKQVEET   +G Y++LYQ+HSAT ESG+LTN  V +AL +CR+E GW++GLSVSG NQD +IR A+A+   +   RLFDSVQCT+N+LEQK G ALLEA  AG    + EGL
Sbjct:    2 RIGLGMAALGRPGYINLSRDTHLPS---RTVEGMQSQANAVMDELFGRAAAASGDGEKNVPWLDCARSYGLSEKFVGEYLRSRNVSPDEVYVSSKWGYTYVADWNVELDDGEPHEVKDHSLPNFLKQVEETRELVGSYLKLYQVHSATMESGILTNTGVHEALHKCRQEHGWKLGLSVSGTNQDDIIRKAMAITVGEPPVRLFDSVQCTYNVLEQKPGTALLEAREAGMDVIIKEGL 235          
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: A0A1Z5J5V6_FISSO (Aldo_ket_red domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J5V6_FISSO)

HSP 1 Score: 264 bits (675), Expect = 1.560e-82
Identity = 141/249 (56.63%), Postives = 172/249 (69.08%), Query Frame = 1
Query:  124 LPRFGLGTAALGRPGYINLDRDETVGTSNV-RSVEYMRELTESMMDYVFEL---------------NKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQKAGPALLEAHWAGGTPSLGEGL 822
            LPR GLG AALGRPGYINLDR  T G+ +  R+V+ M+  +  ++D +F+L               N    +P W DCARSYG SE+FVG++LR R I  KDVYVSSKWGY YVA++ V L +  PHE+KDHS+  FLKQV+ET + LGEY+ LYQIHSATFESGVL N  V  AL +CRR+RGW+IGLSVS P QD +IRAA+ +   D   LFDSVQCT+NLLEQ+ G AL EAH  G    + EGL
Sbjct:    7 LPRIGLGMAALGRPGYINLDRYITFGSDHSQRTVDRMQTQSNLVLDRLFQLCSTLHQSNDVDISSGNNYSSLP-WIDCARSYGLSEQFVGEYLRSRHISSKDVYVSSKWGYAYVANFAVTLPEAAPHEIKDHSVEQFLKQVKETDSFLGEYINLYQIHSATFESGVLENVQVHHALDQCRRDRGWKIGLSVSSPQQDQIIRAAMKIRV-DDRPLFDSVQCTYNLLEQRPGSALQEAHNMGMDIIIKEGL 253          
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: A0A7S1Y6X1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y6X1_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.060e-81
Identity = 133/239 (55.65%), Postives = 171/239 (71.55%), Query Frame = 1
Query:  127 PRFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKN-----GEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGAR--LFDSVQCTFNLLEQKAGPALLEAHWAGGTPSLGEGL 822
            PR GLG AALGRPGYI LDR  T+G+  VR+++ M+     +MD +F+L+       G    W DCARSYG SE+FVG++LR   I P DV+VSSKWGY YVADWN+ L +G+PHEVKDHS   FLKQVEET   +GE+V LYQ+HSATFESG+LT+  V  AL++C+ ERGW +GLSVSGPNQ  +++ A+ +++   +   LFDSVQCT+N+LEQ AG AL  AH +G    + EGL
Sbjct:   12 PRLGLGMAALGRPGYITLDRASTLGS--VRTIDDMQSKANQVMDQLFQLSTTSTTTTGANRPWLDCARSYGLSEKFVGEYLRDNKIAPSDVFVSSKWGYTYVADWNIELGEGDPHEVKDHSADNFLKQVEETNEFIGEFVDLYQVHSATFESGILTDERVHAALSKCKDERGWMLGLSVSGPNQGDILKEAMKLKSTTESEKPLFDSVQCTYNILEQGAGEALQVAHDSGMDIIIKEGL 248          
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Match: A0A1E7F2K8_9STRA (Aldo/keto reductase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F2K8_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.540e-80
Identity = 130/231 (56.28%), Postives = 168/231 (72.73%), Query Frame = 1
Query:  130 RFGLGTAALGRPGYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCARSYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVKDHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCRRERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQKAGPALLEAHWAGGTPSLGEGL 822
            R GLG AALGRPGYINL R    G S+ RS++ M+     ++D +F+ N   E+P W DCARSYG SE FVG++L+++ I+P DV +SSKWGY YVADW V L  G+PHEVKDHS+  FLKQ EET++  G+Y+ LYQIHSATFESGVL N +V  AL +CR++ G  +GLSVS P Q+ VI+ A+++E  DG +LFDSVQCTFN+LEQ+    LL+AH AG    + EG+
Sbjct:    2 RLGLGMAALGRPGYINLGRGSVFGGSDSRSLDIMQNQANIVLDSLFQQN---EIP-WIDCARSYGLSERFVGEYLKEKNIQPDDVIISSKWGYTYVADWKVKLEGGKPHEVKDHSVENFLKQFEETMSIFGDYLNLYQIHSATFESGVLDNDEVHKALHQCRKDHGISVGLSVSSPKQNEVIQKAMSIEV-DGIKLFDSVQCTFNVLEQRPKSILLKAHEAGIDIIIKEGM 227          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1024.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD55_HETAK7.010e-19290.30Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2A7I3_TRICV4.930e-9361.34Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B8C0C3_THAPS2.380e-8959.15Aldo_ket_red domain-containing protein n=1 Tax=Tha... [more]
A0A7S2UHQ1_9STRA4.080e-8960.85Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2ENU4_9STRA1.900e-8656.67Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448ZE44_9STRA3.480e-8656.96Aldo_ket_red domain-containing protein n=1 Tax=Pse... [more]
K0S4H7_THAOC1.910e-8559.07Aldo_ket_red domain-containing protein n=1 Tax=Tha... [more]
A0A1Z5J5V6_FISSO1.560e-8256.63Aldo_ket_red domain-containing protein n=2 Tax=Fis... [more]
A0A7S1Y6X1_9STRA1.060e-8155.65Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1E7F2K8_9STRA3.540e-8056.28Aldo/keto reductase n=1 Tax=Fragilariopsis cylindr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1024contigH-akashiwo_Contig1024:237640..238947 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog35128.Thaps4804
PFAMsAldo_ket_red
Model size1127
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categorysignal peptide
Exons2
Evalue4.78e-91
EggNOG OGsCOG0667@1|root,2RNJG@2759|Eukaryota,2XE29@2836|Bacillariophyta
DescriptionAldo/keto reductase family
Cds size942
COG categoryC
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387054.9061174-UTR-H-akashiwo_Contig1024:237639..2376541681387054.9061174-UTR-H-akashiwo_Contig1024:237639..237654Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1024 237640..237654 +
1681387054.9344785-UTR-H-akashiwo_Contig1024:238777..2389471681387054.9344785-UTR-H-akashiwo_Contig1024:238777..238947Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1024 238778..238947 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387054.9154823-CDS-H-akashiwo_Contig1024:237654..2381191681387054.9154823-CDS-H-akashiwo_Contig1024:237654..238119Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1024 237655..238119 +
1681387054.9235275-CDS-H-akashiwo_Contig1024:238300..2387771681387054.9235275-CDS-H-akashiwo_Contig1024:238300..238777Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1024 238301..238777 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1024.4.1prot_H-akashiwo_Contig1024.4.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1024 237655..238777 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1024.4.1

>prot_H-akashiwo_Contig1024.4.1 ID=prot_H-akashiwo_Contig1024.4.1|Name=mRNA_H-akashiwo_Contig1024.4.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=314bp
MHRSNNYWFLSFSVMLSSICGCLGFVLPNNNELDQDLPRFGLGTAALGRP
GYINLDRDETVGTSNVRSVEYMRELTESMMDYVFELNKNGEMPLWFDCAR
SYGKSEEFVGDFLRKRGIKPKDVYVSSKWGYEYVADWNVALADGEPHEVK
DHSIGMFLKQVEETVARLGEYVRLYQIHSATFESGVLTNADVLDALARCR
RERGWRIGLSVSGPNQDAVIRAALAVETADGARLFDSVQCTFNLLEQKAG
PALLEAHWAGGTPSLGEGLQRAGRCAAGRCPRLCCRKPGAAGVGRRPTLR
WATCWRSPSARGC*
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mRNA from alignment at H-akashiwo_Contig1024:237640..238947+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1024.4.1 ID=mRNA_H-akashiwo_Contig1024.4.1|Name=mRNA_H-akashiwo_Contig1024.4.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1308bp|location=Sequence derived from alignment at H-akashiwo_Contig1024:237640..238947+ (Heterosigma akashiwo CCMP452)
CTGCTGCTGCGAAGAATGCATCGTAGCAACAACTACTGGTTTCTTTCATT CTCGGTTATGCTTTCATCGATTTGTGGTTGTTTGGGATTCGTGCTCCCCA ATAACAATGAGCTGGACCAAGACTTGCCACGTTTCGGTCTGGGTACGGCA GCACTCGGCCGTCCGGGTTATATCAACTTGGATCGGGATGAAACCGTGGG AACTTCAAACGTTCGGTCGGTGGAATACATGAGAGAACTCACGGAAAGCA TGATGGATTATGTGTTTGAACTGAATAAGAATGGTGAGATGCCATTGTGG TTTGATTGTGCCAGATCTTACGGGAAAAGCGAAGAGTTCGTTGGAGATTT CCTAAGAAAGAGGGGCATCAAGCCGAAGGATGTCTACGTGAGTAGCAAAT GGGGCTACGAGTACGTGGCTGACTGGAATGTTGCTCTGGCGGACGGCGAA CCACACGAAGTAAAGGATCATTCAATTGGGGTGAGGCCCGATTCTTTTTT ACATAAAATATACATGGAGAATGTAATACCATGATGATTGCTCGGCAAGC TGTACCGTCAGCAGCGGCCTGTGATCTTCAGCCGTGATTGTTCATCGGGA CCCCTTTCCGCCCCCCCACTCCTCCCCTTTTCCGCCTTGCCCCACCGCTT TGGCGGGTCAGATGTTCCTCAAGCAGGTGGAAGAGACCGTCGCCCGGCTC GGCGAGTATGTCCGCTTGTACCAGATCCACTCGGCCACCTTCGAGTCCGG CGTGCTGACCAACGCGGACGTGCTGGACGCCCTGGCCCGCTGCCGCCGCG AGCGCGGCTGGCGCATTGGCCTGTCCGTCTCCGGCCCGAACCAGGACGCG GTCATCCGCGCGGCGCTGGCGGTGGAGACCGCGGACGGCGCGCGGCTCTT CGACTCCGTGCAGTGCACGTTCAACCTGCTGGAGCAGAAGGCGGGCCCCG CGCTGCTGGAGGCGCACTGGGCGGGCGGGACGCCATCGCTGGGGGAGGGC CTACAACGGGCCGGGCGCTGCGCAGCTGGACGCTGTCCGCGTCTATGCTG CCGAAAGCCGGGCGCTGCGGGAGTTGGGCGCCGCCCGACGCTGCGTTGGG CTACGTGTTGGCGCAGCCCTTCCGCCCGCGGGTGCTGAGCGGGGCCGCCG CGCGCGCGCAGCTGGCGGCCAACGCCAAGGCGCAGGCGGTGGGCGCGCTG CTGGGGGAGGGCGGCGCGCTGGGGCCCGCGGTCCTGGCCGAGCTGATGGA GGGGTGCCGGGTGGGCAGCGAGGAGTACTGGGCGGAGCGCCGGCGCGCCG CCTGGAAC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1024:237640..238947+

>mRNA_H-akashiwo_Contig1024.4.1 ID=mRNA_H-akashiwo_Contig1024.4.1|Name=mRNA_H-akashiwo_Contig1024.4.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=942bp|location=Sequence derived from alignment at H-akashiwo_Contig1024:237640..238947+ (Heterosigma akashiwo CCMP452)
ATGCATCGTAGCAACAACTACTGGTTTCTTTCATTCTCGGTTATGCTTTC
ATCGATTTGTGGTTGTTTGGGATTCGTGCTCCCCAATAACAATGAGCTGG
ACCAAGACTTGCCACGTTTCGGTCTGGGTACGGCAGCACTCGGCCGTCCG
GGTTATATCAACTTGGATCGGGATGAAACCGTGGGAACTTCAAACGTTCG
GTCGGTGGAATACATGAGAGAACTCACGGAAAGCATGATGGATTATGTGT
TTGAACTGAATAAGAATGGTGAGATGCCATTGTGGTTTGATTGTGCCAGA
TCTTACGGGAAAAGCGAAGAGTTCGTTGGAGATTTCCTAAGAAAGAGGGG
CATCAAGCCGAAGGATGTCTACGTGAGTAGCAAATGGGGCTACGAGTACG
TGGCTGACTGGAATGTTGCTCTGGCGGACGGCGAACCACACGAAGTAAAG
GATCATTCAATTGGGATGTTCCTCAAGCAGGTGGAAGAGACCGTCGCCCG
GCTCGGCGAGTATGTCCGCTTGTACCAGATCCACTCGGCCACCTTCGAGT
CCGGCGTGCTGACCAACGCGGACGTGCTGGACGCCCTGGCCCGCTGCCGC
CGCGAGCGCGGCTGGCGCATTGGCCTGTCCGTCTCCGGCCCGAACCAGGA
CGCGGTCATCCGCGCGGCGCTGGCGGTGGAGACCGCGGACGGCGCGCGGC
TCTTCGACTCCGTGCAGTGCACGTTCAACCTGCTGGAGCAGAAGGCGGGC
CCCGCGCTGCTGGAGGCGCACTGGGCGGGCGGGACGCCATCGCTGGGGGA
GGGCCTACAACGGGCCGGGCGCTGCGCAGCTGGACGCTGTCCGCGTCTAT
GCTGCCGAAAGCCGGGCGCTGCGGGAGTTGGGCGCCGCCCGACGCTGCGT
TGGGCTACGTGTTGGCGCAGCCCTTCCGCCCGCGGGTGCTGA
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