mRNA_H-akashiwo_Contig1019.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1019.2.1
Unique NamemRNA_H-akashiwo_Contig1019.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 467 bits (1201), Expect = 5.470e-163
Identity = 223/311 (71.70%), Postives = 266/311 (85.53%), Query Frame = 1
Query:    7 GEDTMIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQASFTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSEQLGLGGDLVLRAYTDADFCQDRIKGKSVTGYVIMLGDSPIVWASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIEDNSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADIFTRALNA 939
            G + M+AVYVDDLV+  +  +V+++ K S AS++ +TD G L QILGIKV RD RNKCF L  Q SF K+A++KFGLD+LPA +TP+DHTVDL PTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYLKGTQSE L LGGDLVLRA++D+DFC DR+ GKSVTGY++ LGD+PIVW+SKLQ A +TSTVEAEYL+LRS +KDIMWLR LL ++GCPQ EPTP +EDNSAC+EWA +M+V+++NRHFHVSYHLAKEQV+LGTI+M Y KT DQ+ADI T+ALNA
Sbjct:   28 GNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLS-QTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTKALNA 337          
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 243 bits (621), Expect = 9.100e-70
Identity = 130/314 (41.40%), Postives = 192/314 (61.15%), Query Frame = 1
Query:    1 TTGEDTMIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQASFTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLP--DSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSEQLGLGGDLVLRAYTDADFCQDRIKGKSVTGYVIMLGDSPIVWASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIEDNSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADIFTRALN 936
            +TG  T+I+VYVDD+VL S+  S ++ +K + +  + ++D+G +  ILGIKV RD R      L Q SF +EA  KF +     V  P++  +D+         L   ++ ++RS+VGT+ W+A WT PE+A+++H L +  ++P      A+    RYL  T+ + + LGG L L AY DADFC +R KG+S +G+ I LG SPI+W+S++Q   + +T EAEY+SLR+ + D+MWL+ LL  LG  Q    P  EDN ACI WA +  VS+  RH HVSYH  KE V    I++ Y  T  Q+AD+FT+ L+
Sbjct:  671 STGGKTLISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRD-RTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQG-CVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTKPLD 982          
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 224 bits (570), Expect = 1.390e-68
Identity = 108/156 (69.23%), Postives = 128/156 (82.05%), Query Frame = 1
Query:    7 GEDTMIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQASFTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYL 474
            G + M+AVYVDDLV+  +  +++++ K S AS++ +TD G L QILGIKV RD RNKCF L  Q SF K+A++KFGLD+LPA +TP+DHTVDL PTPGFK+ L D+N YRSMVGTLAWVANWTRPELAFTVHKLQR Q NPEPKHFEA QRAFRYL
Sbjct:  114 GNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLS-QTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268          
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A146HFR8_MYCCL (Polyprotein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HFR8_MYCCL)

HSP 1 Score: 201 bits (510), Expect = 4.100e-58
Identity = 109/313 (34.82%), Postives = 179/313 (57.19%), Query Frame = 1
Query:    4 TGEDTMIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQASFTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLPDS---NRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSEQLGLGGDLVLRAYTDADFCQDRIKGKSVTGYVIMLGDSPIVWASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIEDNSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADIFTRAL 933
            T   T++AV+VDD+ L +     +T +K   +S+FK+TDLGPL QILG++++++  +     L QA++    +   G++   AV+TP+D  V L P       + D+   + Y S +G L ++A  TRP+LAF V  L ++   P P+H  A +R FRYL+GT S  +   G   L  ++DAD+  D    +S++GY+  LG SP+ WAS+ Q   + ST+EAEY++      +I+WLR L  +LG     PTP   DN + I++A   +   +++H  + +H  +E+V    +++ +  + D LADI T+ L
Sbjct:   52 TDSPTIVAVHVDDMTLCARTDEELTQIKGELSSKFKVTDLGPLKQILGMEISQNPTDGSI-RLSQANYASRVLESVGMEKANAVQTPLDPNVKLTPLAKGDPRIGDTAFRHGYLSGIGKLMYLAVATRPDLAFAVQHLSQFSIRPGPEHMSALKRVFRYLRGTTSLGIAFRGSGDLHIFSDADWGNDNTDRRSISGYLSFLGASPLSWASRKQPTVALSTMEAEYMAAARTTCEIIWLRQLASELGISVEAPTPIHIDNQSAIKFAENPMFHARSKHIDMRHHFVRERVASNEVKLVHCASEDNLADILTKPL 363          
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A5E8CAX7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8CAX7_9ASCO)

HSP 1 Score: 199 bits (506), Expect = 3.050e-55
Identity = 118/319 (36.99%), Postives = 175/319 (54.86%), Query Frame = 1
Query:   19 MIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQAS-FTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSEQLGLGGDLVLR--AYTDADFCQDRIKGKSVTGYVIMLGDSPIVWASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIEDNSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADIFTRALNA---EVLKGI 957
            +IA+YVDDL++  N   VI   K+S +S FK+ DLGP+ Q LG++V    +   + + +  S +  + + +FG+    +V+TP+  T DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  +P+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+   KS TGYV +L   PI WA + Q + ++S+VE+EY+SL    K+  W+  LL     P   P    EDN  CI  A+  V  R+ +H  V YH+ +  +  G I + Y  T   LAD+FT+ L     E L+G+
Sbjct:  287 IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRV----KQSPYHITVDVSRYIFDMLEEFGMQNCSSVKTPLP-TRDLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQSPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGL 599          
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A5E8C8X3_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C8X3_9ASCO)

HSP 1 Score: 201 bits (512), Expect = 1.810e-54
Identity = 119/319 (37.30%), Postives = 175/319 (54.86%), Query Frame = 1
Query:   19 MIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQAS-FTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSEQLGLGGDLVLR--AYTDADFCQDRIKGKSVTGYVIMLGDSPIVWASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIEDNSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADIFTRALNA---EVLKGI 957
            +IA+YVDDL++  N   VI   K+S +S FK+ DLGP+ Q LG++V    +   + + +  S +  + + +FG+    +V+TP+  T DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  NP+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+   KS TGYV +L   PI WA + Q + ++S+VE+EY+SL    K+  W+  LL     P   P    EDN  CI  A+  V  R+ +H  V YH+ +  +  G I + Y  T   LAD+FT+ L     E L+G+
Sbjct:  957 IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGLRV----KQSPYHITVDVSRYIFDMLEEFGMQNCSSVKTPLP-TRDLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQNPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGL 1269          
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A5E8BZ07_9ASCO (Uncharacterized protein n=4 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZ07_9ASCO)

HSP 1 Score: 201 bits (511), Expect = 2.350e-54
Identity = 119/319 (37.30%), Postives = 175/319 (54.86%), Query Frame = 1
Query:   19 MIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQAS-FTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSEQLGLGGDLVLR--AYTDADFCQDRIKGKSVTGYVIMLGDSPIVWASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIEDNSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADIFTRALNA---EVLKGI 957
            +IA+YVDDL++  N   VI   K+S +S FK+ DLGP+ Q LG++V    +   + + +  S +  + + +FG+    +V+TP+  T DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  NP+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+   KS TGYV +L   PI WA + Q + ++S+VE+EY+SL    K+  W+  LL     P   P    EDN  CI  A+  V  R+ +H  V YH+ +  +  G I + Y  T   LAD+FT+ L     E L+G+
Sbjct: 1588 IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRV----KQSPYHITVDVSRYIFDMLEEFGMQNCSSVKTPLP-TRDLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQNPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGL 1900          
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A5E8B667_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8B667_9ASCO)

HSP 1 Score: 201 bits (511), Expect = 2.430e-54
Identity = 119/319 (37.30%), Postives = 175/319 (54.86%), Query Frame = 1
Query:   19 MIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQAS-FTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSEQLGLGGDLVLR--AYTDADFCQDRIKGKSVTGYVIMLGDSPIVWASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIEDNSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADIFTRALNA---EVLKGI 957
            +IA+YVDDL++  N   VI   K+S +S FK+ DLGP+ Q LG++V    +   + + +  S +  + + +FG+    +V+TP+  T DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  NP+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+   KS TGYV +L   PI WA + Q + ++S+VE+EY+SL    K+  W+  LL     P   P    EDN  CI  A+  V  R+ +H  V YH+ +  +  G I + Y  T   LAD+FT+ L     E L+G+
Sbjct: 1480 IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRV----KQSPYHITVDVSRYIFDMLEEFGMQNCSSVKTPLP-TRDLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQNPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGL 1792          
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A5E8C4Z1_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C4Z1_9ASCO)

HSP 1 Score: 201 bits (510), Expect = 2.510e-54
Identity = 119/319 (37.30%), Postives = 175/319 (54.86%), Query Frame = 1
Query:   19 MIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQAS-FTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSEQLGLGGDLVLR--AYTDADFCQDRIKGKSVTGYVIMLGDSPIVWASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIEDNSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADIFTRALNA---EVLKGI 957
            +IA+YVDDL++  N   VI   K+S +S FK+ DLGP+ Q LG++V    +   + + +  S +  + + +FG+    +V+TP+  T DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  NP+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+   KS TGYV +L   PI WA + Q + ++S+VE+EY+SL    K+  W+  LL     P   P    EDN  CI  A+  V  R+ +H  V YH+ +  +  G I + Y  T   LAD+FT+ L     E L+G+
Sbjct:  734 IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRV----KQSPYHITVDVSRYIFDMLEEFGMQNCSSVKTPLP-TRDLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQNPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPIPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGL 1046          
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Match: A0A5E8BG36_9ASCO (Integrase catalytic domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BG36_9ASCO)

HSP 1 Score: 199 bits (507), Expect = 7.370e-54
Identity = 118/319 (36.99%), Postives = 175/319 (54.86%), Query Frame = 1
Query:   19 MIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDLRNKCFFLLIQAS-FTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLPDSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFRYLKGTQSEQLGLGGDLVLR--AYTDADFCQDRIKGKSVTGYVIMLGDSPIVWASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIEDNSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADIFTRALNA---EVLKGI 957
            +IA+YVDDL++  N   VI   K+S +S FK+ DLGP+ Q LG++V    +   + + +  S +  + + +FG+    +V+TP+  T DL+       S  D++ YRS++G L + AN  RP+LA  V  L RY  +P+  H EAA+   RYLKGT    L      V +   Y+DAD+ QD+   KS TGYV +L   PI WA + Q + ++S+VE+EY+SL    K+  W+  LL     P   P    EDN  CI  A+  V  R+ +H  V YH+ +  +  G I + Y  T   LAD+FT+ L     E L+G+
Sbjct:  924 IIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRV----KQSPYHITVDVSRYIFDVLEEFGMQNCSSVKTPLP-TRDLSDF-SESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQSPKSIHMEAAKHTLRYLKGTAELGLEYRAQKVYKLVGYSDADYAQDKQDRKSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCKIPVPLPVTMFEDNQGCIALAQNPVFHRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGL 1236          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1019.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK5.470e-16371.70Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y1P1_HETAK9.100e-7041.40Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6S2_HETAK1.390e-6869.23Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A146HFR8_MYCCL4.100e-5834.82Polyprotein (Fragment) n=1 Tax=Mycena chlorophos T... [more]
A0A5E8CAX7_9ASCO3.050e-5536.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5E8C8X3_9ASCO1.810e-5437.30Uncharacterized protein n=1 Tax=Saprochaete ingens... [more]
A0A5E8BZ07_9ASCO2.350e-5437.30Uncharacterized protein n=4 Tax=Saprochaete ingens... [more]
A0A5E8B667_9ASCO2.430e-5437.30Uncharacterized protein n=1 Tax=Saprochaete ingens... [more]
A0A5E8C4Z1_9ASCO2.510e-5437.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A5E8BG36_9ASCO7.370e-5436.99Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1019contigH-akashiwo_Contig1019:194200..195156 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog4113.PGSC0003DMT400059660
PFAMsRVT_2
Model size957
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.96e-51
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,383NS@33090|Viridiplantae,3GVP7@35493|Streptophyta,44NWX@71274|asterids
DescriptionReverse transcriptase (RNA-dependent DNA polymerase)
Cds size939
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387052.74486-CDS-H-akashiwo_Contig1019:194199..1951381681387052.74486-CDS-H-akashiwo_Contig1019:194199..195138Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1019 194200..195138 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387052.7558851-UTR-H-akashiwo_Contig1019:195138..1951561681387052.7558851-UTR-H-akashiwo_Contig1019:195138..195156Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig1019 195139..195156 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1019.2.1prot_H-akashiwo_Contig1019.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1019 194200..195138 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1019.2.1

>prot_H-akashiwo_Contig1019.2.1 ID=prot_H-akashiwo_Contig1019.2.1|Name=mRNA_H-akashiwo_Contig1019.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=313bp
MIAVYVDDLVLISNHPSVITDLKASFASQFKITDLGPLNQILGIKVTRDL
RNKCFFLLIQASFTKEAISKFGLDFLPAVRTPMDHTVDLAPTPGFKSSLP
DSNRYRSMVGTLAWVANWTRPELAFTVHKLQRYQSNPEPKHFEAAQRAFR
YLKGTQSEQLGLGGDLVLRAYTDADFCQDRIKGKSVTGYVIMLGDSPIVW
ASKLQTAFSTSTVEAEYLSLRSGLKDIMWLRHLLVDLGCPQAEPTPAIED
NSACIEWAREMVVSRKNRHFHVSYHLAKEQVNLGTIQMHYAKTSDQLADI
FTRALNAEVLKGI
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mRNA from alignment at H-akashiwo_Contig1019:194200..195156-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1019.2.1 ID=mRNA_H-akashiwo_Contig1019.2.1|Name=mRNA_H-akashiwo_Contig1019.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=957bp|location=Sequence derived from alignment at H-akashiwo_Contig1019:194200..195156- (Heterosigma akashiwo CCMP452)
ACCACTGGTGAGGATACCATGATTGCAGTGTATGTAGATGACCTTGTCCT TATTAGTAATCATCCTTCCGTAATCACCGATCTCAAAGCCTCTTTTGCAT CTCAGTTTAAAATCACAGATCTAGGTCCTCTTAACCAAATCCTTGGCATC AAAGTAACCAGAGACCTTCGTAATAAATGCTTCTTCCTGCTGATTCAAGC CTCGTTCACTAAGGAGGCCATCTCTAAGTTTGGTTTGGATTTTCTTCCAG CTGTCCGCACTCCCATGGACCACACGGTTGATCTGGCGCCTACACCTGGG TTCAAATCCTCTTTGCCTGATTCAAACAGGTATCGCTCCATGGTTGGGAC CCTGGCTTGGGTGGCTAACTGGACCAGGCCTGAGCTTGCCTTCACAGTGC ACAAGCTCCAACGTTATCAAAGTAACCCTGAGCCTAAACACTTTGAGGCA GCTCAGCGAGCTTTTAGGTACCTCAAAGGCACCCAGTCTGAACAGCTGGG GCTTGGTGGAGACCTTGTTCTTCGAGCCTACACTGATGCTGATTTTTGCC AAGACAGGATAAAAGGCAAATCTGTGACAGGCTATGTGATCATGCTTGGT GACTCACCTATTGTGTGGGCCTCAAAGCTCCAGACTGCATTTAGTACTTC TACTGTGGAAGCTGAGTATCTCTCACTGAGGTCTGGTCTGAAAGACATCA TGTGGCTGAGGCATCTTCTTGTGGACCTTGGCTGCCCTCAGGCTGAACCT ACACCAGCGATTGAGGACAACTCTGCTTGCATTGAGTGGGCAAGAGAAAT GGTGGTTTCCAGGAAAAACAGGCATTTTCATGTGTCATACCACCTGGCTA AGGAGCAGGTCAACCTGGGGACTATCCAGATGCACTATGCCAAGACCAGT GACCAGTTAGCTGACATATTCACCAGGGCCCTGAATGCTGAAGTTTTGAA AGGCATC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1019:194200..195156-

>mRNA_H-akashiwo_Contig1019.2.1 ID=mRNA_H-akashiwo_Contig1019.2.1|Name=mRNA_H-akashiwo_Contig1019.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=939bp|location=Sequence derived from alignment at H-akashiwo_Contig1019:194200..195156- (Heterosigma akashiwo CCMP452)
ATGATTGCAGTGTATGTAGATGACCTTGTCCTTATTAGTAATCATCCTTC
CGTAATCACCGATCTCAAAGCCTCTTTTGCATCTCAGTTTAAAATCACAG
ATCTAGGTCCTCTTAACCAAATCCTTGGCATCAAAGTAACCAGAGACCTT
CGTAATAAATGCTTCTTCCTGCTGATTCAAGCCTCGTTCACTAAGGAGGC
CATCTCTAAGTTTGGTTTGGATTTTCTTCCAGCTGTCCGCACTCCCATGG
ACCACACGGTTGATCTGGCGCCTACACCTGGGTTCAAATCCTCTTTGCCT
GATTCAAACAGGTATCGCTCCATGGTTGGGACCCTGGCTTGGGTGGCTAA
CTGGACCAGGCCTGAGCTTGCCTTCACAGTGCACAAGCTCCAACGTTATC
AAAGTAACCCTGAGCCTAAACACTTTGAGGCAGCTCAGCGAGCTTTTAGG
TACCTCAAAGGCACCCAGTCTGAACAGCTGGGGCTTGGTGGAGACCTTGT
TCTTCGAGCCTACACTGATGCTGATTTTTGCCAAGACAGGATAAAAGGCA
AATCTGTGACAGGCTATGTGATCATGCTTGGTGACTCACCTATTGTGTGG
GCCTCAAAGCTCCAGACTGCATTTAGTACTTCTACTGTGGAAGCTGAGTA
TCTCTCACTGAGGTCTGGTCTGAAAGACATCATGTGGCTGAGGCATCTTC
TTGTGGACCTTGGCTGCCCTCAGGCTGAACCTACACCAGCGATTGAGGAC
AACTCTGCTTGCATTGAGTGGGCAAGAGAAATGGTGGTTTCCAGGAAAAA
CAGGCATTTTCATGTGTCATACCACCTGGCTAAGGAGCAGGTCAACCTGG
GGACTATCCAGATGCACTATGCCAAGACCAGTGACCAGTTAGCTGACATA
TTCACCAGGGCCCTGAATGCTGAAGTTTTGAAAGGCATC
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