prot_H-akashiwo_Contig1011.16.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1011.16.1
Unique Nameprot_H-akashiwo_Contig1011.16.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length134
Homology
BLAST of mRNA_H-akashiwo_Contig1011.16.1 vs. uniprot
Match: A0A4D9D8J2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.470e-18
Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = 0
Query:    6 LRHADLERLPALLKALRQNLRELPKVDLFLPFRIHFVEYGESFITVECYFYFATKNLDEYLFLQQTALLEIGRVIRDQGAMLAYPGRTLDL 96
            LR  D E LP ++  +++ LR LPKVD+  PFR+HF ++G   +++    YFATK+LDEYL+LQQ AL+EI RV+ + G   AYP   LDL
Sbjct:  268 LRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 358          
BLAST of mRNA_H-akashiwo_Contig1011.16.1 vs. uniprot
Match: W7UBI9_9STRA (Small-conductance mechanosensitive channel n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBI9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.620e-18
Identity = 45/91 (49.45%), Postives = 62/91 (68.13%), Query Frame = 0
Query:    6 LRHADLERLPALLKALRQNLRELPKVDLFLPFRIHFVEYGESFITVECYFYFATKNLDEYLFLQQTALLEIGRVIRDQGAMLAYPGRTLDL 96
            LR  D E LP ++  +++ LR LPKVD+  PFR+HF ++G   +++    YFATK+LDEYL+LQQ AL+EI RV+ + G   AYP   LDL
Sbjct:  458 LRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 548          
BLAST of mRNA_H-akashiwo_Contig1011.16.1 vs. uniprot
Match: D7G8R0_ECTSI (Small Conductance Mechanosensitive Ion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R0_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 1.030e-13
Identity = 34/82 (41.46%), Postives = 57/82 (69.51%), Query Frame = 0
Query:    6 LRHADLERLPALLKALRQNLRELPKVDLFLPFRIHFVEYGESFITVECYFYFATKNLDEYLFLQQTALLEIGRVIRDQGAML 87
            LR+AD  ++  +L+ ++  L+++P +DL  PFR+H V++ ES + +    YFATK+ DE+L+LQQ ALLE+ RV++   A +
Sbjct:  289 LRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATM 370          
BLAST of mRNA_H-akashiwo_Contig1011.16.1 vs. uniprot
Match: A0A2E3PY16_9RHOB (Mechanosensitive ion channel protein MscS n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E3PY16_9RHOB)

HSP 1 Score: 54.7 bits (130), Expect = 5.210e-6
Identity = 35/122 (28.69%), Postives = 63/122 (51.64%), Query Frame = 0
Query:    2 HQVHLRH-ADLERLPALLKALRQNLRELPKVDLFLPFRIHFVEYGESFITVECYFYFATKNLDEYLFLQQTALLEIGRVIRDQGAMLAYPGRTLDLNYGARTTGITTDLATALRPATDKPDR 122
            H + LR+  + +++ ++++ +       PKV   +  R+  V YG   + +E + Y +T + DE+L +Q+  LLEIGR+I++ G+  A+P     L   A   G+    A A + A   P R
Sbjct:  530 HTIGLRYETERDQVMSVVRQIHTYFTGHPKVLDHIALRVSLVGYGAYSVDIEIFSYISTSDRDEFLMIQEELLLEIGRIIKENGSDFAFPSNVTYLGRDAGLPGMKRGAA-ATQGADKAPQR 650          
BLAST of mRNA_H-akashiwo_Contig1011.16.1 vs. uniprot
Match: A0A3L8BDV4_9GAMM (Mechanosensitive ion channel family protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3L8BDV4_9GAMM)

HSP 1 Score: 52.0 bits (123), Expect = 4.030e-5
Identity = 29/89 (32.58%), Postives = 50/89 (56.18%), Query Frame = 0
Query:    6 LRHADLERLPALLKALRQNLRELPKVDLFLPFRIHFVEYGESFITVECYFYFATKNLDEYLFLQQTALLEIGRVIRDQGAMLAYPGRTL 94
            +R+ D+ RLPA++ A++  L E P++D      ++F +YG S +    Y    T N  +Y  ++Q  L +I  +++  GA  A+P RTL
Sbjct:  253 VRYDDVNRLPAIVAAVKAMLAEHPEIDHNQTMIVNFNQYGASSLDFFVYCMTITTNWVKYHEVKQDVLFKISEIVQQHGAEFAFPTRTL 341          
BLAST of mRNA_H-akashiwo_Contig1011.16.1 vs. uniprot
Match: UPI00146AB547 (mechanosensitive ion channel family protein n=1 Tax=Stappia stellulata TaxID=71235 RepID=UPI00146AB547)

HSP 1 Score: 52.0 bits (123), Expect = 4.480e-5
Identity = 31/105 (29.52%), Postives = 59/105 (56.19%), Query Frame = 0
Query:    2 HQVHLRH-ADLERLPALLKALRQNLRELPKVDLFLPFRIHFVEYGESFITVECYFYFATKNLDEYLFLQQTALLEIGRVIRDQGAMLAYPGRTLDLNYGARTTGI 105
            H V LR+    E++ ++++ +       PKV   +  R+  V YG   + +E + Y +T + DE+L +Q+  LLE+GR+I++ G+  A+P    ++ Y  R +G+
Sbjct:  476 HVVGLRYETGREQVMSVVREIHGFFSAHPKVLDQMALRVSLVGYGAYSVDIEIFSYISTSDRDEFLMIQEELLLEVGRLIKENGSDFAFPS---NVTYLGRDSGL 577          
BLAST of mRNA_H-akashiwo_Contig1011.16.1 vs. uniprot
Match: A0A1H2FWZ1_9HYPH (MscS family membrane protein n=2 Tax=Stappia sp. ES.058 TaxID=1881061 RepID=A0A1H2FWZ1_9HYPH)

HSP 1 Score: 51.6 bits (122), Expect = 6.170e-5
Identity = 27/79 (34.18%), Postives = 46/79 (58.23%), Query Frame = 0
Query:   29 PKVDLFLPFRIHFVEYGESFITVECYFYFATKNLDEYLFLQQTALLEIGRVIRDQGAMLAYPGRTLDLNYGARTTGITT 107
            PKV   +  R+  V YG   + +E + Y +T + DE+L +Q+  LLEI R+I++ G+  A+P    ++ Y  R +G+ T
Sbjct:  561 PKVLNQIALRVSLVGYGTYSVDIEIFSYISTSDRDEFLMIQEELLLEISRIIKENGSDFAFPS---NVTYLGRDSGLPT 636          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1011.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A4D9D8J2_9STRA1.470e-1849.45Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7UBI9_9STRA1.620e-1849.45Small-conductance mechanosensitive channel n=1 Tax... [more]
D7G8R0_ECTSI1.030e-1341.46Small Conductance Mechanosensitive Ion channel n=1... [more]
A0A2E3PY16_9RHOB5.210e-628.69Mechanosensitive ion channel protein MscS n=2 Tax=... [more]
A0A3L8BDV4_9GAMM4.030e-532.58Mechanosensitive ion channel family protein n=2 Ta... [more]
UPI00146AB5474.480e-529.52mechanosensitive ion channel family protein n=1 Ta... [more]
A0A1H2FWZ1_9HYPH6.170e-534.18MscS family membrane protein n=2 Tax=Stappia sp. E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011066Mechanosensitive ion channel MscS, C-terminalSUPERFAMILY82689Mechanosensitive channel protein MscS (YggB), C-terminal domaincoord: 17..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1011contigH-akashiwo_Contig1011:331091..354641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1011.16.1mRNA_H-akashiwo_Contig1011.16.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1011 331091..354641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1011.16.1 ID=prot_H-akashiwo_Contig1011.16.1|Name=mRNA_H-akashiwo_Contig1011.16.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=134bp
MHQVHLRHADLERLPALLKALRQNLRELPKVDLFLPFRIHFVEYGESFIT
VECYFYFATKNLDEYLFLQQTALLEIGRVIRDQGAMLAYPGRTLDLNYGA
RTTGITTDLATALRPATDKPDRDAASAVGGGGPG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011066MscS_channel_C