mRNA_H-akashiwo_Contig1010.2.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig1010.2.1
Unique NamemRNA_H-akashiwo_Contig1010.2.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: A0A7S3Y147_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y147_HETAK)

HSP 1 Score: 354 bits (909), Expect = 1.230e-121
Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 1
Query:    1 SSQKIVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEEEIQKDRMHLSQIQFLRLYNGQVDKKGFLCCSSLRLPNADLSTLQLDNATFSDSELHHTLFRGTTFTSIVFDKANLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXLAARGAAP 636
            SSQKIVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEEEIQKDRMHLSQIQFLRLYNGQVDKKGFLCCSSLRLPNADLSTLQLDNATFSDSELHHTLFRGTTFTSIVFDKANLEEXXXXXXXXXXXXXXXXXXXXXXXXXX LAARGAAP
Sbjct:   20 SSQKIVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEEEIQKDRMHLSQIQFLRLYNGQVDKKGFLCCSSLRLPNADLSTLQLDNATFSDSELHHTLFRGTTFTSIVFDKANLEEXXXXXXXXXXXXXXXXXXXXXXXXXXALAARGAAP 231          
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: UPI001EAFFBBF (BTB/POZ domain-containing protein KCTD7-like isoform X1 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFFBBF)

HSP 1 Score: 102 bits (255), Expect = 4.270e-23
Identity = 59/117 (50.43%), Postives = 77/117 (65.81%), Query Frame = 1
Query:   13 IVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEEEIQKDRMHLSQIQFLRLYNGQ 363
            +V LNVGG   TTS +TLT  PDSML+ MFSG+HP+  D DG YFID DG  F HILN+LR G++PPPE    + + +   A YF L EL+E+L  + +K    LS I+ ++L N Q
Sbjct:   10 VVDLNVGGRHLTTSLSTLTKYPDSMLAAMFSGRHPVTQDKDGRYFIDVDGDVFVHILNFLRFGTMPPPE----RALGVREYAEYFGLQELKELLPTDFEKV---LSGIRKMKLPNYQ 119          
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: UPI001EB0652C (BTB/POZ domain-containing protein KCTD14-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB0652C)

HSP 1 Score: 101 bits (252), Expect = 9.080e-23
Identity = 56/101 (55.45%), Postives = 68/101 (67.33%), Query Frame = 1
Query:   10 KIVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEEEIQK 312
            K+V LNVGG   TTS +TLT  PDSML+ MFSG+HP+  D DG YFID DG  F HILN+LR G +PPPE   AQ+V     A YF L EL+  + E+ +K
Sbjct:    5 KVVDLNVGGRHLTTSLSTLTKYPDSMLAAMFSGRHPVAKDKDGRYFIDVDGDVFVHILNFLRFGKMPPPER--AQEV--NEYAEYFGLQELKAPVTEDFEK 101          
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: UPI00201EB90C (BTB/POZ domain-containing protein KCTD7-like isoform X4 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EB90C)

HSP 1 Score: 97.8 bits (242), Expect = 1.900e-22
Identity = 53/100 (53.00%), Postives = 66/100 (66.00%), Query Frame = 1
Query:   13 IVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEEEIQK 312
            ++ LNVGG   TTS +TLT  PDSML+ MFSG+HP+  D DG YFID DG  F HILN+LR G +PPPE   AQ V     A YF + EL+  + E+ +K
Sbjct:    8 VIDLNVGGRHLTTSLSTLTKYPDSMLAAMFSGRHPVAKDQDGRYFIDVDGDVFVHILNFLRFGKMPPPER--AQDV--NEYAEYFGIQELKAPVTEDFEK 103          
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: UPI00201F231E (BTB/POZ domain-containing protein KCTD7-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F231E)

HSP 1 Score: 98.2 bits (243), Expect = 3.670e-22
Identity = 51/92 (55.43%), Postives = 62/92 (67.39%), Query Frame = 1
Query:   10 KIVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELR 285
            ++V LNVGG   TTS +TLT  PDSML+ MFSG+HP+  D DG YFID DG  F HILN+LR G +PPPE  +     +   A YF L+ELR
Sbjct:    5 QVVDLNVGGRHLTTSLSTLTKYPDSMLATMFSGRHPVAKDKDGRYFIDVDGDVFVHILNFLRFGKMPPPERASE----VNEYAEYFGLEELR 92          
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: UPI00201E8700 (BTB/POZ domain-containing protein KCTD7-like isoform X3 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201E8700)

HSP 1 Score: 98.2 bits (243), Expect = 5.060e-22
Identity = 51/92 (55.43%), Postives = 62/92 (67.39%), Query Frame = 1
Query:   10 KIVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELR 285
            ++V LNVGG   TTS +TLT  PDSML+ MFSG+HP+  D DG YFID DG  F HILN+LR G +PPPE  +     +   A YF L+ELR
Sbjct:    5 QVVDLNVGGRHLTTSLSTLTKYPDSMLATMFSGRHPVAKDKDGRYFIDVDGDVFVHILNFLRFGKMPPPERASQ----VNEYAEYFGLEELR 92          
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: UPI00201EA74C (BTB/POZ domain-containing protein KCTD6-like isoform X2 n=8 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201EA74C)

HSP 1 Score: 99.4 bits (246), Expect = 6.880e-22
Identity = 53/101 (52.48%), Postives = 67/101 (66.34%), Query Frame = 1
Query:   10 KIVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEEEIQK 312
            ++V LNVGG   TTS +TLT  PDSML+ MFSG+HP+  D DG YFID DG  F HILN+LR G +PPPE  +     +   A YF L+ELR  + EE ++
Sbjct:    5 QVVDLNVGGRHLTTSLSTLTKYPDSMLATMFSGRHPVAKDKDGRYFIDVDGDVFVHILNFLRFGKMPPPERASE----VNEYAEYFGLEELRAPVLEEFEQ 101          
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: A0A812P059_9DINO (FIP2 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812P059_9DINO)

HSP 1 Score: 99.0 bits (245), Expect = 1.650e-21
Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 1
Query:   13 IVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYF 267
            IV LN+GG + TT+  TL A+PDSML  MFSGKHP++ D DG YFIDRDG  F HILNYLRDG+LP   +    ++ L REA ++
Sbjct:   16 IVHLNIGGQRLTTTLATLRAEPDSMLGLMFSGKHPVLRDADGCYFIDRDGRQFHHILNYLRDGTLPIG-LSRVDRLELLREADFY 99          
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: UPI00201F77A7 (uncharacterized protein LOC124114491 n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F77A7)

HSP 1 Score: 97.8 bits (242), Expect = 3.320e-21
Identity = 52/100 (52.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query:   13 IVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEEEIQK 312
            +V LNVGG   TTS +TLT  PDSML+ MFSG+HPI  D DG YFID DG  F H+LN+LR G +PPPE  +     +   A YF L EL+  + E+  K
Sbjct:    8 VVDLNVGGRHLTTSLSTLTKYPDSMLAAMFSGRHPIAKDKDGRYFIDVDGDVFVHVLNFLRFGKMPPPERASE----VNEYAEYFGLQELKAPITEDFNK 103          
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Match: A0A078BCE2_STYLE (Btb poz domain-containing protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078BCE2_STYLE)

HSP 1 Score: 99.4 bits (246), Expect = 3.700e-21
Identity = 63/159 (39.62%), Postives = 88/159 (55.35%), Query Frame = 1
Query:   10 KIVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFIDRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEEEIQKDRMHLSQIQFLRLYNGQVDKKGFLCCSSLRLPNADLSTLQLDNATFSDSELHHTLFRG 486
            KI+RL+VGG  F TS  TL + P+SML+ MFSG+H +I D DG YFIDRDG+ F++ILNYLRDG+   P  +      L +E ++F ++ L   L++E Q     +S  + L L N             L+LP    ST+Q+       S L    F+G
Sbjct:    9 KILRLSVGGVHFETSLETLISDPNSMLAAMFSGRHNVIKDEDGRYFIDRDGTHFRYILNYLRDGNTYIPFENQQLLDELYKEVQFFNIENLLHRLDQERQGGGKKISYTKVLELINFST--------KPLQLPGIKFSTIQIRYLNLDRSNLRGCDFQG 159          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1010.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y147_HETAK1.230e-12199.53Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI001EAFFBBF4.270e-2350.43BTB/POZ domain-containing protein KCTD7-like isofo... [more]
UPI001EB0652C9.080e-2355.45BTB/POZ domain-containing protein KCTD14-like n=1 ... [more]
UPI00201EB90C1.900e-2253.00BTB/POZ domain-containing protein KCTD7-like isofo... [more]
UPI00201F231E3.670e-2255.43BTB/POZ domain-containing protein KCTD7-like n=1 T... [more]
UPI00201E87005.060e-2255.43BTB/POZ domain-containing protein KCTD7-like isofo... [more]
UPI00201EA74C6.880e-2252.48BTB/POZ domain-containing protein KCTD6-like isofo... [more]
A0A812P059_9DINO1.650e-2157.65FIP2 protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
UPI00201F77A73.320e-2152.00uncharacterized protein LOC124114491 n=2 Tax=Halio... [more]
A0A078BCE2_STYLE3.700e-2139.62Btb poz domain-containing protein n=1 Tax=Stylonyc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1010contigH-akashiwo_Contig1010:16865..17608 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog6500.XP_005091119.1
PFAMsBTB_2,DUSP,Ribosomal_L18p,UCH,Ubiquitin_3,zf-B_box
Model size744
Max annot lvl2759|Eukaryota
KEGG koko:K11835,ko:K11839,ko:K11848,ko:K21343,ko:K21917,ko:K21919,ko:K21922
KEGG Pathwayko04137,ko04144,ko04934,map04137,map04144,map04934
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.46e-19
EggNOG OGsCOG1357@1|root,COG5560@1|root,KOG1665@2759|Eukaryota,KOG1870@2759|Eukaryota,3A9SW@33154|Opisthokonta
EC3.4.19.12
DescriptionBTB/POZ domain
Cds size744
COG categoryO
BRITEko00000,ko00001,ko01000,ko01002,ko04121,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387050.1461642-CDS-H-akashiwo_Contig1010:16864..176081681387050.1461642-CDS-H-akashiwo_Contig1010:16864..17608Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig1010 16865..17608 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1010.2.1prot_H-akashiwo_Contig1010.2.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig1010 16865..17608 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig1010.2.1

>prot_H-akashiwo_Contig1010.2.1 ID=prot_H-akashiwo_Contig1010.2.1|Name=mRNA_H-akashiwo_Contig1010.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=248bp
SSQKIVRLNVGGSKFTTSKTTLTAQPDSMLSRMFSGKHPIIVDGDGSYFI
DRDGSCFQHILNYLRDGSLPPPEMDTAQKVILEREARYFLLDELREVLEE
EIQKDRMHLSQIQFLRLYNGQVDKKGFLCCSSLRLPNADLSTLQLDNATF
SDSELHHTLFRGTTFTSIVFDKANLEEADFSGARFINTTRFRGARLRGAR
FEGALAARGAAPDFAGADLRGADFTNAEMPGADFTGCCCDGADFTGAL
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mRNA from alignment at H-akashiwo_Contig1010:16865..17608-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig1010.2.1 ID=mRNA_H-akashiwo_Contig1010.2.1|Name=mRNA_H-akashiwo_Contig1010.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=744bp|location=Sequence derived from alignment at H-akashiwo_Contig1010:16865..17608- (Heterosigma akashiwo CCMP452)
TCAAGTCAAAAGATTGTTCGGTTGAATGTCGGAGGTTCCAAATTCACAAC GTCGAAAACAACTCTAACCGCCCAACCCGACAGCATGCTATCCCGAATGT TCAGCGGAAAACACCCAATAATTGTTGACGGAGATGGGAGTTATTTTATT GATAGGGATGGAAGTTGTTTTCAGCATATTCTTAACTATCTTAGGGATGG GTCTTTGCCGCCACCTGAGATGGACACAGCCCAGAAAGTCATTCTTGAGA GAGAGGCGCGATATTTCCTTTTGGATGAACTGAGGGAAGTTCTGGAAGAA GAAATCCAAAAAGATAGGATGCATCTGTCCCAAATTCAGTTCTTGAGGCT GTACAATGGTCAGGTGGACAAAAAGGGATTCCTGTGTTGCAGCAGCTTGC GGCTTCCAAATGCAGACCTCTCCACCCTGCAGCTAGATAATGCCACGTTC AGTGACTCAGAACTCCACCATACCTTGTTCAGAGGGACCACCTTCACTTC CATCGTCTTCGACAAAGCGAATCTCGAGGAGGCTGATTTCTCCGGGGCCC GGTTCATCAACACGACGCGCTTCCGGGGGGCCCGGCTGCGGGGCGCCCGC TTCGAGGGCGCGCTGGCCGCGCGCGGGGCGGCCCCGGACTTCGCCGGGGC CGACCTCCGCGGGGCGGACTTCACCAACGCGGAGATGCCCGGGGCGGACT TCACGGGCTGCTGCTGCGACGGGGCGGACTTCACGGGCGCGCTG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig1010:16865..17608-

>mRNA_H-akashiwo_Contig1010.2.1 ID=mRNA_H-akashiwo_Contig1010.2.1|Name=mRNA_H-akashiwo_Contig1010.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=744bp|location=Sequence derived from alignment at H-akashiwo_Contig1010:16865..17608- (Heterosigma akashiwo CCMP452)
TCAAGTCAAAAGATTGTTCGGTTGAATGTCGGAGGTTCCAAATTCACAAC
GTCGAAAACAACTCTAACCGCCCAACCCGACAGCATGCTATCCCGAATGT
TCAGCGGAAAACACCCAATAATTGTTGACGGAGATGGGAGTTATTTTATT
GATAGGGATGGAAGTTGTTTTCAGCATATTCTTAACTATCTTAGGGATGG
GTCTTTGCCGCCACCTGAGATGGACACAGCCCAGAAAGTCATTCTTGAGA
GAGAGGCGCGATATTTCCTTTTGGATGAACTGAGGGAAGTTCTGGAAGAA
GAAATCCAAAAAGATAGGATGCATCTGTCCCAAATTCAGTTCTTGAGGCT
GTACAATGGTCAGGTGGACAAAAAGGGATTCCTGTGTTGCAGCAGCTTGC
GGCTTCCAAATGCAGACCTCTCCACCCTGCAGCTAGATAATGCCACGTTC
AGTGACTCAGAACTCCACCATACCTTGTTCAGAGGGACCACCTTCACTTC
CATCGTCTTCGACAAAGCGAATCTCGAGGAGGCTGATTTCTCCGGGGCCC
GGTTCATCAACACGACGCGCTTCCGGGGGGCCCGGCTGCGGGGCGCCCGC
TTCGAGGGCGCGCTGGCCGCGCGCGGGGCGGCCCCGGACTTCGCCGGGGC
CGACCTCCGCGGGGCGGACTTCACCAACGCGGAGATGCCCGGGGCGGACT
TCACGGGCTGCTGCTGCGACGGGGCGGACTTCACGGGCGCGCTG
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