prot_H-akashiwo_Contig1.141.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1.141.1
Unique Nameprot_H-akashiwo_Contig1.141.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length269
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig1.141.1 vs. uniprot
Match: A0A7S3XND9_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XND9_HETAK)

HSP 1 Score: 486 bits (1252), Expect = 4.580e-167
Identity = 246/268 (91.79%), Postives = 259/268 (96.64%), Query Frame = 0 
Query:    1 MYLNKEDKAITILSCCRDTHKIYPALRVHSDRVVITKEAIQNRCKEKFGVGILPSLQAPAANGDSALINRTDPAYLKAMAEQGRRDAEARAELWAEYLKDRLTLPTPAEAKAQGGKDGPFLRPKLGDTWLEGLKGKGEDALLMCSPRPHPEGAGAVDRLRNRTSSFELFRQSSEQFQVDAKEASRQSTNARRSQQQLEAVMNALDSLAKTDDAGLAGLSTAARRWRVAYRRVRCGLVCEGFRARLRRTPAYQKYMEKMDSLMPQATAP 268
            MYLNKEDKAITILSCCRDTHKIYPALRVHSDR+VITKEAI+NRCKEKFGVGILPSLQAPAA+G S  +NRTDPAYLKA+AEQGRRDAEARAELWAEYLKDRLTLPTPAEAKAQ GKDGPFLRPKLGDTWLEGLKGKGEDALLMCSPRPHPEGAGAVDRLR+RTSSFELFR+SSE+F++DA EASRQST+ARRSQQQLEAVMNAL SLA  +DAGLAGLS AARRWRVAYRRVRCGLVCEGFRARLRRTPAYQKYMEK+DSLMPQATAP
Sbjct:  398 MYLNKEDKAITILSCCRDTHKIYPALRVHSDRIVITKEAIENRCKEKFGVGILPSLQAPAADGASPRVNRTDPAYLKAIAEQGRRDAEARAELWAEYLKDRLTLPTPAEAKAQDGKDGPFLRPKLGDTWLEGLKGKGEDALLMCSPRPHPEGAGAVDRLRSRTSSFELFRKSSEKFKLDAMEASRQSTSARRSQQQLEAVMNALGSLANAEDAGLAGLSPAARRWRVAYRRVRCGLVCEGFRARLRRTPAYQKYMEKIDSLMPQATAP 665
[Close]
BLAST of mRNA_H-akashiwo_Contig1.141.1 vs. uniprot
Match: A0A7S3UX82_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX82_HETAK)

HSP 1 Score: 117 bits (292), Expect = 3.480e-26
Identity = 64/112 (57.14%), Postives = 77/112 (68.75%), Query Frame = 0 
Query:    1 MYLNKEDKAITILSCCRDTHKIYPALRVHSDRVVITKEAIQNRCKEKFGVGILPSLQ-APAANGDSALINRT-----DPAYLKAMAEQGRRDAEARAELWAEYLKDRLTLPT 106
            MY N E K ITILS CR+T K +PALR++S+R+ I KE I+ RC EKFG  I+P+LQ   A  G  A+++       DPAYL A+AEQGRRD  AR ELWAEYL  RL LPT
Sbjct:  412 MYSNTEAKVITILSLCRETQKPFPALRLYSNRIPIKKEDIEKRCLEKFGCKIMPALQQTKALEGGPAVMSAKVLSGQDPAYLAALAEQGRRDTVARGELWAEYLTARLQLPT 523
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1.141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3XND9_HETAK4.580e-16791.79Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S3UX82_HETAK3.480e-2657.14Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1contigH-akashiwo_Contig1:5560796..5585993 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1.141.1mRNA_H-akashiwo_Contig1.141.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1 5560298..5586043 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1.141.1 ID=prot_H-akashiwo_Contig1.141.1|Name=mRNA_H-akashiwo_Contig1.141.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=269bp
MYLNKEDKAITILSCCRDTHKIYPALRVHSDRVVITKEAIQNRCKEKFGV
GILPSLQAPAANGDSALINRTDPAYLKAMAEQGRRDAEARAELWAEYLKD
RLTLPTPAEAKAQGGKDGPFLRPKLGDTWLEGLKGKGEDALLMCSPRPHP
EGAGAVDRLRNRTSSFELFRQSSEQFQVDAKEASRQSTNARRSQQQLEAV
MNALDSLAKTDDAGLAGLSTAARRWRVAYRRVRCGLVCEGFRARLRRTPA
YQKYMEKMDSLMPQATAP*
back to top