prot_H-akashiwo_Contig1246.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig1246.2.1
Unique Nameprot_H-akashiwo_Contig1246.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length249
Homology
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A835ZCE2_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE2_9STRA)

HSP 1 Score: 153 bits (387), Expect = 6.230e-39
Identity = 108/220 (49.09%), Postives = 141/220 (64.09%), Query Frame = 0
Query:   40 RRAAFACGT----FQNSSVSLPSN------LQRQHLCPLQAYH---FSTDVPSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTADIKVGDAVAVAVEDLDAYNKFLEADSAGLIKLA----AASPADASXXXXXXXXXXXXXXXXXXXXXXXVPGA-RLSPAARHFAESKGLDATGLAGSVKGGKI 241
            RR+++AC        + +V++P +      L++Q L    A H    S++ PS+T   MPALSPTME+GTIT W  +PG   A GDVLC+VETDKATV++E+QE+GVLAKIL+ EG  ++KVG  VAV VED  AY+ F +AD+AG +       A S  D+       XXXXXXXXXXXXX    VP     SPAARH A+SKG+D   LAGS +GG++
Sbjct:   26 RRSSYACAIQGAEIHSGAVAIPRSRAGHRYLRQQGLQDGNAVHRRWLSSEAPSFTVVNMPALSPTMETGTITKWHAQPGTALAPGDVLCDVETDKATVAFEVQEDGVLAKILVQEGGGEVKVGSPVAVTVEDEAAYDAFTKADAAGSLPYFSGEDAPSATDSQPQAPAAXXXXXXXXXXXXXANRTVPEEFAYSPAARHLAQSKGIDIVSLAGSGRGGRV 245          
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A7S2ALJ9_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALJ9_9STRA)

HSP 1 Score: 143 bits (360), Expect = 6.100e-36
Identity = 85/176 (48.30%), Postives = 109/176 (61.93%), Query Frame = 0
Query:   73 FSTDVPSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTADIKVGDAVAVAVEDLDAYNKFLEADSAGLIKLAA---ASPADASXXXXXXXXXXXXXXXXXXXXXXXVPGARLSPAARHFAESKGLDATGLAGSVKGGKIITKG 245
            FS++V  Y T  MPALSPTMESGTI  W+ +PG+E AAGDVLC+VETDKAT+++E+Q++ VLAK L+  G   I +G AVA+ V+D+ AY  FL AD+AG I + A    +   A                             L+PAARH +ESKGLD  GLAG+ KGG+I TKG
Sbjct:   71 FSSEV-EYVTVVMPALSPTMESGTIAEWSKQPGEEIAAGDVLCQVETDKATMAFEMQDDAVLAKQLVPAGDESINIGTAVAITVDDMAAYEAFLAADAAGEISIDANDGPAAGGAVDEVETTTGTVSSEAAMIASTRTVADEFLLTPAARHMSESKGLDVRGLAGTGKGGRI-TKG 244          
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A6H5L3X9_9PHAE (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X9_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.800e-34
Identity = 98/186 (52.69%), Postives = 124/186 (66.67%), Query Frame = 0
Query:   65 LCPLQAYHFSTDVPSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTADIKVGDAVAVAVEDLDAYNKFLEADSAGLIKLAAAS--------PADASXXXXXXXXXXXXXXXXXXXXXXXVPGARL-SPAARHFAESKGLDATGLAGSVKGGKI 241
            L P Q     T    +T   MPALSPTMESGT+T W   PG E +AGDV+C+VETDKATV++++Q++GVLA+I+ + G+ ++ VG  VAV VED DAY  F++AD+AG +  AA               XXXXXXXXXXXXXXXX       VP A L SPAARH A+SKG+DA+ L G+ KGG+I
Sbjct:   76 LLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYAAFVKADAAGEVDFAALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFSPAARHMAQSKGIDASSLEGTGKGGRI 261          
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A812V1C5_SYMMI (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V1C5_SYMMI)

HSP 1 Score: 133 bits (335), Expect = 1.290e-32
Identity = 79/177 (44.63%), Postives = 108/177 (61.02%), Query Frame = 0
Query:   72 HFSTDVPSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTADIKVGDAVAVAVEDLDAYNKFLE--ADSAGL-IKLAAASPADASXXXXXXXXXXXXXXXXXXXXXXXVPGARLSPAARHFAESKGLDATGLAGSVKGGKIITKG 245
            HFST++ S T   MP+LSPTM  GTI+SW   PG+   AGD+LC+VETDKA+V +E+Q++GVLAKIL+D G A+++ G  +A+ VED   Y  FL+  AD+  + +  AAASP  A                            +LSPAARH  +S+ LD + + GS KGG++ITKG
Sbjct:   40 HFSTEI-SITKLPMPSLSPTMTHGTISSWNKAPGEALKAGDILCDVETDKASVGFEVQDDGVLAKILVDAGGAEVQCGQPIALMVEDDADYQTFLKLPADAYPVAVPAAAASPPAAPSHTPSSAAPSFAGH------------VQLSPAARHMVQSRSLDVSAVHGSSKGGRVITKG 203          
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A7S2R7Y6_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R7Y6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.550e-32
Identity = 85/198 (42.93%), Postives = 112/198 (56.57%), Query Frame = 0
Query:   49 FQNSSVSLPSNLQRQ-HLCPLQAYHFSTDVPSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTADIKVGDAVAVAVEDLDAYNKFLEADSAGLIKLAAASPADASXXXXXXXXXXXXXXXXXXXXXXXVPGARLSPAARHFAESKGLDATGLAGSVKGGKIITKG 245
            +Q   ++L + L+R   L P     F  +VP ++   MPALSPTME G+I+SW  +PG    AG+ L EVETDKA V +E Q++ VLAK+L   G  +  VGD +A+ V D  A+  F  AD+AGL+ L +A    A+    XXXX                    L PAA H A S+G+DAT LAGS KGG+I TKG
Sbjct:    6 WQMLRLALRTALRRPLRLAPGGGRWFGAEVPDFSVVHMPALSPTMERGSISSWAKQPGDSIEAGETLAEVETDKAVVGFEYQDDAVLAKVLDPAGGTEFTVGDPIAITVVDHAAFEAFQTADAAGLVSLPSAGNTPAAVSATXXXXSTASAPTGPVEGRQVTDEFLLMPAAAHLARSRGIDATALAGSGKGGRI-TKG 202          
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A7S3P4Y1_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4Y1_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.400e-30
Identity = 81/174 (46.55%), Postives = 102/174 (58.62%), Query Frame = 0
Query:   76 DVPSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTA-DIKVGDAVAVAVE---DLDAYNKFLEADSAGLIKLAAASPADASXXXXXXXXXXXXXXXXXXXXXXXVPGARLSPAARHFAESKGLDATGLAGSVKGGKIITKG 245
            D P +T F MPALSPTM+SGTI SW L  G  FAAGDVLC +ETDKA V +E Q++G+LAKIL    TA D+ VG  + V  E   D+ A+  ++  D+     +AAA+PA A+                          + L P+ARH AESKGLDAT L GS KGG++ TKG
Sbjct:   73 DYPPHTIFPMPALSPTMDSGTIASWALAEGNSFAAGDVLCSIETDKAAVDFEAQDDGILAKILKQGPTAVDLPVGTPICVVCEEEADVPAFADYVADDA-----VAAAAPATAASEQPVSDAATPAASEAPSTATGASGTSLLLPSARHLAESKGLDATVLKGSGKGGRV-TKG 240          
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A7S2LCD3_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCD3_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.060e-29
Identity = 79/173 (45.66%), Postives = 98/173 (56.65%), Query Frame = 0
Query:   74 STDVPSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTADIKVGDAVAVAVEDLDAYNKFLEADSAGLIKLAAASPADASXXXXXXXXXXXXXXXXXXXXXXXVPGAR-LSPAARHFAESKGLDATGLAGSVKGGKIITKG 245
            S+ +PS+    +PALSPTMESG I  W ++ GQ F  GDVLCEVETDKATV +E Q++GVLAKIL   G+ DIKVG  V + VED D    F + +      L   S AD                         +     LSPAARH ++SKGLDAT L G+ KGG++ TKG
Sbjct:   26 SSSLPSHEVVGLPALSPTMESGNIADWKIEEGQAFGPGDVLCEVETDKATVDFEAQDDGVLAKILKPSGSQDIKVGAPVCIVVEDEDDVASFADYNV-----LDDVSSADDETPAVVASSDTVTEAVVTPSPSRDIEDQYILSPAARHLSQSKGLDATVLTGTGKGGRV-TKG 192          
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A7S4SV80_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SV80_9STRA)

HSP 1 Score: 124 bits (310), Expect = 8.340e-29
Identity = 83/214 (38.79%), Postives = 117/214 (54.67%), Query Frame = 0
Query:   41 RAAFACGTFQNSSVSLPSNLQRQHLCPLQAYHFSTDV----PSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTA-DIKVGDAVAVAVEDLD---AYNKFLEADSAGLIKLAAASPADASXXXXXXXXXXXXXXXXXXXXXXXVPGAR-LSPAARHFAESKGLDATGLAGSVKGGKIITKG 245
            R +F     +    ++P++  R  +   + Y  +  V    P +T F MPALSPTME+GTI+ W    G+EF+AGD+LCE+ETDKATV +E Q++GVLAKIL +   A D+ +G  + V VE+ D   A+  F+  D AG     AA+P  A                        V     L P+ARH ++S+G+DAT L GS KGG++ TKG
Sbjct:   74 RRSFQSRAIRREICAVPTS-SRMEIASRRPYSSTASVLSSYPPHTLFPMPALSPTMETGTISKWNKSEGEEFSAGDILCEIETDKATVDFEAQDDGVLAKILREGSNAVDLPIGVPICVVVEEADELAAFKDFVLDDGAG----GAAAPTAAQEEAPAAASAPTPTAQAESVVNRDVADEFVLMPSARHLSQSRGVDATVLVGSGKGGRV-TKG 281          
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A1E7FSH3_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSH3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.210e-27
Identity = 80/186 (43.01%), Postives = 102/186 (54.84%), Query Frame = 0
Query:   71 YHFST-----DVPSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTA-DIKVGDAVAVAVEDLDAYNKF-----LEADSAGLIKLAAASPADASXXXXXXXXXXXXXXXXXXXXXXXVPGARLSPAARHFAESKGLDATGLAGSVKGGKIITKG 245
            +H ST     D P +T    PALSPTME+GTI +W L  G EF+AG VLC +ETDKAT+ YE Q++G +AKIL D   A D+ +G  +A+ VE+L+    F     LE +    +   +AS ADA                             L P+AR  AESKGLDATGL GS KGG++ TKG
Sbjct:   50 FHSSTVVSKDDYPVHTVLPFPALSPTMETGTIANWELSEGDEFSAGSVLCSIETDKATMDYEAQDDGFIAKILRDGPDASDLPIGTPIAIVVEELEDVAAFADYVVLEDEGNAGVGDVSASSADAPIAPTSGSTTAAPVAGGDSGTSF------LLPSARFLAESKGLDATGLKGSGKGGRV-TKG 228          
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Match: A0A6H5KLJ3_9PHAE (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLJ3_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 7.190e-27
Identity = 79/174 (45.40%), Postives = 104/174 (59.77%), Query Frame = 0
Query:   72 HFSTDVPSYTTFEMPALSPTMESGTITSWTLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTADIKVGDAVAVAVEDLDAYNKFLEADSAGLIKLAAASP---ADASXXXXXXXXXXXXXXXXXXXXXXXVPGARLSPAARHFAESKGLDATGLAGSVKGGKII 242
            HFS+ +P +    +PALSPTME+GTIT W +K G  FAAGD++C VETDKATV +E Q+E VLAKIL+  GT D+ VG  + V  E  D    F +  SAG  +   A+P   A A+              XXXXXXXXX       P A+H A+S+G + + +AG+  GG+II
Sbjct:   82 HFSSGLPDHDVVGLPALSPTMETGTITEWLVKEGDAFAAGDIICMVETDKATVDFEAQDEAVLAKILVPAGTPDVAVGTPMMVLTESTDDVAAFADF-SAGAPETETAAPPAAAPAAEVEVSAEPASAAPAXXXXXXXXXXXXXXXXPLAKHLAKSEGYELSAIAGTGPGGRII 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1246.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCE2_9STRA6.230e-3949.09Dihydrolipoamide acetyltransferase component of py... [more]
A0A7S2ALJ9_9STRA6.100e-3648.30Dihydrolipoamide acetyltransferase component of py... [more]
A0A6H5L3X9_9PHAE1.800e-3452.69Dihydrolipoamide acetyltransferase component of py... [more]
A0A812V1C5_SYMMI1.290e-3244.63Dihydrolipoamide acetyltransferase component of py... [more]
A0A7S2R7Y6_9STRA3.550e-3242.93Dihydrolipoamide acetyltransferase component of py... [more]
A0A7S3P4Y1_9STRA2.400e-3046.55Dihydrolipoamide acetyltransferase component of py... [more]
A0A7S2LCD3_9STRA1.060e-2945.66Acetyltransferase component of pyruvate dehydrogen... [more]
A0A7S4SV80_9STRA8.340e-2938.79Acetyltransferase component of pyruvate dehydrogen... [more]
A0A1E7FSH3_9STRA2.210e-2743.01Dihydrolipoamide acetyltransferase component of py... [more]
A0A6H5KLJ3_9PHAE7.190e-2745.40Acetyltransferase component of pyruvate dehydrogen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036625E3-binding domain superfamilyGENE3D4.10.320.10coord: 213..245
e-value: 1.7E-5
score: 26.4
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 82..153
e-value: 2.2E-17
score: 62.6
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 80..156
score: 21.871155
NoneNo IPR availableGENE3D2.40.50.100coord: 76..175
e-value: 1.9E-27
score: 97.1
NoneNo IPR availablePANTHERPTHR23151:SF9DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIALcoord: 57..244
NoneNo IPR availableCDDcd06849lipoyl_domaincoord: 81..154
e-value: 6.07083E-28
score: 99.7863
IPR045257Dihydrolipoamide acetyltransferase/Pyruvate dehydrogenase protein X componentPANTHERPTHR23151DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATEDcoord: 57..244
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 79..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig1246contigH-akashiwo_Contig1246:158600..159668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig1246.2.1mRNA_H-akashiwo_Contig1246.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig1246 158567..159686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig1246.2.1 ID=prot_H-akashiwo_Contig1246.2.1|Name=mRNA_H-akashiwo_Contig1246.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=249bp
MLRVLASQAKGTRSMPQRWAKNNTLQRQKRTLLLVPPKTRRAAFACGTFQ
NSSVSLPSNLQRQHLCPLQAYHFSTDVPSYTTFEMPALSPTMESGTITSW
TLKPGQEFAAGDVLCEVETDKATVSYELQEEGVLAKILIDEGTADIKVGD
AVAVAVEDLDAYNKFLEADSAGLIKLAAASPADASLADAAVPVAEATAAT
AAAAGGGAVPGARLSPAARHFAESKGLDATGLAGSVKGGKIITKGRDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036625E3-bd_dom_sf
IPR000089Biotin_lipoyl
IPR045257E2/Pdx1
IPR011053Single_hybrid_motif