prot_H-akashiwo_Contig99.24.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig99.24.1
Unique Nameprot_H-akashiwo_Contig99.24.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length114
Homology
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BLAST of mRNA_H-akashiwo_Contig99.24.1 vs. uniprot
Match: A0A7S3XNB1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNB1_HETAK)

HSP 1 Score: 220 bits (560), Expect = 3.040e-69
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0 
Query:    1 QVYWYNSATQRHQFDVPPEVEEKMNATNSPQKLGHLRQKASMRLKQVGDWIQYRGAHDKTFYYHETSGDFQWERPAALGPGDPVEAKADDPPGEDNTSHATAGG 104
            QVYWYNSATQRHQFDVPPEVEEKMNATNSPQKLGHLRQKASMRLKQVGDWIQYRGAHDKTFYYHETSGDFQWERPAALGPGDPVEAKADDPPGEDNTSHATAGG
Sbjct:  224 QVYWYNSATQRHQFDVPPEVEEKMNATNSPQKLGHLRQKASMRLKQVGDWIQYRGAHDKTFYYHETSGDFQWERPAALGPGDPVEAKADDPPGEDNTSHATAGG 327
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BLAST of mRNA_H-akashiwo_Contig99.24.1 vs. uniprot
Match: A0A7S2FAD8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FAD8_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.480e-16
Identity = 44/86 (51.16%), Postives = 54/86 (62.79%), Query Frame = 0 
Query:    2 VYWYNSATQRHQFDVPPEVEEKMNATNSPQKLGHLR--QKASMRLKQVGDWIQYRGAHDKTFYYHETSGDFQWERPAALGPGDPVE 85
            V+WYN  TQ  Q+D P EV+   +A     K G     +K SMRLK+V DWI+Y G   KTFYY+ETS +FQWERP  L P +P E
Sbjct:  365 VFWYNHRTQSSQWDKPAEVQVAQDAKQMEAK-GEWENLKKTSMRLKRVSDWIEYHGQGGKTFYYNETSREFQWERPVDLAPPEPKE 449
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig99.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S3XNB1_HETAK3.040e-69100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2FAD8_9STRA1.480e-1651.16Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.20.70.10coord: 1..77
e-value: 1.6E-8
score: 36.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..114
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 50..77
score: 8.669801

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig99contigH-akashiwo_Contig99:1613443..1621021 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig99.24.1mRNA_H-akashiwo_Contig99.24.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig99 1613443..1621021 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig99.24.1 ID=prot_H-akashiwo_Contig99.24.1|Name=mRNA_H-akashiwo_Contig99.24.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=114bp
QVYWYNSATQRHQFDVPPEVEEKMNATNSPQKLGHLRQKASMRLKQVGDW
IQYRGAHDKTFYYHETSGDFQWERPAALGPGDPVEAKADDPPGEDNTSHA
TAGGGAGGEQHPQP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom