mRNA_H-akashiwo_Contig98.16.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: A0A7S3UW32_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UW32_HETAK) HSP 1 Score: 537 bits (1383), Expect = 1.090e-189 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1 Query: 1 QTLAEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGPFAAVFEEVVFAIKDREEGATVRAFREAFTDEE 840 QTLAEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGPFAAVFEEVVFAIKDREEGATVRAFREAFTDEE Sbjct: 158 QTLAEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGPFAAVFEEVVFAIKDREEGATVRAFREAFTDEE 437
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: A0A3M2LU51_9ACTN (TIGR02452 family protein n=1 Tax=Actinomadura harenae TaxID=2483351 RepID=A0A3M2LU51_9ACTN) HSP 1 Score: 212 bits (539), Expect = 2.730e-64 Identity = 139/280 (49.64%), Postives = 169/280 (60.36%), Query Frame = 1 Query: 10 AEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDD-PTLLEFVPWRRHET--TRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAAL---SGPFAAVFEEVVFAIKDREEGAT-----VRAF 816 A +T++ILE Y VDLS L ++VDGT+ H P++ +L +P + TR+ V+ E+T+ A RL +G+ ALNFASAKNPGGGFL GA+AQEE LAR+S L+A A +R YY +R D LYTDH+IYSPGVP FR GALL P A +T+PAPNRG A+ LR RA +VLAAAA HGH R+VLGAWGCGVFRNDP EVA F AAL GPFA FE VV A+ D G+ VRAF Sbjct: 10 ARQTLEILERGGYRAPSGHEVDLSGALRASVDGTVLHRPEELAAMLSLLPPVADDAPRTRVEVTTETTLQAARRLGE-----GDGTEDPLALNFASAKNPGGGFLNGAHAQEEGLARASGLYASQRA--AREYYEVHRELRDPLYTDHMIYSPGVPVFRTDTGALLDEPYSVAFITSPAPNRGATRDDDKLA---ALPGVLRQRALKVLAAAAAHGHRRIVLGAWGCGVFRNDPSEVAEAFAAALRPDGGPFARRFETVVLAVYDTAPGSPRLAPFVRAF 279
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: A0A7U3VLA6_9ACTN (DUF2263 domain-containing protein n=1 Tax=Streptomyces sp. SN-593 TaxID=659352 RepID=A0A7U3VLA6_9ACTN) HSP 1 Score: 209 bits (531), Expect = 4.640e-63 Identity = 136/274 (49.64%), Postives = 168/274 (61.31%), Query Frame = 1 Query: 4 TLAEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLT-APQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGP---FAAVFEEVVFAIKDREEGATVRA 813 ++A E +I+ E Y + VDL+ P+ A DGT + P + + R TR +V+ ES+ +A+ RL AEG VA L+FASA+NPGGG+LRGA AQEEAL R+SAL+ CL AP+ YYA +R D Y+D +I+SPGVP FR GALLARP A + +PAPN GV R P + V AL VRA RVL AA HG+ RLVLGAWGCGVFRNDP VAG F AAL GP FA V +E VFA+ DR + RA Sbjct: 7 SIARENERIVAEGGYTGPDGRRVDLAGPVARAADGTAVYGPGPVAVPDTAS--RGPGTRCAVTPESSTEAVRRLV------AEGEGPVAVLDFASARNPGGGYLRGAQAQEEALCRASALYPCLLRAPE---YYAHHREVRDPFYSDRVIHSPGVPVFRADSGALLARPFTAGFLASPAPNAGVIARTMPERVPE-VGPALAVRAERVLEVAAAHGYRRLVLGAWGCGVFRNDPAVVAGAF-AALLGPGGRFAPVVDEAVFAVLDRRADSPTRA 267
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: E8UB92_DEIML (DUF2263 domain-containing protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) TaxID=709986 RepID=E8UB92_DEIML) HSP 1 Score: 208 bits (530), Expect = 5.480e-63 Identity = 138/276 (50.00%), Postives = 170/276 (61.59%), Query Frame = 1 Query: 10 AEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDP----TLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGPFAAVFEEVVFAIKDREEGA-TVRAFRE 822 A+ET+ IL+ + E VD+ LV+A GT+ + P D T L P R T + V+ E+T+ + L + A+G V ALNFASAKNPGGGF+ G+ AQEE+LAR++ L+ LT P + YY ANR LYTDH++YSPGVP FRD AL A AA VTAPAPN G R+ P + V A LR RA+RVL A A HGH R+VLGAWGCGVFRNDPR VAGVFRA L VFE+V FA+ D GA T R+F+E Sbjct: 10 AQETLHILDTGTFTLGE-RTVDVRAELVAARAGTVLYRPQDEAVLATALRDAPRGR---TLVEVTNETTLAGVRAL----AVGADGE--VGALNFASAKNPGGGFIGGSQAQEESLARATGLYHALTGPVAEAYYTANRACGTALYTDHVLYSPGVPVFRDDADALRADVVRAAFVTAPAPNAGAVARNEPERAGE-VTAVLRARAARVLGAFARHGHRRIVLGAWGCGVFRNDPRVVAGVFRALLDNEARGVFEQVRFAVLDAAPGAPTWRSFQE 274
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: L7UJ20_MYXSD (DUF2263 domain-containing protein n=2 Tax=Myxococcus TaxID=32 RepID=L7UJ20_MYXSD) HSP 1 Score: 208 bits (529), Expect = 6.080e-63 Identity = 141/276 (51.09%), Postives = 168/276 (60.87%), Query Frame = 1 Query: 7 LAEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGPFAAVFEEVVFAIKDRE-EGATVRAFREAFT 831 LA+ET++I EE Y+ V L + + AV+GT+ + P D L VP RI V+ E T A RL EG + +AALNFASAKNPGGGFL GA AQEE LAR SAL+ CL R YY NR LYTDHLIYSP VPFFRD LL P + +V+T PAPN GVA R P G V A LR RA +VL AAA GH LVLGAWGCGVFRN+P EVAG F +AL+ + F VVFA+ +R +G +RAF+E F+ Sbjct: 6 LAQETVRITEEGTYVAPSGRRVVLGDSVARAVEGTVLYRPGDFGPL-VVPEGVPTPPRIEVTGEKTGQAARRLVE------EGETRIAALNFASAKNPGGGFLGGAKAQEEDLARCSALYPCLLT--QREYYDVNRAESSPLYTDHLIYSPDVPFFRDDALELLEEPFLLSVLTMPAPNAGVALRENP-GLRRQVHAVLRARALKVLQAAAREGHRVLVLGAWGCGVFRNEPAEVAGAFSSALA-TLSGAFSRVVFAVYERGGDGPNLRAFQEHFS 270
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: UPI001F42C589 (TIGR02452 family protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F42C589) HSP 1 Score: 208 bits (529), Expect = 6.660e-63 Identity = 139/279 (49.82%), Postives = 170/279 (60.93%), Query Frame = 1 Query: 7 LAEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLL----EFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGPFAAVFEEVVFAIKDRE-EGATVRAFREAF 828 LA E+++I+E Y+ VDL + + AV+GT ++P+D + L +F P R + RI V+ E T A RL EG + VAALNFASA+NPGGGFL GA AQEE LAR SAL+ CL + YYAANR LYTDH+IYSP VPFFRD ALL RP ++VTAPAPN GVA R D + LR RA +VL A HGH+ LVLGAWGCGVFRN+P +VA F AL FE VVFA+ +R +G +RAFR F Sbjct: 6 LARESLRIMEGGTYVAPSGGSVDLRDAVARAVEGTTLYAPEDFSGLRVAGQFEPAR---SPRIEVTAEKTGAAARRLVE-----EEGLTRVAALNFASARNPGGGFLGGAKAQEEDLARCSALYVCLLSQPD--YYAANRAAPSALYTDHVIYSPDVPFFRDESLALLERPFAVSLVTAPAPNAGVARREGA-DSMDRLDGVLRARARKVLQVLAHHGHTTLVLGAWGCGVFRNEPTDVARAFARALES-LPGAFERVVFAVYERGGDGPNLRAFRAYF 272
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: A0A1D8GA77_9ACTN (DUF2263 domain-containing protein n=5 Tax=Streptomyces TaxID=1883 RepID=A0A1D8GA77_9ACTN) HSP 1 Score: 207 bits (526), Expect = 2.130e-62 Identity = 138/277 (49.82%), Postives = 170/277 (61.37%), Query Frame = 1 Query: 7 LAEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGP--FAAVFEEVVFAIKDR-EEGATVRAFREAF 828 +A+ET KI+ Y +VD++E + A++GT H P P E R + R+ V+ ES+ +A RL +A+ S VA LNFASA+NPGGG+L GA AQ EAL R+SALHA L ++ YY +R D YTD +I+SPGVP FRD G LL RP +T+PAPN GV P + AAL RA RVL A HG+ RLVLGAWGCGVFRNDP EVAG FRA L+G FA F+EVVFA+ DR EG T+ AFREAF Sbjct: 11 IAQETEKIVAAGRYRTAAG-VVDIAEQVARALEGTTLHGPG-PVPAEPGTGR---SGRVEVTGESSTEAARRLT-----AADPGSPVAVLNFASARNPGGGYLNGAQAQAEALCRASALHATLL--RAPAYYEHHRADRDPFYTDRVIHSPGVPVFRDDRGRLLDRPFAVGFLTSPAPNAGVVRARTPHLAAR-IPAALASRAERVLETAVAHGYRRLVLGAWGCGVFRNDPAEVAGAFRALLAGEGRFAGHFDEVVFAVLDRTREGRTLAAFREAF 274
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: A0A1D3DM26_9ACTN (TIGR02452 family protein n=1 Tax=Streptomyces thermolilacinus SPC6 TaxID=1306406 RepID=A0A1D3DM26_9ACTN) HSP 1 Score: 206 bits (524), Expect = 3.890e-62 Identity = 142/278 (51.08%), Postives = 170/278 (61.15%), Query Frame = 1 Query: 7 LAEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLT-APQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGP--FAAVFEEVVFAIKDR-EEGATVRAFREAF 828 +A ET +I+ Y E V +++ + AVDGT H PD + P +TRI V+ EST +A RL A+A VAALNFASA+NPGGG+L GA AQEEAL R+SAL+A L AP+ YY +R D LYTD +I+SPGVP FRD G LL RP +T+PAPN GV P D V AAL RA RVL A HG+ R+VLGAWGCGVFRNDP EVAG FRA L+G FA F+EVVF + DR E T+ AFR AF Sbjct: 8 IARETEQIVAAGRYRTPAGE-VRIADLVAKAVDGTTLHGPDP---VPAAPGTGR-STRIEVTGESTTEAARRL-----AAAAPDHSVAALNFASARNPGGGYLNGAQAQEEALCRASALYATLLRAPE---YYDHHRADRDPLYTDRVIHSPGVPVFRDDRGGLLDRPYTVGFLTSPAPNAGVVRARTPERA-DRVPAALASRAERVLETAVAHGYRRIVLGAWGCGVFRNDPAEVAGAFRALLTGDGRFAGHFDEVVFGVLDRTREQHTLGAFRTAF 271
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: A0A3P1T5V4_9ACTN (TIGR02452 family protein n=1 Tax=Arachnia propionica TaxID=1750 RepID=A0A3P1T5V4_9ACTN) HSP 1 Score: 206 bits (523), Expect = 4.870e-62 Identity = 136/277 (49.10%), Postives = 166/277 (59.93%), Query Frame = 1 Query: 10 AEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDD--PTLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGPFAAVFEEVVFAIKDR-EEGATVRAFREAFT 831 A ET+ ILE Y + +VDL E + AV GT+ ++PD P+ P RI V+ E T +A RL++ LNFASAK+PGGGFL GA AQEEALAR SAL+ C+ + R Y NR + D LY+D +I+SP VP RDG G LL P + A++TAPAPN GV P GG D + A LR RA RVLA A HGH LVLGAWGCGVFRNDP EVA VFR L+GPFA F VVFA+ DR + ++ F+E T Sbjct: 12 ARETVTILERGTYTSPNGVVVDLREEIARAVTGTVEYAPDADLPSPAATTP-----RVRIEVTPEGTFEAARRLRDENPV---------VLNFASAKHPGGGFLGGAQAQEEALARDSALYVCI---KDRGMYRINR-SRDTLYSDAMIHSPEVPVIRDGDGTLLDEPWLTAIITAPAPNAGVWLERNP-GGADLLEATLRERARRVLAVAHRHGHDSLVLGAWGCGVFRNDPTEVATVFRDLLAGPFAGAFGHVVFAVLDRTRDQRALKPFQEVLT 269
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Match: A0A1I1ZYB1_9DELT (TIGR02452 family protein n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A1I1ZYB1_9DELT) HSP 1 Score: 205 bits (522), Expect = 7.320e-62 Identity = 137/275 (49.82%), Postives = 168/275 (61.09%), Query Frame = 1 Query: 7 LAEETMKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLLEFVPWRRHETTRISVSLESTVDAIVRLQNLTSASAEGSSCVAALNFASAKNPGGGFLRGANAQEEALARSSALHACLTAPQSRTYYAANRRTHDGLYTDHLIYSPGVPFFRDGGGALLARPAVAAVVTAPAPNRGVAERHFPFGGEDAVAAALRVRASRVLAAAAVHGHSRLVLGAWGCGVFRNDPREVAGVFRAALSGPFAAVFEEVVFAIKDRE-EGATVRAFREAF 828 LA+ET+ I+E +Y ++V ++E + +A GT+ + P D L +P + +I V ++T A +L EG + VAALNFASA+NPGGGFL GA AQEE LAR SAL+ CL ++R YY NR LYTDH+I+SPGVPFFRD LL RP +VTAPAPN G R P G D V+ ALR RA RVL A HG LVLGAWGCGVFRNDP+EVA VF L +A F VVFAI DR E AT++AF F Sbjct: 6 LAKETVAIVERGSYTGPSGQVVSIAEAVAAAQRGTVLYRPRDFDDLP-IPAGSGQGAKIEVWADTTGSAARKLVEQ-----EGVAEVAALNFASARNPGGGFLGGAKAQEEDLARCSALYHCLL--EAREYYDVNRADESVLYTDHVIWSPGVPFFRDERLDLLDRPFHVGIVTAPAPNAGEHLRRQPHGRAD-VSTALRRRAERVLRVLARHGQHTLVLGAWGCGVFRNDPKEVAQVFADLLRTTYARSFARVVFAIYDRSRERATLQAFERVF 271 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig98.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig98.16.1 >prot_H-akashiwo_Contig98.16.1 ID=prot_H-akashiwo_Contig98.16.1|Name=mRNA_H-akashiwo_Contig98.16.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=273bp MKILEEKNYLNQEYEMVDLSEPLVSAVDGTMCHSPDDPTLLEFVPWRRHEback to top mRNA from alignment at H-akashiwo_Contig98:946753..947592+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig98.16.1 ID=mRNA_H-akashiwo_Contig98.16.1|Name=mRNA_H-akashiwo_Contig98.16.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=840bp|location=Sequence derived from alignment at H-akashiwo_Contig98:946753..947592+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig98:946753..947592+ >mRNA_H-akashiwo_Contig98.16.1 ID=mRNA_H-akashiwo_Contig98.16.1|Name=mRNA_H-akashiwo_Contig98.16.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=819bp|location=Sequence derived from alignment at H-akashiwo_Contig98:946753..947592+ (Heterosigma akashiwo CCMP452)back to top |