|
Homology
BLAST of mRNA_H-akashiwo_Contig98.11.1 vs. uniprot
Match: UPI001CBBD3D3 (EF-hand domain-containing protein n=1 Tax=Kangiella taiwanensis TaxID=1079179 RepID=UPI001CBBD3D3) HSP 1 Score: 57.8 bits (138), Expect = 2.220e-8 Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 82 QIQAIYNDLDVNGDNQVTIIEFGELLEELGKELTPEEVAHAFRLLDTDASDYIEFREFLAWWR 270
+I+ +N D + + ++ + EFGELL+ L + E++ F L+DTD S YIEF EFL WW+
Sbjct: 11 EIKEHFNFFDRDNNGRIDVDEFGELLQVLSPDAGDEQIHKGFSLVDTDGSGYIEFEEFLTWWK 73
BLAST of mRNA_H-akashiwo_Contig98.11.1 vs. uniprot
Match: A0A1B3BAD4_9GAMM (Putative signal transduction protein with EFhand domain n=2 Tax=Kangiella sediminilitoris TaxID=1144748 RepID=A0A1B3BAD4_9GAMM) HSP 1 Score: 56.6 bits (135), Expect = 6.210e-8 Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 82 QIQAIYNDLDVNGDNQVTIIEFGELLEELGKELTPEEVAHAFRLLDTDASDYIEFREFLAWWR 270
+I+ ++ D +G+ ++ + EF ELL L E P++ F L+DTD S YIEF EFL+WW+
Sbjct: 11 EIKGHFDFFDSDGNGRIDLDEFTELLVVLSPESNPDQAQEGFALIDTDRSGYIEFDEFLSWWK 73
BLAST of mRNA_H-akashiwo_Contig98.11.1 vs. uniprot
Match: UPI001CBCC680 (EF-hand domain-containing protein n=1 Tax=Kangiella shandongensis TaxID=2763258 RepID=UPI001CBCC680) HSP 1 Score: 55.5 bits (132), Expect = 1.730e-7 Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 70 FSDEQIQAIYN-----DLDVNGDNQVTIIEFGELLEELGKELTPEEVAHAFRLLDTDASDYIEFREFLAWWR 270
+D+Q++ I N D D NG ++ + EF ELL L + PE+ F L+DT+ S YIEF EFL+WW+
Sbjct: 4 LTDKQLEEIQNHFKFFDRDNNG--RIDLEEFAELLAVLSPDSNPEQAKEGFSLIDTNGSGYIEFDEFLSWWK 73
BLAST of mRNA_H-akashiwo_Contig98.11.1 vs. uniprot
Match: D8UDD2_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UDD2_VOLCA) HSP 1 Score: 58.2 bits (139), Expect = 4.180e-7 Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 82 QIQAIYNDLDVNGDNQVTIIEFGELLEELGKELTPEEVAHAFRLLDTDASDYIEFREFLAWWRREK 279
+I +++ DVN D ++ + E +L ++LGKELT +E+ A R+LDT + ++E EF AWW + K
Sbjct: 289 EIAYVFSTYDVNDDYRLELSEVKKLCQDLGKELTEDELKEAMRILDTSKNGFVELDEFCAWWTKAK 354
BLAST of mRNA_H-akashiwo_Contig98.11.1 vs. uniprot
Match: A0A8J4C5P0_9CHLO (Uncharacterized protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4C5P0_9CHLO) HSP 1 Score: 56.6 bits (135), Expect = 1.400e-6 Identity = 25/66 (37.88%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 82 QIQAIYNDLDVNGDNQVTIIEFGELLEELGKELTPEEVAHAFRLLDTDASDYIEFREFLAWWRREK 279
+I +++ DVN D ++ + E L ++LGK+LT +E+ A R+LDT + ++E EF AWW + K
Sbjct: 274 EIAYVFSTYDVNDDYRLELSEVKRLCQDLGKDLTDDELKEALRILDTSKNGFVELDEFCAWWTKTK 339
BLAST of mRNA_H-akashiwo_Contig98.11.1 vs. uniprot
Match: UPI000424B726 (EF-hand domain-containing protein n=1 Tax=Rheinheimera baltica TaxID=67576 RepID=UPI000424B726) HSP 1 Score: 48.5 bits (114), Expect = 8.210e-5 Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 1
Query: 70 FSDEQIQAIYNDLDV---NGDNQVTIIEFGELLEELGKELTPEEVAHAFRLLDTDASDYIEFREFLAWWR 270
S++Q+ AI +D D +G+ Q+ I EF ELL L + V F+L+DT+ + F EFL WW+
Sbjct: 6 LSEQQLAAIKSDFDFFDRDGNGQIDIAEFIELLTALAPKTKVSHVDEGFKLIDTNNDGFXXFAEFLTWWQ 75
BLAST of mRNA_H-akashiwo_Contig98.11.1 vs. uniprot
Match: A0A4R5HG83_9ALTE (EF-hand domain-containing protein n=1 Tax=Alteromonadaceae bacterium M269 TaxID=2546219 RepID=A0A4R5HG83_9ALTE) HSP 1 Score: 48.5 bits (114), Expect = 8.400e-5 Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 1
Query: 79 EQIQAIYNDLDVNGDNQVTIIEFGELLEELGKELTPEEVAHAFRLLDTDASDYIEFREFLAWWR 270
EQI+ + D +G+ Q+ + EF ELL L + + V AF L+DT+ +IEF EF AWW+
Sbjct: 13 EQIREEFAFFDQDGNGQIDMGEFIELLTVLSPKTKAKVVEEAFALIDTNQDGFIEFDEFAAWWQ 76
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Seed ortholog | 3067.XP_002956688.1 |
PFAMs | EF-hand_7 |
Model size | 444 |
Max annot lvl | 3041|Chlorophyta |
Hectar predicted targeting category | other localisation |
Exons | 4 |
Evalue | 2.35e-08 |
EggNOG OGs | 2E21W@1|root,2S9AT@2759|Eukaryota,3804N@33090|Viridiplantae,34M4S@3041|Chlorophyta |
Description | EF-hand domain pair |
Cds size | 336 |
COG category | P |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681388065.8705351-UTR-H-akashiwo_Contig98:709186..709204 | 1681388065.8705351-UTR-H-akashiwo_Contig98:709186..709204 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig98 709187..709204 + |
1681388065.9262924-UTR-H-akashiwo_Contig98:725597..725687 | 1681388065.9262924-UTR-H-akashiwo_Contig98:725597..725687 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig98 725598..725687 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681388065.8810463-CDS-H-akashiwo_Contig98:709204..709228 | 1681388065.8810463-CDS-H-akashiwo_Contig98:709204..709228 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig98 709205..709228 + |
1681388065.894712-CDS-H-akashiwo_Contig98:717540..717667 | 1681388065.894712-CDS-H-akashiwo_Contig98:717540..717667 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig98 717541..717667 + |
1681388065.9074123-CDS-H-akashiwo_Contig98:719749..719892 | 1681388065.9074123-CDS-H-akashiwo_Contig98:719749..719892 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig98 719750..719892 + |
1681388065.9167242-CDS-H-akashiwo_Contig98:725555..725597 | 1681388065.9167242-CDS-H-akashiwo_Contig98:725555..725597 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig98 725556..725597 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig98.11.1 >prot_H-akashiwo_Contig98.11.1 ID=prot_H-akashiwo_Contig98.11.1|Name=mRNA_H-akashiwo_Contig98.11.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=112bp
MVDQLMGKGGERAEQSDFSDEQIQAIYNDLDVNGDNQVTIIEFGELLEEL GKELTPEEVAHAFRLLDTDASDYIEFREFLAWWRREKDSLPNSRRISMED GILDESPSRRK* back to topmRNA from alignment at H-akashiwo_Contig98:709187..725687+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig98.11.1 ID=mRNA_H-akashiwo_Contig98.11.1|Name=mRNA_H-akashiwo_Contig98.11.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=16501bp|location=Sequence derived from alignment at H-akashiwo_Contig98:709187..725687+ (Heterosigma akashiwo CCMP452) AAGGAGCAGCTCAGCCACATGGTCGACCAGCTCATGGGCAAGGTGGGAGG
CCGGGCGGGCGGGCGGGCGGGTGGGCGGGCGGGCAGTCCTCCTCCCCCCC
CCGTACTATGCCAAACCCCGCCGGAAAAACGGCCGTGCGCTGCTCCGGAG
GAGCCTCCGCTTTTCGGCCTAAGACCCACCCATCCCGGTCCCAGGCCGGA
AGCGCGGGTGCTCCGGAGCACCGCTTCCTCCACTGCTTTTGGAGCTCTTC
TTTGTGTGCGTATGCCTCCTCTTTGTTTGCGAGCTGGAGCACGCACGGCG
TGGAATGGGTGTACTACTTGAGTAGTACCATGCAACGGCCAGGAGTGGTG
GACTGGCGGTTGTTGGTCCCAGAGAATGCAGCTGAGAGGGAATTTGGGTT
CATTTGGAGTAAGGAGAGTTGATATGATATGTTTGGCAGTGCTGGGCTGG
TGGTGGTGGGGATCGGGTGATCCGGAGCACGAGGTCGATATAGAGTGAGA
GGGTGATCCGGAAGAAGGGGTTGAGAGAGGGTGAGCGGGTGATCTGGAGC
ACGAGGCCCAGAGAGAGTGAGCGGGTGATCCGAAACACGAGGTGGAGAAA
AGGCTAGTGGGTGATCCGGAGCACGCAGTGGATGGGGGTTTAGTGGTGGG
TGCTCCGGAGCACCCGCACTTCCGACTTGGGACCGGGATGGGTGGGTTTT
AGGCTGAAAAGCGGATGCTCCAAAGCATACGGCTGTTTTTTTTCCGGTGG
GGTTTTGCATGTTGCCCCTCCCCCCCCGGGGCCGACCGGGCAAGGGGATA
TGTAGCGGAGCGTTTGTGTGGGTGGGTGTGGGTGCTGGGTGTGCGTGTCG
AGCCCTCCTGAAAGCTCTCAGCAGCGCTAAGTCCGCGCGCACTTTTTGTT
TTTCATCAGGTTTAGTAGGGAGGGAATAATTGTGGGCAGGAAAGCGGCAG
GTGTGGGGGGGTGGGGGGTGTCCTCATCACCCAATCCTGCCACGGCCGCT
GTAATGGTTGTTGTTGACGTGAGTGGGGTTGGCGCCAATCGCGCCAAACT
ATTTTTTTTTTTAGGATCAGAGAGGTCTGATGATCCCACCAACGGTTGCT
ACATACTTGACTCATTTCTGATAGACCTGTCAAAAGCATGGGTTGTGCAA
AAAAGGAGGTGCAAAAAAGGAAGCAGATGTGCATTGCCACTATAAAGTGT
GTAACACCATTTTTTTTTTATGTTTTTTGGCTTGTCTCTGATAAGACCAT
CATTGGGTGTTGTGTTGTCTCTGATAAGTCTATCATCATCGAGTATTGTG
TTGTTCTACTTGACTTAACCCTTTTAGACAAATTTTTTTTTGGGCAAGTC
ATATTGGTATATACCAATATGACTTCGCAATTTTAATTGGTCAAAGTGTA
ACCGTCGATATGCGTGTTGATTTGGATTGGTATTTCAATTTCCGTGAAGT
CATTTCGGGGAAACTCCGGGGCCATATTGGTTTAAACCAATATGGCTCTC
AATCGTGTGACTGAAGTGACCCTTTCAGTCCTATTTCCTGTGGTAGGAAG
TAGTACCAGTCCTACTCTTCTCCTCGGATTCAATGTGGACCCATTACTTG
CGAAAATGGAATTCAATTTCTCCTCCTCCTCTTCTTcCGGAAAAAACGtA
CGTGTGATGATGTCGTTGAACCAATCAAAATCAAACGTTTGAAAAAAGAT
CACGAACCGAACAAACACGGAGAACAGATTCACAACAACAAGAAGAAGTA
CAATCTGCTACACCTAGTACCTGGCTATCATAGGCTGTATCTATCAGATA
ACTCCCAGGAGGCTTGAACCAAAAACTATACAGAGCAAAACATTTTACCA
TTCCTATCTGAAGCCAAGTAAAAACATGCATGGATTACTTCCCAAAGTCC
CAAAAGTCAGAAATATTGTTCATTTTCACTAATATACACAGCCATTGAAA
CAGTACACCGCTGCACTCAGAATATACAAGCAAGGGAGCAGAGCTATCAA
GGCGGTGAAAGCATCCAAAACGATCAAACAATTATAGAAGTATGTCCGAT
AAAATAATTATGTACCGGATGACGATTGGATTTTTCATTAGGTTCTCGAA
TTCTATTCGCCTATTTATCCAGTTTTAAAAGTTTGAAATCATTGCGATTC
TCCGTATTTTCATTGGAGAATCTAGTTTTGTAACGGTCGGTTGAGTCATA
TTGGTATATACCAATATGACTTTTATTCTTGTCTAAAAGGGTTAATCCTT
AACGGAAGGGACACATCCAGCCCTAGATCAAGCAAAATCATCTCACTACC
ATCACTGAAACAGGAGGTTAGAAATTTAGAAAGCTTTTAAAAACATAGCC
ACACCACAGTATAATAATTTAAAAAACATAGCCACACTACAACACTCCCA
CACTTCTTTTTAGAATTATTAGAAGCAATTTTGAGTAAATATTAGTATGA
TCATCTAGAGGCCCCGGTCAATGGACCGCAGGCCGGGGGGGGGGTGCACT
TCTGCCCGCAACACGAGACAGGGGGAGAGGAGTTGGTTTTGCCGGTATGG
CCTACGATGTGCACACATGCACAGGGTTCTAGGGTCGGCCAGGGTGCGAT
GCTGGCACGACGCTGAGGGGAGGGAGTGTCCTAGTCTGCAGGTGTGCACA
TTTGAGCATTGGCCACCGGTCAATACTTCACAGCTACCCTGGGTTTAAAT
GTGGATATAAGTGCGATGGCTTGCAACAAAGGAGTGGGAGTTGGGGGAGG
GGGGAGATACGGGATATATCAGCATGGACAGTTTTTGGGGGGCTTTGTTT
GTGGCAGCAGAGATCAGGCGTGGTGGATATCAGGGCCAGTTGGGGGCCCA
GGATGGAGGAAACTTGACGCTGTGGTAATGCAAAGAAGGTGAGGTCTCCC
TGGGTTTACAGGTTTTGGGGCTGTCAGGACGACGCCAGGAACTGTCAGAG
CTGGGGCACGGGCTGGGCGCAAGCTTAGGGGCAATAAAGCTCGTCAAAGG
TTGCGCCGGAGGAGGGGGTCGGATCAAGGAAGGGCTCATTCTTCAGATCA
AAAGCGAGCTGCTAGCGCCATGGAGCAACAACAGCATCCTTCTCGTGCTG
CTGCTGCTGCTGAAGTTGACGCTGGTGCTGCTGCTGTTGCTGGGCAGTAG
CAGCAGCACGAAGGCAGGGAGGCACAGCACGAAGGGCAACAGCATGAGGG
GCAACAACATGAGGGGGAGGGGGGGGGGGAATAGAGCAGCCTCATGAATC
TTCGGCATTTCTGGACCAAGGTCGGCGAATCATCTTCACCAACTTGGACT
TCAACGGGGAAAAGGCGAAGTGGGAAGAATTGCAGCCACCGCCAATTGGT
GGGAGTGGGGGCCAGGGAGAAAGTCAGGAGGAAATGTCCGGAGCTGGAGA
AAGGCCGACACAACAGGAAGGGAAACTGATTGGGGAAAGCAACGGGCCAG
AGGGGGGTGATTCGCCAATGAGAATGGCAGGTGGAGCTGGGAAGAATAGA
GAGGGGGGGAAGAACACAAGCTGCTGCTGCGCGGGAAGAAACGAGCTACA
ACTGCGCAGCAAGGGGAATTTTGAGGACACAGAGGAAGTAGGGGAAAATT
CTTCTTCTTCTTTGTCGTCATCGGAATCGTCAAGTAGTGGGGAAAAAACG
GAACTTGGATCTGAGGAAGAGTCAGGAGGGGAGTGCAGCGACACAGCCCA
TGGAAAAAGAAGTGAATGGGCAATAAGTGGCGCTGGGGAAGTGAAAGGGG
AAGAGAGGGATTTGAGAGGGATCTGAGCTGGTTTAAGGGCAAGCGAGCCG
TCGGCTTGCAAAGATATAGAGCGCCAGAGGAAAATAGAACGGGAACAGGG
TGAGCGAGAAGCTGAGGCAGAGAAGGAGGCAAGACAGGACCGTTTGCTTC
AGCACCAGGCTATTGCTAGGGCAGCAAAGGAGCGCCGGGATGCAGAGGCC
AGGAGGGCAGCCAAGGAAGGGGCGGTGGAGTTGTGCAAGGGGGCTAGATT
GGCTGGGAGAAGAGGGGGACAGCGGGGACGTAGGAGATCGGCTCGTGGAA
ATAGAGGAGCTTGGAGAGGGGGTGCTGCTGGATGGAATCTTCCCTTGGTG
TTCATTCTCGGCCACCCATATGGTATGAGCTGAGGTGGCTTGTGGGAAAT
GCGGCATCATCAAGCACACGCAGAGGTGCGCCAGGCAATGCCCGGTGGGA
GTTTGCCATGTTTGCTGCCGCCGCCAGGGGCGGCGTGGGGTAGGGGGTTT
CAGCGTGGAGGAGGAGTGGGCCTTCTTCGTGAAGATGTCGAAGCCTTGGC
AGCTCTCGGAAGAGCAACTTGAGTTCGCGTGAGCAGATTGGAAGAGCCAG
TTGGGGCTTTAAGCTGTTTGGCACCGCCTGAGCTTGGCGGTGTGTGTGCT
GGGCGGCTGTCATTTCTGCAGTGGGTTATGTACATTGGGGGGAAACTGGC
AAATGGGAAGGTGTGCAGTCGGAATCAATGCAGGCTGGCATCTTAAGTTT
TGGTGATGAACCAGAGAATGAGTAGTGGGATTTAGAAGTGGAAGGGTCCG
TGTATGGAGGCTGGGGCTTCGGTCCTTGTAGTTATCCAAAAGGCTGGACC
TTAAATAAATTAAAAGCATCATCATCATCATCATCATCCCAGCCACACTA
CAATATAATACCAGGCCATCAACACTGGCAAAGAACCATGGTTTCAGCTA
ATAAAATAAAGATCAGGCACAAGCCTTGGCTGGTGCTTGCTTGGTATTAG
CCACAGCAATGGCCTTTTGCAGTGATGGCCTGGCATTATACTGTAGTTTA
CATATAGCTATTATATTTTTTGATAAAGCTTTTTCTAAATTATTCCCAAC
CTCCTGTTTCTGTGATGGTAGTAAGGTGATTATTGCTTGATCTAGCTAGG
GCTGGATGTGTGCCTTCTGTTAACCCTCTTACTGGATTTATTTTTTTGGA
GGCTATGAACGGATCGCTTGTTCCGGAGCGTTCCGTACTCACATCTGTTT
GGTGTAATCCGGCTTTTTGTTGAGACAATTCCCTTACTCTCCGCCAAACG
GGTATAAACCCGTTTAGCTCTTTGGCCGACAGTGAAGTGTTTGTAAGATT
CTCCTGTTGTACTTGTATTTATTGTTGTAGTAATAAGATGAAGCACAGAA
CCCCTTTTTGATGAATTTAGCATAAGGAAATACAAAAAAAAATTCTGAGT
CGAATCCATGTACGCGCTAACAAGTTTTTCCTCGAATCAAAATATTTTGG
AGAGTTTTTCAAAACCAATCAAAATCAAATTCGAATTGACATTCAACACG
ACAAAGAAAGAGCAGCAAGAGGTAACACAGAGCACAACGGAGCAAGCTTG
TACCCTACACAACAAGAGCAAAATAATCAGCTTACTTTAACCTTTTTGTG
AATCAAAAGGCCCTTACTGGACAAGCTTTTTAAAATACCAATGGTCCAAA
ATACTGGTAAAAGAATATGTAATGTAAAGCTTGTGAATTGTTACACCGTT
GCAACCAGTAGATGCAGAGAAGGAGTATAAGGGAGATCACAGGCTTTACA
GCGCTCATTACAATGAGACGATTATAGAGGCAAGGGCCATAAAACAATGA
CGTTTACGGTATACGAAAAGGTTGAATATCGAATAATTCTCAATTTTGAT
TGGATCTTTCGTTAAAGGTTGAACAACACAATTTTGTAATCATTTTTCTT
TCTTTTTCTACGCTTTGGCAGTTGACTGACACAATATATTGCCAATCGCG
ATAACGTGTTTGTTTTCTCAAGAACTAGCCCCACAATAACAAAGTATACT
CGGATGTGATGGCACCGAGAAATATGCAAGAAGTTCTCTTCTAGAACTGT
CTGTAGTGGTCAAATTCTATTGCATGGTTGAGCTTTGATGTATTGGGCAA
CTCATCTTCAGCCAGGTGTTGCAGAAGTTTCACTCTGGTCAATCAGTTTT
GAATTTCTTGATGATTGCTGGAGGAGATGAGGGTTCTACAATGTTCTTGA
TTGGAATATTTCCTTCTTTTCCTCTTGTTGGTAGTTTTTTTTATTTGGAC
TTCAACAATATAGCAGCAGCAGCAGCAATAGCGACCAATGATTTTTTTTT
TGTACTTTCACATATGGCCAATGCCCAAGTTAAAAGAAAAAAAAATGTGA
TTTTTCCTCTGCTGAAGCAGCACGACAGCGCTTTGTACCAGTTTAATGTA
CTCTTTCCCTGATCTGGACAGATGGCTTGGATTGCCCAACCAAAATGGGA
ACCGCACACAACGTTGCCATCATGTACTTCTAGCCATCATGGCCCATGAG
TGCACAGTTGTCTTGTTGGAGGGAGGTATCCTTCTATGAACTGCTGTTGG
AGAACGGCATACCTAAGATCGCTCCATAATGATGAAATGTAGCAGGCAGG
CAATGATGCCCAGTCTGGCACCATGACATATATATTTCTGAATCCTTCTT
TTAGAATGTATATAGCCTTCAATAAACGCTGTACTCTGCAACGTGTGGGT
GCTTTATGTTTAACCAACTTGGATTTCTTGGGTGGCATAAAAACTTTTTG
TTCATCATGCGTGTTTATTCTCCTGTGCCGTAGAATTCCAATGGTTTCAA
TATTAGATCTATATGATTTAGCACTTGCTGACTCAATGACGACTCATTGA
TGAATAGACTCAAGCTCAGATCGCTTCTTGATATTACCAGTTAACTAAGT
ATTCACTCAGGAAAGCTTGCTTTTGCTTGGGCAATCGACTTCACCCGCTC
TAGTTTGATTTTGTTTACCCTTAACAAGTCTCTCTGTAATAGATGACGAA
TCTTCAGCATTTTGATTAGCACCATTATGGAGTATATTTCTTTGTCTGGT
GGTCAAAGTTCAACAAGGAGCTGATGGTTCATTCCTCGATCCTAGCTGGT
TTTACTGAGCTTCAAAGAGTAGAGGATGATTGTTACTGCTCTTGCCCAGC
CTCTCCTGTTTGCTTTTCTTTTTTTCTTCTATTTTTTTTTTCTTCCTTAT
TCAGCAGTCGCATCATTTTGTGGCGCTGCGATAAGATTTAGCACATCAGC
CATGCAACAGTGCAACAGTCATTTCCCCCTCTTCTCCTCCTTTGTCGTAT
TTAATTATTATAATCGGAATATCCTTAATTGAGGATAAAATTGATTAAAA
AGGCAGCATTGCACTTTGAACTATGGGAGTGTTCATCTAACTAGACTGTC
TAATTTCTATAGCTGCAACAGGTGCGTGGGACCACCTACGCTATACTGAG
AAGGCTTGCTTGATACACTTGCTATCTCCCTGGTTGCAACCTTACCTTGG
CTATTCTCGCTCACTTCTGGCTATTTTTCCGACCCCAGCTATTTTTGCTG
CTACATTTTGCATTTGACTTTGAACAGTGAGGTCATGTCTGCTGCCCTGG
TTCCAAGCAACAAACACTGGCTATTTTGCTGAGCAATTTTTGCCGAAACA
TTTTCCTTTTGAATTGGACTTTGAATTGAGATGCTTAATGTCCGACCATT
CCTGCTTCCGAGCGAAGCTACAAGCAAGAACAATGTCCTGACAACAACAA
AGATATGCCGTTGCCGCCTTGCTGCGCCTTGCTGCTCTGGTCTGGTAGCT
CAGCATCTATAAAATTATGGAAGATCGCTATCCACTGCAGAAAAACATTG
CAGTGACTCAGCAATCGTGGAGGTATGTTGCAGAATTTCAAAAATGATTT
AAATATTATTGACTCTACAACTCAGCACCACTGGTTGTGACTCAATGGTG
AATAGACACAAGCTCAGATTGCTTCTTGAAATTTCTTCTTTCGTCTATTT
GTACTTCGCCAAAAAAGCGCACACATATTCTTTTTGTGCTTGATCACAAG
GACAATCTGCTATACGAAGATCCCTAGGCACCTTTTTAAAGGGAAAGGCT
TATAAGTATATGATGTAGTGGGAGTGAGTGGTAAATTTTGATTCTTGATC
ATAGGGACAATCTGCCATACAAACGGCCCTACGCCACCATTTTTGAGGGG
GGAAACAGGTGTATGATGTAATAGGAATGGTGTTGGTGCAGGTTTAGCTG
CCTCAGGGGGGTTCTGCCCCCTCCACAAGTGAGTGCATTACCGACCTTTA
TTAAAAGCTCAACTCATCATCATCATCACTATCATTACACTCCCCATGAA
AATATACAAATCTCTTGCCCCCCTTTGCCTCTTACATTATTTTTGATTTT
TGTTGACACTTTGTATCGTCCCAAATGCCACTTCTTCTTCTCGGTCGTGT
TTCTGTCTCTAGGGCAATGGAACGCACTTCCCCCATCCTTCCTACCTATA
CAAGCATCGACACAGCTTCCCCACCATGTGCTGCTGCTGCTACGGCCACA
ACAGGGAGGGGAACGCGCGGAGCAGAGCGACTTCTCCGACGAGCAGATCC
AGGCCATCTACAACGACCTGGACGTGAACGGCGACAATCAGGTCACCATC
ATCGAGTTCGGCGAGCTGCTGGAAGAGCTGGGTGAGACCTCATCATCGTA
CCGCGACGACTGCACACAGCAGCATCTGTATATATGGAGTGCAATTACTT
CTATATTTTTGATCATGCAGTGTGCTCCTATCACATCCCGAGGTATTACA
CGTGCCATGGCATGTGAACACTTTGTTATATGTGCTTCAACATGCCACCG
GGAAATCCAAGCTGGAAAAGCCGGTCGAAGCCTCTTTGACGAAGGCAGGG
ACCCGATTGAAACACCGACGGCAGATGGCCGCCGCCGCTCCCTTCATCGG
GAGGAGCAAAAGGCGCCCCCCACCCCCGGGGGATTGTGTATGTCTACAGG
TTAAGCATGTCTACAGTAAAGCCCCTCGCCGTCCTCACTGGCTGCCCTGC
CACACTGAGGTCCTTGCCCGCGGACTGTTCAAAGAGGCGTGGGGCTTCTT
CACGGAGGACTAGCTATCAAAGCGTGCCTTGCGCCTCTGTTGTTGAGAGG
CACGCCAACCTACCAGCAGACAAGAGAAGAAGAACTTGCCCTGGGGCCTA
TGAGGAGATGGGAGCAACCGCCCTCTTGGGTGGAGATATCTACCTGTTTG
AAAGAAAGAAGCACAAATAATTAATCCTTGACAACAAGTCCTTCACATCC
AACCACTCCTGCCAGAAGAACGACAACTGATTCCGTCTTTTGTTTTATTT
ATCTTAAACGTAAAAACAAAACTATAGTAATACTATGATGTGCGGACCAA
TAACATATATTATGTTGCAGGGTGTTGGGTTTAAACAGAAAAACCGCTTC
CATCATCATTGAGTATAGCTCCATATTGCCTTGAAGGCGAAATGTCAAAG
GTTTTAAAATCATTATGACTCCATGACAACTATGCTGCATTTCGACTAAT
AAAAGCCACGGCCGGTGGCTCTGCTCCTTCTCCCACCGGCCTTCAGGCTG
CCTCTGAGTGAATGATAAACCAAATGAAGATGGGCAGCGAATGTAAGAAG
AAGATGGAGTGCTAAAAAAAATGAAAGCAGTGCCGGTAGACGGGCTACCA
CCACCACTAATTCATCCTTGCTGCATGCGCCCCAGCTGTTAATTGAAAAC
AACAACATACTTTTAAAGGAAACATTCTGCCCTCCTTCTTCTCCATGTTC
ACAACTAACCTGAGCATCATCATCATAACCGGCACAAGTGCCGGCCATGA
GCCACAGACGAAATCCATGATCTGAAGATGTGAACTAGTGTCCCAAAGCT
AAGCTCAACCGTTCTTTGAGTAGATGTCTGGATCTGCAAGTAGAATTGGG
ACCAATTGGGACTAGCTATTTCGCCTTCCTCCAGTGTACCGCCCGAGACT
GGTGCCCCCCGCACGAGTGTGGGGTTATCTCGGTTGACAAAACCCCATGA
TGAGCGGAAGAGTACTCATCACCGTCGGTGCTGTCCGTTGTTCTGTCCAG
GGGTGATTCATGACCACCATCGTAAACGACAGTGGCTTCATCCAGGAAAG
ACATAGCACGCGAGGACGCCACTCACTCCTTCTGGTCACTGTGCTCCACC
GAGGTGTCAGCAGTGACAAAACTCGCCTCAAAGATCACCCAGTCCATCAC
AAGCAGGGGCGGCCCACAAAACGGGAAGTTTTAATCGTTTGCACAGCAAG
CAGGGACGAAAAATCTGGTTCTGAATGTGTACGATACCTCAGACCAGATC
CTTTTGGGACAGACAAAAGAATTGCAGGGTGTTGGGTTTAAACAGAAAAA
CCGATTCCATCATCAGGGAGCTAACTTCTTGTGAGAGACCCGTCTCCTCA
CTCCCCCCCCCCACAGGATCATAATCATTCGGTGCCGTTACCAGTCCTGC
ACCCCTGGATGCTGTTGTTGCGTTATTCCAACTCAGGGCGTGCCGTTCCG
CTGTCTCGCTACCTACTCTCACTAGTCCTGTGCCCTTTGATGCAATAACG
TTCTCCCTGCCAAGAGCTTCCTCCGTTCCGCCGTCTCGCTATGTACACAC
CGTCGCCAGTCCTGTGCCCCTTGATGCGGTTGCATTCTTCCGACTCAGCA
GGGCTGGCGTCGCCCCGCCCGCCTGCCTGCGTTGTCCGCCCCTGCTGTTC
GCCGGCACAACAGGCAAGGAGCTGACCCCCGAGGAGGTGGCGCACGCCTT
CCGGCTGCTGGACACGGACGCCTCGGACTACATTGAGTTCCGCGAGTTCC
TCGCCTGGTGGCGCCGCGAGAAGGACTCGCTGCCCAACAGCCGACGCATC
AGCATGGTGGGTGGGGCAGGCCGGTCTCCCCCCCTCCCTTCCCCCTCGCC
TCACCCCCCATTGTTGTGCTCCTGCCCCTGCGGTCGTGCCACCACCATCA
TCATCAACGACTACTGCGGACTGCGGCCAAAATGAAAACTAGGAAGAAGG
AAGGCTGAGGAAGAAGGCGGCGAAGGAAGACGATACAGAACACGAAAACG
ATCACTTTCCCTCAACAAGGTGTAGAATATAAAATATACATACATATTGA
GATTGTGGCGCCAGAATTGGATTCTTGAGAATAATCAATGACAGATTGAT
AAGGACACTTTGTTGGATGATAAAAGTGTCCTTATCACTCTGTCATTGAT
TATAAATATACCCAGTCCGTTAAAAAGGTCCCAATATATCAGGAGCCACT
CGCTCGACAACAGCAGCAGTGATGGAAACAACAAGGGTCCCTCCCTGTAT
CAGGAGCCACTCACTCTACAACAGCAGATTTACATGTCCTTTCCGGAAAT
ATACACACATCGATTGTCGAAGCACCATAAAATAAGAGCGAAGAACATGA
GAACAATGACAAGGAAAAACAAGCAGAAACGAAAGAAAGAAACACAGAAG
AAGTAAGAAGCAGTTGACCGTTGACCGTTTGTCGTTGCTAGGGTCCAAAA
GTAGACGGCAACGACTTGCCATTTCCCCCGAAAAAATCAGAGAGTGGAAA
AAGAGGCTGATTTCCTCATCGAGTATGGCCGGAACGAGGAAAACCCTCCT
CCAAAGATCTTCAGATTCTCCGTCTGTTTTTTTTTGTAATTGGTTTCACT
TTCTCCCGCAGAGCAAAGTGGGTCACTCTGCGTAAAAAATTTGGCAAAGT
GGGATCCGTATCCAAAAAGACTACCTGGTGCGCTCTGACGGGTCAAAACG
TGCATCCAAAAAGAAGCTTAACATTTCAAAATCGTTTATTTTTTACATCT
GGTGAATTACTTTTCCCAAACTGCAAACGAGTGTATAGATTCAAGATGTG
AAAGACGTTTTATTAAAAAAAAAAAAAAAAAACTGCTCTCTCATGCGACC
TACCGCCTGCATGCCTGCATACATTTTTTTTTTTTTTTTTTTTTTTTTTT
GTGTCTACGCAGTACCACCATGCTGTTGATGTTGCGGCCAGTCCCCATAT
CCTTGACAGTCAGTGTTTCTTTCGCGGTCATTGACCGAGATCGCATCGAT
CCGATACTTGCGGGATGATTCCCATCAGGCGTGGCGCATTTCCAGGTCTG
AGGCCGCTCTGGTCCGTGTTCATTCTTGTCTCACGTTGATATTCCCCCAC
CAATCTCTCAGTATTTCGTGTTTCGAATTTCGAAGCGTGATTCGCGATTT
TGATCCATTTCGGCACACCTAACTGTCGCCAATTCGGCAAGCGCTGGGTA
TCGATCCTGCACCTCTCGCTTCGAAGTCGACTTCCGAAGGGTTGAGCTAT
TCCGGGTTAAATATACATTGGCAGTACACCTCCCAGTTACTTTGTGCTGC
AGAGTGTGATATGTCCTTGTTTCTTAACATTACCTGCCAGACTTTAATTT
AGCAATTGGAACATCCCTGCAACAACAAACTAATACGAGAAAAGGCACCT
TGGAGAAGAGGTAGAATGTTGTGCATTTTGTCTCCTCTTGGGAGATATAC
AGTATTATCCGAACGTCTTGTATTAAAATTTGGCCATGTTTTATGAAACT
CTAAAAATTTCAGCACTTCTTCACACTACTTTTTTCTTTTTATGAAAAAA
GATGAAAAAAAGATGGCAGAGAGGTGCAAAGAAGGAGCCTGTCACAAATA
GGCTTTGTTTTTGTGGAAAATTTATCATTCTTTTGAGATTTTGCCTGGAA
TCTGGAAATTACAAAATCCCCCAAAATCTCAGCATTTTCGAGAAATTCCC
GCTGGCTGAAAGTTGTTTGCATGCTGTTTCATTCTTCGGGACATCCGGTG
ACATGATGAGCTGGCGGAACCCCACCCCCTCCAAGGTCACAAGCTTGGTG
CTTTACATTTGGATTACTTTGATTTGGTGCCTGGTTTGGCTCTCATTGTC
ATTTGTTCAGTCTTTTTTACAGTGCGCGTTCTCGTTGGCCACCAGCACTC
GTTGGCTCGTTGGCCAGGGTCTAATCTTTTTGATTTGCCGATCCTGGGCA
AATCAAGTTCAGTGCTGCTTTTCTTGCTTGCCGTTGGGTCAGTGCCTCTG
TTTTTTTTGCATGATTGTCAGTTTTGGCAACGGTTTTTGTGCTTGCTTCT
AGCAGCAGAAGGAGGAGGGTCTCCTGTTTGGGCTGTTGTTTCTAAGAGTG
CCGATGATGTTTGTTGATTGCTTTTAGTAGTAGCTGGCTGCTAGTAGTAG
CTTCTATATACATTCCCACTGATATTTTGGACAACAGTTGTACTGACCAT
GGCTTTTTTCAGCCGAAACCGGTCTGCAACAGTCCTTTTAAAAATATTGG
AATCTCACATTATATATAGTTTCATGATGTTATATTTCATGCGCTATAGC
AGTTATTTTGGCCTTGGCCTTACTTTGATGCTGTGTCCGTGAAGCATTAT
ACTGTGCCAACATCTTCCTTTTGGAATATCCTATGCCCTGATCGATGGTC
TTATTAATCAACTCCACAAAAAGACTTTAGAATTTCGGAGATCCCTACCA
GCACTGCACAAAATTTGTCCGGCCTCATTTCATTTGAGGCCGAACAACGA
GCATAGAGAATTTTCAATCAACTGCTGCCTCCTGCCTCTTGAATTCTTCT
TCTTCTTCTTTGCAGCAATTTAGCCACGTGGGGCTATCCTCACTGATGGC
GGAAGCGGCTTGGAAGCATCTTCTACTTCAAACCCAACACCTTCACAAAT
ACACTTCTTCTATACTCATTTATTTATTTTTTTGTCAGCGTTTAAGCACA
AAGTGAAGAAGAAGAACAGTTCAGATATAGGCTGTTGCTAACTCTGCTCA
TGTCATTTGCATTTTCCCTCCCTGTCTTCATTCCTTCCTTCCTTCCTTCC
TTCCTTCCTTCCTTTCTTTCCTTCCATTTTTCTTCTTTTTCTTCTGAACC
TTATGCTGTGCCTGTAAACATATGTGATGTTGGAGCTGCTTTCTGAATGG
GATGAATCCCTCTATTATGTGCTGCTGTGCTATTGGAGGAGAGCTTCAAC
CATGGCTAAGGCTGTTCCAAATCTCTGGGATTCTTTTCTGCACAGCTCCT
TCTGCTATATTACATGTGACTAGCGAGCGGCTGTCCATGAGCATAAATGG
CTGTCCATGAGCATAAATCTGAAAAAACATATATGCCTCATTTGGCCGCT
AGCGTAAGAGCGGCCCGAGGACGGTGTTGAGTCCATGAGCCAACCAGACA
TTCAAAAGCTGGTGGAAAAAGTGGAAAGCCAATATCCTTCCCAGGGAAGA
CTTTCCAGCTCCAGAGGACTGGTGAAGAGCGAAAGTGGGATCCCCAATTT
TCAGTACTTATACAAAATATTCTGAATTCTTCAGTCCAGCGAATGTGTTC
TGCTATATTCTGTGTTACAGCCGTCACCTCACAGCCAAAATCTCGCCCCA
CAACAAGCCCTTTAATAGTGCCCCCCCCCCAATGCAAGTCTTCCTGAGCA
CCAAAAACACCAAAAAAGACAAATCTGGTACTTTTACCATTCTTTGTAGA
CCCTCCTTGAAAAAAAAAAAAAGAAGTGCCCCCAACTTCTTTTCAGCACC
TCACGATTTTTTTGTCAAGGCAGCCCAGCTGGGAGACTGGGGGTCAGGCC
AAGTGGTCAGCCCCCAAAGTAACGAGTAGATCTTTTATGAGTGGATTAAT
GTAGAAATAGGGAATAGGTAGTTGGTAATTATGAGAAAGGGAAACATGGT
TCACAGCACGTGGTCTATGAACAGCATCAGCATGGTAACATACAGGGATG
GTTGTTGCCAGCATATAGCAGCAGAGCAGCTGTCAAATGGGTGACGGCCA
GCATAGTTGTTGTTGTGTACGTCAGCCACACATCATCATCAAGTCATCAG
GTTTTGTTCACTCTCTAAAAGTGTGCGGGTTGCTTACAACAAACCAACTG
CTGTGTTGCTGTGTGAGCAGACGATGCCAACAAAACACCGCTCCACCACA
GCGGACAGGTGAGCACAGCAGCACAGTAGTAGGAGAAAAGAAATCCCCAC
CATTGGGCAAAGCTGAAGCTGTGTGAATAAGAGCTCCACCAGAAAGAAAG
CTCCACCAGAAGTTGAACTCCACCAGAAATGGAATATCACCATAAAGAAA
AAGCCCCACCAGAAGTGGAACTCCACCAATTCATTTACCGTTATTTAGAG
GCAGGTAGTTGCCCCATCTATATGCCCCATCTATATATCTAAACTGCCCA
AGAGGGTCAGGGTGCCCCAAATGCTAAGTTGAATCAAAGCACAGAGGGAA
GAGAGTAACAGCCTTTATAGAAGGTTTTAGCAGCAGCATAAACTCAATCG
AAAACCAGTGCATCAAGAGTCTCCAGGCCCTGGCAGCAGGGGGTAGTGTC
TCTGCCCCCACCGTTGATTCCAGTGCTGAGTAAACGAACGTGGCAGAGAG
AGTCAAGAGCTTACAGAACGCGGTTCAGAAAAATGTGCTAATCAATTTAT
CCAGAAGGGAGGAATGAAAATCTGTTTGAGTCACCAAATGATGAAGGAGG
AGGAGAAGAGCCGTCGCCGTCGTCATCGTCGTTATCATCATCATGTCCAA
GAACAGTTCATAATCATGTTCAAAAACAGTTAGACAAGAGCAGAAGAGTC
AGAGTCCCAAGAAGAACACGAGCCATCCAGGCAGTCGGTCGATTGAAACG
ATGGTGACTCTAGCCCAGGGCCACCCACTCCAGAAGTTGACGCAGAGTCA
GACCAGCAGGTGAGCAGCAGAATTGACCTTCGAGAGTCTCCACAAGTCCC
AGTTTGATGTAGATCGACGGGCAGAGATCTTGATCGAAACTCCATCCAGC
GGGTCGCCGAGCGTACGCAGAGGCGATACGATCAGTGGTTGCCCATAACC
GATGTTTTTTGTCAACACAGCCCAGCAGGGAGACTGGGGGCCAGGCCAAG
TGGCCAGCCCCCAAAGTAACGAGTAGATCTTTTATGAGTGGATTAATGTA
GAAAAAGGGAACAGGCAATTGGTAATTATGAGAAAGGGAAACATAGTTCA
CAGCATGTGGTCTATGAACAGCATCAGCATGGCAACATACAAGGATGGTT
GTTGCCAGCATAGCAGCAGAGCAGCTGTCACAAATGGGTGGCTGTTGTGT
ACGTCAGCCACACATCATCATCAAGTCATCAGGTTTTGTTCACTCTCTGA
AAGTGTGCGGTTGCTTACAACAAACCAACTGCTGTGTTGCTGTGTGAGCG
GACGATGCCAACAAAACAACGCATTATTTCTATGCCCCAAGATCCATTCC
AATCCACTTGTGACCGTAAATTTGAGAAGGCTGTGTGTGTGCGTGTGTTT
CTGATCCTAGTATATGTAAAAACAAAAAACAAGGTGTGTAGTATGGTGCA
AAGATTTGAAATGAAAGCAGTGGTGAGGTGGAGTACAATATGCATGTATA
ATTAAAAAATCAAAAGCAGTGTTTTTTCACAACCATTGCAACTACTAATG
CTCATAAAATTCAATAAAAGTGTGTTGTTCTTCTTGTTGGTACTCGTTTG
CTTCAATTTCGTTTTGCAGGAGGACGGGATCCTGGATGAGAGCCCTTCAA
GAAGAAAGTAGCAGTTGTTCGAAGAGAAAATAATGCACACTCCTTCCTTA
ATTAATACTTTTCTTACTCATCGTCATGTTGAACTATAAATAAACTAGTA
A back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig98:709187..725687+ >mRNA_H-akashiwo_Contig98.11.1 ID=mRNA_H-akashiwo_Contig98.11.1|Name=mRNA_H-akashiwo_Contig98.11.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=336bp|location=Sequence derived from alignment at H-akashiwo_Contig98:709187..725687+ (Heterosigma akashiwo CCMP452) ATGGTCGACCAGCTCATGGGCAAGGGAGGGGAACGCGCGGAGCAGAGCGA CTTCTCCGACGAGCAGATCCAGGCCATCTACAACGACCTGGACGTGAACG GCGACAATCAGGTCACCATCATCGAGTTCGGCGAGCTGCTGGAAGAGCTG GGCAAGGAGCTGACCCCCGAGGAGGTGGCGCACGCCTTCCGGCTGCTGGA CACGGACGCCTCGGACTACATTGAGTTCCGCGAGTTCCTCGCCTGGTGGC GCCGCGAGAAGGACTCGCTGCCCAACAGCCGACGCATCAGCATGGAGGAC GGGATCCTGGATGAGAGCCCTTCAAGAAGAAAGTAG back to top
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