mRNA_H-akashiwo_Contig978.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A7S3XVA0_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVA0_HETAK) HSP 1 Score: 242 bits (618), Expect = 1.840e-75 Identity = 113/160 (70.62%), Postives = 135/160 (84.38%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRM 480 + ++LLKQGVI ESSS FNAPIV+V KK+G+ RMCLDLR LN IT +KFPLPT REMFD LA ++YF+S+DMLWAYWS+PLRE D+ KTAFT+RN+KY + VMCFGLTNAPATFSHLVNKVFQG +FALCFLDDVL +S + F+ HL +L +IFKRM Sbjct: 116 ITEDLLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRM 275
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A7S3XV63_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV63_HETAK) HSP 1 Score: 242 bits (618), Expect = 1.120e-73 Identity = 113/160 (70.62%), Postives = 135/160 (84.38%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRM 480 + ++LLKQGVI ESSS FNAPIV+V KK+G+ RMCLDLR LN IT +KFPLPT REMFD LA ++YF+S+DMLWAYWS+PLRE D+ KTAFT+RN+KY + VMCFGLTNAPATFSHLVNKVFQG +FALCFLDDVL +S + F+ HL +L +IFKRM Sbjct: 116 ITEDLLKQGVISESSSNFNAPIVMVAKKSGETRMCLDLRALNAITTPSKFPLPTAREMFDNLAEAYYFTSLDMLWAYWSVPLREGDKSKTAFTVRNRKYAFNVMCFGLTNAPATFSHLVNKVFQGCQYEFALCFLDDVLCYSPRNFTLHLYHLSQIFKRM 275
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A7S3XU57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU57_HETAK) HSP 1 Score: 225 bits (573), Expect = 8.450e-71 Identity = 104/138 (75.36%), Postives = 120/138 (86.96%), Query Frame = 1 Query: 70 LVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRMI 483 +V+KKTG+ RMCLDLR LN IT AKFPLPT REMFDQL G++YFSS+DMLWAYWS+PLR+ D+HKTAFT+RNKKY + VMCFGLTNAPATFSHLVNKVFQG +DFALCFLDDVL ++G +FS HL LE+IF RMI Sbjct: 1 MVKKKTGETRMCLDLRSLNAITTPAKFPLPTPREMFDQLEGAYYFSSLDMLWAYWSVPLRDEDKHKTAFTVRNKKYAFNVMCFGLTNAPATFSHLVNKVFQGCQHDFALCFLDDVLCYTGPDFSLHLRQLEEIFIRMI 138
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A392P4D4_9FABA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392P4D4_9FABA) HSP 1 Score: 153 bits (387), Expect = 8.710e-44 Identity = 78/158 (49.37%), Postives = 103/158 (65.19%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFK 474 MV E+L+QG+I+ S+S F++PI+LV+KK G R C D R LN IT K FP+PT E+ D+L G+ YFS +D+ Y I ++ DRHKTAF + Y W VM FGLTNAPATF L+NK+FQ F L F DD+L +S S HL +LE + + Sbjct: 53 MVQEMLQQGIIQPSNSPFSSPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELYGAKYFSKLDLRSGYHQILVQPDDRHKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQTALRKFVLVFFDDILVYSSSWIS-HLSHLETVLQ 209
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A392PP11_9FABA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PP11_9FABA) HSP 1 Score: 151 bits (381), Expect = 1.340e-43 Identity = 75/160 (46.88%), Postives = 104/160 (65.00%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRM 480 MV ++L+QG+I+ S+S F++PI+LV+KK G R C D R LN IT K FP+PT E+ D+L G+ YFS +D+ Y I ++ DR KTAF + Y W VM FGLTNAPATF L+NK+FQ F L F DD+L +S + HL++LE + + + Sbjct: 1 MVQDMLEQGIIQPSNSPFSSPILLVKKKDGSWRFCTDYRALNTITVKDSFPMPTVDELLDELYGAMYFSKLDLRSGYHQILVKPEDRCKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQSALRKFVLVFFDDILVYS-TSWREHLIHLESVLQTL 159
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A4Y2J202_ARAVE (Retrovirus-related Pol polyprotein from transposon 297 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2J202_ARAVE) HSP 1 Score: 149 bits (377), Expect = 7.780e-42 Identity = 72/160 (45.00%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRM 480 +V+E+++ G+IEESS + +PIVLV+KK G R C+D R LN+ITKK +PLP + D L GS +F+++D+ YW + +R DR KTAFT + ++VM FGL NAPATF L+ V +G +++ L +LDD++ G+ F HL NL K+F+R+ Sbjct: 32 LVNEMVENGIIEESSGPWASPIVLVKKKDGSTRFCVDYRKLNEITKKDSYPLPRIDDTLDSLNGSQWFTTLDLKSGYWQVEIRPEDREKTAFTTGQGLWQFKVMPFGLCNAPATFERLMETVLRGLSSEACLIYLDDIII-VGQTFEEHLNNLRKVFQRL 190
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A392NWR2_9FABA (Transposon Tf2-1 polyprotein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NWR2_9FABA) HSP 1 Score: 150 bits (379), Expect = 8.750e-42 Identity = 75/160 (46.88%), Postives = 103/160 (64.38%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRM 480 MV ++L+QG+I+ S+S F++PI+LV+KK G R C D R LN IT K FP+PT E+ D+L G+ YFS +D+ Y I ++ DR KTAF Y W VM FGLTNAPATF L+NK+FQ F L F DD+L +S + HL++LE + + + Sbjct: 130 MVQDMLEQGIIQPSNSPFSSPILLVKKKDGSWRFCTDYRALNAITVKDSFPMPTVDELLDELYGAKYFSKLDLRSGYHQILVKPEDRCKTAFRTHQGHYEWLVMPFGLTNAPATFQCLMNKIFQSALRKFVLVFFDDILVYSAS-WREHLIHLESVLQTL 288
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A147BJ05_IXORI (RNA-directed DNA polymerase (Fragment) n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A147BJ05_IXORI) HSP 1 Score: 158 bits (399), Expect = 9.210e-42 Identity = 77/160 (48.12%), Postives = 105/160 (65.62%), Query Frame = 1 Query: 1 MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRM 480 MV +L+QGVIE + S +++P+ LV+KK G R C+D R LN++TKK FPLP T ++ D LAG +FS++D+ YW +P+ DR KTAFT + Y +RVM FGL NAPATF L+ V G L +LDD++ GK FS HL NLE++F R+ Sbjct: 187 MVKTMLEQGVIEPACSPWSSPVTLVKKKDGSTRFCVDYRRLNEVTKKDSFPLPRTDDILDALAGCTWFSTLDLKSGYWQVPVHPGDREKTAFTTGSGSYQFRVMPFGLCNAPATFQRLMESVLNGLIGTICLVYLDDIVVF-GKTFSDHLANLERVFARL 345
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A392NAX4_9FABA (Transposon Tf2-1 polyprotein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NAX4_9FABA) HSP 1 Score: 149 bits (377), Expect = 1.540e-41 Identity = 74/154 (48.05%), Postives = 102/154 (66.23%), Query Frame = 1 Query: 13 LLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFK 474 +L+QG+I+ S+S F++PI+LV+KK G R C D R LNQ+T K FP+PT E+ D+L G+ YFS +D+ Y I ++ TD +KTAF + Y W VM FGLTNAPATF L+NK+FQ F L F DD+L +S + THL +LE + + Sbjct: 1 MLQQGIIKPSTSPFSSPIILVKKKDGSWRFCTDYRALNQVTIKDSFPMPTVDELLDELFGAQYFSKLDLRSGYHQILIKPTDCYKTAFRTHHGHYEWLVMPFGLTNAPATFQCLMNKIFQSALRKFVLVFFDDILIYS-PSWQTHLTHLEWVLQ 153
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Match: A0A267FX25_9PLAT (Uncharacterized protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FX25_9PLAT) HSP 1 Score: 156 bits (395), Expect = 3.270e-41 Identity = 76/159 (47.80%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 4 VDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFPLPTTREMFDQLAGSWYFSSMDMLWAYWSIPLRETDRHKTAFTLRNKKYCWRVMCFGLTNAPATFSHLVNKVFQGYNNDFALCFLDDVLAHSGKEFSTHLLNLEKIFKRM 480 V +LL+ +IE S SE++ PIVL +KK+G+ R C D R LN TKK FPLP +E + LAG+ YFS++DM+ AYWS+ +RETDR K AF + + W+V+ FG+TN PA F ++ K+ Y FAL +LDDV+ +G+ F L NLE IF R+ Sbjct: 363 VQQLLEHDLIEPSESEWSCPIVLARKKSGEFRFCCDFRQLNNKTKKDSFPLPLIQESLESLAGNMYFSTLDMVGAYWSVKVRETDREKLAFRTHDGLFQWKVLPFGVTNGPACFQRIMQKILGDYAYKFALLYLDDVIC-TGRNFEEMLRNLELIFSRL 520 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig978.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig978.1.1 >prot_H-akashiwo_Contig978.1.1 ID=prot_H-akashiwo_Contig978.1.1|Name=mRNA_H-akashiwo_Contig978.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=161bp MVDELLKQGVIEESSSEFNAPIVLVQKKTGDLRMCLDLRCLNQITKKAKFback to top mRNA from alignment at H-akashiwo_Contig978:5518..6000+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig978.1.1 ID=mRNA_H-akashiwo_Contig978.1.1|Name=mRNA_H-akashiwo_Contig978.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=483bp|location=Sequence derived from alignment at H-akashiwo_Contig978:5518..6000+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig978:5518..6000+ >mRNA_H-akashiwo_Contig978.1.1 ID=mRNA_H-akashiwo_Contig978.1.1|Name=mRNA_H-akashiwo_Contig978.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=483bp|location=Sequence derived from alignment at H-akashiwo_Contig978:5518..6000+ (Heterosigma akashiwo CCMP452)back to top |