mRNA_H-akashiwo_Contig965.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A359M0Z4_9BACT (ATP-dependent helicase n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A359M0Z4_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 4.500e-9 Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 46 LQANF---GILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 LQAN G LTPT VQA A+ PAL GRDV A TG+GKTLAFLLP+ Sbjct: 12 LQANLARHGFLTPTPVQAEAIPPALEGRDVVATAQTGTGKTLAFLLPI 59
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A533BLG2_9BACT (ATP-dependent RNA helicase n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A533BLG2_9BACT) HSP 1 Score: 58.5 bits (140), Expect = 1.580e-8 Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 SF LG++D +L +L A G+L PTS+QA A+ PAL GRDV A TG+GKT AFL+P+ Sbjct: 8 SFHTLGLSD-LLLRDLTAA-GLLVPTSIQAQAIPPALEGRDVIGCAQTGTGKTAAFLIPM 65
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A0G0YKN0_9BACT (DEAD/DEAH box helicase domain protein n=2 Tax=Parcubacteria group TaxID=1794811 RepID=A0A0G0YKN0_9BACT) HSP 1 Score: 57.8 bits (138), Expect = 2.960e-8 Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 +F EL + + ANF +TPT +QA AL+PALAGRD+ A TG+GKTLAF++P+ Sbjct: 15 TFTELPINTLMKKNLSDANF--ITPTPIQAEALKPALAGRDILGTAQTGTGKTLAFIIPI 72
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A521TKU8_9CHLR (DEAD/DEAH box helicase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A521TKU8_9CHLR) HSP 1 Score: 57.8 bits (138), Expect = 2.990e-8 Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 SF+ +GV + L + A G+ TPT +QA A+ P LAG+D+ +A TGSGKT+AFL PL Sbjct: 54 SFESIGVPAD--LRAVLAERGVATPTPIQAAAIAPLLAGKDIIGQARTGSGKTIAFLAPL 111
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: S9PJV3_9DELT (ATP-dependent RNA helicase RhlE n=3 Tax=Cystobacter TaxID=42 RepID=S9PJV3_9DELT) HSP 1 Score: 57.8 bits (138), Expect = 2.990e-8 Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 SF+ LG++DE + +A F +PT +QA A+ PALAGRDV A TG+GKT A+LLPL Sbjct: 4 SFKTLGLSDESLDAVRRARFA--SPTPIQAQAIPPALAGRDVIGCAATGTGKTAAYLLPL 61
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A535PWI1_9CHLR (DEAD/DEAH box helicase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535PWI1_9CHLR) HSP 1 Score: 57.4 bits (137), Expect = 4.040e-8 Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 SF + GV + A GI P VQA A+ P LAGRDV I+A TGSGKTLAFL+P+ Sbjct: 3 SFADAGVRPHTLA--ALAALGITEPVPVQAQAIPPLLAGRDVVIEAPTGSGKTLAFLIPM 60
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A7V2HKY1_9BACT (DEAD/DEAH box helicase n=1 Tax=Bryobacteraceae bacterium TaxID=2212468 RepID=A0A7V2HKY1_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 5.530e-8 Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 1 Query: 52 ANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 A G PT VQA A+ PALAGRDV A TG+GKTLAFLLP+ Sbjct: 18 ARHGFQVPTPVQAQAIPPALAGRDVVATAQTGTGKTLAFLLPI 60
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: H8MSJ2_CORCM (ATP-dependent RNA helicase n=26 Tax=Myxococcaceae TaxID=31 RepID=H8MSJ2_CORCM) HSP 1 Score: 57.0 bits (136), Expect = 5.540e-8 Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 SF+ LG++ E + +A FG TPT +QA A+ PAL+GRDV A TG+GKT A+LLP+ Sbjct: 4 SFKSLGLSPETLGAVKRARFG--TPTPIQAQAIPPALSGRDVIGCAATGTGKTAAYLLPM 61
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: A0A2M9N6W2_9BACL (DEAD-box ATP-dependent RNA helicase CshA n=23 Tax=Paenibacillus TaxID=44249 RepID=A0A2M9N6W2_9BACL) HSP 1 Score: 57.0 bits (136), Expect = 5.560e-8 Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 +F LG+ ++ L + FGI+TP+ VQA A+ P L G+DV + TG+GKTLA+LLP+ Sbjct: 5 TFHTLGIAED--LSSRLTEFGIVTPSPVQAEAIPPILEGKDVLATSQTGTGKTLAYLLPV 62
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Match: V9GD14_9BACL (ATP-dependent RNA helicase YfmL n=1 Tax=Paenibacillus sp. JCM 10914 TaxID=1236974 RepID=V9GD14_9BACL) HSP 1 Score: 56.2 bits (134), Expect = 1.020e-7 Identity = 28/60 (46.67%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 1 SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSGKTLAFLLPL 180 +F LG+ ++ L A FGI+TP+ VQ+ A+ P L G+DV + TG+GKTLA+LLP+ Sbjct: 5 TFHTLGIAED--LSARLAEFGIVTPSPVQSEAIPPILEGKDVLATSQTGTGKTLAYLLPV 62 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig965.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig965.3.1 >prot_H-akashiwo_Contig965.3.1 ID=prot_H-akashiwo_Contig965.3.1|Name=mRNA_H-akashiwo_Contig965.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=60bp SFQELGVTDEQILHNLQANFGILTPTSVQANALRPALAGRDVTIKAYTGSback to top mRNA from alignment at H-akashiwo_Contig965:216730..217689+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig965.3.1 ID=mRNA_H-akashiwo_Contig965.3.1|Name=mRNA_H-akashiwo_Contig965.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=960bp|location=Sequence derived from alignment at H-akashiwo_Contig965:216730..217689+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig965:216730..217689+ >mRNA_H-akashiwo_Contig965.3.1 ID=mRNA_H-akashiwo_Contig965.3.1|Name=mRNA_H-akashiwo_Contig965.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=180bp|location=Sequence derived from alignment at H-akashiwo_Contig965:216730..217689+ (Heterosigma akashiwo CCMP452)back to top |