prot_H-akashiwo_Contig964.3.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig964.3.1
Unique Nameprot_H-akashiwo_Contig964.3.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length200
Homology
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6V1SSI1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SSI1_HETAK)

HSP 1 Score: 377 bits (969), Expect = 9.850e-131
Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 0
Query:    1 MAGLTSETASPNKSQQKPSRPTKREPSTNHAVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK 200
            MAGLTSETASPNKSQQKPSRPTKREPSTNHAVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSS+NIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK
Sbjct:    1 MAGLTSETASPNKSQQKPSRPTKREPSTNHAVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSQNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK 200          
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A7S3XU04_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU04_HETAK)

HSP 1 Score: 193 bits (490), Expect = 5.620e-58
Identity = 103/174 (59.20%), Postives = 140/174 (80.46%), Query Frame = 0
Query:   29 NHAVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISK-GELLASFSA-SGDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK 200
            +H V++ PGS+++       P SA+++LRAKVLRQ+EYWLSDD LKKD+ IL+KM  GW+PIS IA+ K+++RLN S++FIADSLRSS+ ++IVS+DG QLRRRVPFSMEK LSAD RT+VV++LPDNIS+ G+L+  FS+ SG+++H+ IV+AK + PS RKG K P  V+ K
Sbjct:   28 HHQVNNTPGSATV------VPSSADENLRAKVLRQIEYWLSDDQLKKDDDILQKMLGGWIPISHIAKLKRIERLNLSIDFIADSLRSST-DLIVSEDGTQLRRRVPFSMEKVLSADFRTVVVKYLPDNISEVGQLMTGFSSRSGEVDHVKIVKAKTICPSYRKGQKTPFAVHMK 194          
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A7S3XTY5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTY5_HETAK)

HSP 1 Score: 178 bits (451), Expect = 5.210e-52
Identity = 92/156 (58.97%), Postives = 123/156 (78.85%), Query Frame = 0
Query:   49 PLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISK-GELLASFSAS---GDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK 200
            P  A+D LRAKVLRQ+EYWLSDD LKKD+ ILKKM+ GW+PI  +A+ KQ++RLN S++FIADSLRSS+ +++VS+DG +++RRVPF    ++  D RT+VVR+LPDNIS+ G+L+ SFS S    ++EH+ IV+AK V PS RKG KPP PV+ K
Sbjct:   47 PSLADDSLRAKVLRQIEYWLSDDQLKKDDYILKKMRGGWIPIRHLAKLKQIQRLNLSIDFIADSLRSST-DLVVSEDGTEIQRRVPFERFSSMEKDFRTLVVRYLPDNISEEGQLMTSFSTSHNSSEVEHVKIVKAKTVCPSHRKGQKPPFPVHMK 201          
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: D7TK39_VITVI (Uncharacterized protein n=5 Tax=Vitis TaxID=3603 RepID=D7TK39_VITVI)

HSP 1 Score: 89.0 bits (219), Expect = 1.550e-17
Identity = 51/138 (36.96%), Postives = 90/138 (65.22%), Query Frame = 0
Query:   48 TPLSAND-----DLRAKVLRQVEYWLSDDYLKKDE---TILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHI 177
            T LSAND     D+R K+++QVEY+ SD+ L  D+    +LKK K+G++PI+ IA  ++MK+L   ++ I  +LR SS+ ++VS DG++++R  P S+ +   + + T+++ +LP++ S   +   F A+G+I+ I I
Sbjct:   27 THLSANDALLADDIRGKIIKQVEYYFSDENLPTDKYLMNLLKKDKNGFVPIAVIASFRKMKKLTQDIQLIVAALRESSQ-LVVSSDGKKVKRLHPLSLTEVKDSKICTVLIENLPEDHSTENIQRIFGAAGNIKKICI 163          
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6P6ABY5_DURZI (la-related protein 6C-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6ABY5_DURZI)

HSP 1 Score: 89.4 bits (220), Expect = 2.070e-17
Identity = 52/139 (37.41%), Postives = 88/139 (63.31%), Query Frame = 0
Query:   54 DDLRAKVLRQVEYWLSDDYLKKDETILKKMKS---GWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRK 189
            DDLR K+++QVEY  SD  L  +E++ K++     G++PIS I   K++K L  + + +A +LRSSS+ ++VSDDG+++RR+ PF+ ++      RT+VV +LP++ S   L   F+  G +++I I   ++  PS  K
Sbjct:  116 DDLRQKIIKQVEYQFSDMSLLSNESLSKQINKDPEGYVPISFITSTKKIKSLITNNQLLAQALRSSSK-LVVSDDGKKVRRKHPFTEKEREEVQSRTVVVENLPEDHSHQNLDKIFNVVGSVKNIRICHPQESNPSRSK 253          
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A0J8B5P1_BETVV (Uncharacterized protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B5P1_BETVV)

HSP 1 Score: 86.7 bits (213), Expect = 1.050e-16
Identity = 53/150 (35.33%), Postives = 93/150 (62.00%), Query Frame = 0
Query:   31 AVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKS---GWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHI 177
            A+ S P S    RL   + +S++ DLRAK+++QVEY+ SD+ L  D+ ++K++K    G++ IS IA  ++MKRL      I DSL+ SS+ +++S DG++++R  P   ++    ++ T+VV +LP++ S   +   F  +G I++I I
Sbjct:   22 ALHSPPPSDDDARLSIESAVSSDVDLRAKIIKQVEYYFSDENLPDDKFLMKQVKKDKEGFVSISLIASFRKMKRLTKDSSLIIDSLKESSQ-LVISSDGKKVKRLHPLPSKEDKGPELCTVVVANLPEDHSVQNIQKIFGLAGSIKNISI 170          
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A835RDY1_VANPL (HTH La-type RNA-binding domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RDY1_VANPL)

HSP 1 Score: 85.9 bits (211), Expect = 1.510e-16
Identity = 49/128 (38.28%), Postives = 84/128 (65.62%), Query Frame = 0
Query:   53 NDDLRAKVLRQVEYWLSDDYLKKDETILKKM---KSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHI 177
            +DDLR K++RQVEY+ SD+ L  D+ +LK+M   K G++PI+ I+  ++MK+L      I  +LR+S+  ++VS DG+ ++R  P  + +   + +RTI+V +LP++ S+  +L  F A G+IE + I
Sbjct:   77 SDDLRDKIVRQVEYYFSDENLPNDKFLLKQMRKDKEGYVPIAIISSFRKMKKLAKDSSLIEAALRTST-ILVVSSDGKMVKRMHPLPISEPKDSKLRTILVENLPEDHSEENILRIFGAIGNIEEMTI 203          
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6A2XN62_HIBSY (La-related protein 6C n=6 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XN62_HIBSY)

HSP 1 Score: 87.0 bits (214), Expect = 1.520e-16
Identity = 51/139 (36.69%), Postives = 88/139 (63.31%), Query Frame = 0
Query:   54 DDLRAKVLRQVEYWLSDDYLKKDETILKKMKS---GWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRK 189
            DDLR K+++QVEY  SD  L  +E++ K++     G++P+S IA  K++K L  + + +A +LRSSS+ ++VSDDG+++RR+ PF+ ++      RT+VV +LP++ S   L   F+  G +++I I   ++   S  K
Sbjct:  139 DDLRQKIIKQVEYQFSDMSLIANESLSKQISKDPEGYVPVSFIASTKKIKSLITNHQLLAQALRSSSK-LVVSDDGKKIRRKHPFTEKEREQVQSRTVVVENLPEDHSHQNLDKIFNVVGSVKNIRICHPQESNSSRSK 276          
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6A3AX56_HIBSY (Pentatricopeptide repeat-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AX56_HIBSY)

HSP 1 Score: 86.3 bits (212), Expect = 1.740e-16
Identity = 59/166 (35.54%), Postives = 98/166 (59.04%), Query Frame = 0
Query:   33 DSEPGSSSICRLLPATPLSA-------NDDLRAKVLRQVEYWLSDDYLKKDETILKKMK---SGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSR 188
            D EP +  IC    + P+ +       N+DLR ++++QVEY LSD  L  +E+  K++     G++PIS IA  K++K L A+ + +A  L  SS N++VSD+G+++RR+ PF+ ++      RT+VV +LPD+ S   L   F   G +++I I   ++ + SSR
Sbjct:   72 DQEPATYMICNRNLSIPMPSFSSRNVLNNDLRQEIIKQVEYLLSDMSLIANESFSKQISRDPEGFVPISFIASTKKIKSLIANQQLLAQILTFSS-NLVVSDNGKKVRRKHPFTEKEREEVQSRTVVVENLPDDHSHQNLDKIFDVVGSVKNIRICRPQE-FNSSR 235          
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6J1D5P1_MOMCH (la-related protein 6C n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D5P1_MOMCH)

HSP 1 Score: 86.7 bits (213), Expect = 1.910e-16
Identity = 54/141 (38.30%), Postives = 84/141 (59.57%), Query Frame = 0
Query:   53 NDDLRAKVLRQVEYWLSDDYLKKDETILK---KMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRKG 190
            +DD++ K+++QVEY  SD  L  +E++ K   K   G++PIS I+  K++K L+ +   I  +LRSSSR ++VS DG+++RR+ PF+ +       RT+VV +LPDN S   L   FS  G ++ I I    +  P   KG
Sbjct:  111 SDDIQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSR-LVVSSDGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICHPPESNPCCSKG 250          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1SSI1_HETAK9.850e-13199.50Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3XU04_HETAK5.620e-5859.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3XTY5_HETAK5.210e-5258.97Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
D7TK39_VITVI1.550e-1736.96Uncharacterized protein n=5 Tax=Vitis TaxID=3603 R... [more]
A0A6P6ABY5_DURZI2.070e-1737.41la-related protein 6C-like n=1 Tax=Durio zibethinu... [more]
A0A0J8B5P1_BETVV1.050e-1635.33Uncharacterized protein n=1 Tax=Beta vulgaris subs... [more]
A0A835RDY1_VANPL1.510e-1638.28HTH La-type RNA-binding domain-containing protein ... [more]
A0A6A2XN62_HIBSY1.520e-1636.69La-related protein 6C n=6 Tax=Hibiscus syriacus Ta... [more]
A0A6A3AX56_HIBSY1.740e-1635.54Pentatricopeptide repeat-containing protein n=2 Ta... [more]
A0A6J1D5P1_MOMCH1.910e-1638.30la-related protein 6C n=1 Tax=Momordica charantia ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006630La-type HTH domainSMARTSM00715lacoord: 54..132
e-value: 3.2E-13
score: 59.9
IPR006630La-type HTH domainPFAMPF05383Lacoord: 60..114
e-value: 6.4E-13
score: 48.5
IPR006630La-type HTH domainPROSITEPS50961HTH_LAcoord: 50..139
score: 17.25354
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 49..136
e-value: 1.9E-19
score: 71.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availablePANTHERPTHR22792:SF102LA-RELATED PROTEIN 6Acoord: 40..193
NoneNo IPR availableCDDcd07323LAMcoord: 57..131
e-value: 2.32452E-20
score: 79.1129
IPR045180La domain containing proteinPANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 40..193
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 49..136
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 123..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig964contigH-akashiwo_Contig964:50573..51172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig964.3.1mRNA_H-akashiwo_Contig964.3.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig964 50545..51172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig964.3.1 ID=prot_H-akashiwo_Contig964.3.1|Name=mRNA_H-akashiwo_Contig964.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=200bp
MAGLTSETASPNKSQQKPSRPTKREPSTNHAVDSEPGSSSICRLLPATPL
SANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMK
RLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVV
RHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006630La_HTH
IPR036388WH-like_DNA-bd_sf
IPR045180La_dom_prot
IPR036390WH_DNA-bd_sf
IPR035979RBD_domain_sf