mRNA_H-akashiwo_Contig964.3.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6V1SSI1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SSI1_HETAK) HSP 1 Score: 377 bits (969), Expect = 1.420e-130 Identity = 199/200 (99.50%), Postives = 200/200 (100.00%), Query Frame = 2 Query: 29 MAGLTSETASPNKSQQKPSRPTKREPSTNHAVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK 628 MAGLTSETASPNKSQQKPSRPTKREPSTNHAVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSS+NIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK Sbjct: 1 MAGLTSETASPNKSQQKPSRPTKREPSTNHAVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSQNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK 200
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A7S3XU04_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU04_HETAK) HSP 1 Score: 193 bits (490), Expect = 7.800e-58 Identity = 103/174 (59.20%), Postives = 140/174 (80.46%), Query Frame = 2 Query: 113 NHAVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISK-GELLASFSA-SGDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK 628 +H V++ PGS+++ P SA+++LRAKVLRQ+EYWLSDD LKKD+ IL+KM GW+PIS IA+ K+++RLN S++FIADSLRSS+ ++IVS+DG QLRRRVPFSMEK LSAD RT+VV++LPDNIS+ G+L+ FS+ SG+++H+ IV+AK + PS RKG K P V+ K Sbjct: 28 HHQVNNTPGSATV------VPSSADENLRAKVLRQIEYWLSDDQLKKDDDILQKMLGGWIPISHIAKLKRIERLNLSIDFIADSLRSST-DLIVSEDGTQLRRRVPFSMEKVLSADFRTVVVKYLPDNISEVGQLMTGFSSRSGEVDHVKIVKAKTICPSYRKGQKTPFAVHMK 194
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A7S3XTY5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTY5_HETAK) HSP 1 Score: 178 bits (451), Expect = 7.180e-52 Identity = 92/156 (58.97%), Postives = 123/156 (78.85%), Query Frame = 2 Query: 173 PLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISK-GELLASFSAS---GDIEHIHIVEAKQVYPSSRKGAKPPVPVYRK 628 P A+D LRAKVLRQ+EYWLSDD LKKD+ ILKKM+ GW+PI +A+ KQ++RLN S++FIADSLRSS+ +++VS+DG +++RRVPF ++ D RT+VVR+LPDNIS+ G+L+ SFS S ++EH+ IV+AK V PS RKG KPP PV+ K Sbjct: 47 PSLADDSLRAKVLRQIEYWLSDDQLKKDDYILKKMRGGWIPIRHLAKLKQIQRLNLSIDFIADSLRSST-DLVVSEDGTEIQRRVPFERFSSMEKDFRTLVVRYLPDNISEEGQLMTSFSTSHNSSEVEHVKIVKAKTVCPSHRKGQKPPFPVHMK 201
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: D7TK39_VITVI (Uncharacterized protein n=5 Tax=Vitis TaxID=3603 RepID=D7TK39_VITVI) HSP 1 Score: 89.0 bits (219), Expect = 1.970e-17 Identity = 51/138 (36.96%), Postives = 90/138 (65.22%), Query Frame = 2 Query: 170 TPLSAND-----DLRAKVLRQVEYWLSDDYLKKDE---TILKKMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHI 559 T LSAND D+R K+++QVEY+ SD+ L D+ +LKK K+G++PI+ IA ++MK+L ++ I +LR SS+ ++VS DG++++R P S+ + + + T+++ +LP++ S + F A+G+I+ I I Sbjct: 27 THLSANDALLADDIRGKIIKQVEYYFSDENLPTDKYLMNLLKKDKNGFVPIAVIASFRKMKKLTQDIQLIVAALRESSQ-LVVSSDGKKVKRLHPLSLTEVKDSKICTVLIENLPEDHSTENIQRIFGAAGNIKKICI 163
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6P6ABY5_DURZI (la-related protein 6C-like n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P6ABY5_DURZI) HSP 1 Score: 89.4 bits (220), Expect = 2.630e-17 Identity = 52/139 (37.41%), Postives = 88/139 (63.31%), Query Frame = 2 Query: 188 DDLRAKVLRQVEYWLSDDYLKKDETILKKMKS---GWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRK 595 DDLR K+++QVEY SD L +E++ K++ G++PIS I K++K L + + +A +LRSSS+ ++VSDDG+++RR+ PF+ ++ RT+VV +LP++ S L F+ G +++I I ++ PS K Sbjct: 116 DDLRQKIIKQVEYQFSDMSLLSNESLSKQINKDPEGYVPISFITSTKKIKSLITNNQLLAQALRSSSK-LVVSDDGKKVRRKHPFTEKEREEVQSRTVVVENLPEDHSHQNLDKIFNVVGSVKNIRICHPQESNPSRSK 253
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A0J8B5P1_BETVV (Uncharacterized protein n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B5P1_BETVV) HSP 1 Score: 86.7 bits (213), Expect = 1.330e-16 Identity = 53/150 (35.33%), Postives = 93/150 (62.00%), Query Frame = 2 Query: 119 AVDSEPGSSSICRLLPATPLSANDDLRAKVLRQVEYWLSDDYLKKDETILKKMKS---GWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHI 559 A+ S P S RL + +S++ DLRAK+++QVEY+ SD+ L D+ ++K++K G++ IS IA ++MKRL I DSL+ SS+ +++S DG++++R P ++ ++ T+VV +LP++ S + F +G I++I I Sbjct: 22 ALHSPPPSDDDARLSIESAVSSDVDLRAKIIKQVEYYFSDENLPDDKFLMKQVKKDKEGFVSISLIASFRKMKRLTKDSSLIIDSLKESSQ-LVISSDGKKVKRLHPLPSKEDKGPELCTVVVANLPEDHSVQNIQKIFGLAGSIKNISI 170
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A835RDY1_VANPL (HTH La-type RNA-binding domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RDY1_VANPL) HSP 1 Score: 85.9 bits (211), Expect = 1.910e-16 Identity = 49/128 (38.28%), Postives = 84/128 (65.62%), Query Frame = 2 Query: 185 NDDLRAKVLRQVEYWLSDDYLKKDETILKKM---KSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHI 559 +DDLR K++RQVEY+ SD+ L D+ +LK+M K G++PI+ I+ ++MK+L I +LR+S+ ++VS DG+ ++R P + + + +RTI+V +LP++ S+ +L F A G+IE + I Sbjct: 77 SDDLRDKIVRQVEYYFSDENLPNDKFLLKQMRKDKEGYVPIAIISSFRKMKKLAKDSSLIEAALRTST-ILVVSSDGKMVKRMHPLPISEPKDSKLRTILVENLPEDHSEENILRIFGAIGNIEEMTI 203
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6A2XN62_HIBSY (La-related protein 6C n=6 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XN62_HIBSY) HSP 1 Score: 87.0 bits (214), Expect = 1.940e-16 Identity = 51/139 (36.69%), Postives = 88/139 (63.31%), Query Frame = 2 Query: 188 DDLRAKVLRQVEYWLSDDYLKKDETILKKMKS---GWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRK 595 DDLR K+++QVEY SD L +E++ K++ G++P+S IA K++K L + + +A +LRSSS+ ++VSDDG+++RR+ PF+ ++ RT+VV +LP++ S L F+ G +++I I ++ S K Sbjct: 139 DDLRQKIIKQVEYQFSDMSLIANESLSKQISKDPEGYVPVSFIASTKKIKSLITNHQLLAQALRSSSK-LVVSDDGKKIRRKHPFTEKEREQVQSRTVVVENLPEDHSHQNLDKIFNVVGSVKNIRICHPQESNSSRSK 276
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6A3AX56_HIBSY (Pentatricopeptide repeat-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3AX56_HIBSY) HSP 1 Score: 86.3 bits (212), Expect = 2.200e-16 Identity = 59/166 (35.54%), Postives = 98/166 (59.04%), Query Frame = 2 Query: 125 DSEPGSSSICRLLPATPLSA-------NDDLRAKVLRQVEYWLSDDYLKKDETILKKMK---SGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSR 592 D EP + IC + P+ + N+DLR ++++QVEY LSD L +E+ K++ G++PIS IA K++K L A+ + +A L SS N++VSD+G+++RR+ PF+ ++ RT+VV +LPD+ S L F G +++I I ++ + SSR Sbjct: 72 DQEPATYMICNRNLSIPMPSFSSRNVLNNDLRQEIIKQVEYLLSDMSLIANESFSKQISRDPEGFVPISFIASTKKIKSLIANQQLLAQILTFSS-NLVVSDNGKKVRRKHPFTEKEREEVQSRTVVVENLPDDHSHQNLDKIFDVVGSVKNIRICRPQE-FNSSR 235
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Match: A0A6J1D5P1_MOMCH (la-related protein 6C n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D5P1_MOMCH) HSP 1 Score: 86.7 bits (213), Expect = 2.430e-16 Identity = 54/141 (38.30%), Postives = 84/141 (59.57%), Query Frame = 2 Query: 185 NDDLRAKVLRQVEYWLSDDYLKKDETILK---KMKSGWLPISQIAQPKQMKRLNASVEFIADSLRSSSRNIIVSDDGRQLRRRVPFSMEKALSADVRTIVVRHLPDNISKGELLASFSASGDIEHIHIVEAKQVYPSSRKG 598 +DD++ K+++QVEY SD L +E++ K K G++PIS I+ K++K L+ + I +LRSSSR ++VS DG+++RR+ PF+ + RT+VV +LPDN S L FS G ++ I I + P KG Sbjct: 111 SDDIQQKIVKQVEYQFSDMSLLANESLAKHISKDPDGYVPISVISSTKKVKSLSTNNNLIVQALRSSSR-LVVSSDGKKVRRKHPFTDKDKEELLSRTVVVENLPDNHSHHNLEKIFSVIGSVKTIRICHPPESNPCCSKG 250 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig964.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig964.3.1 >prot_H-akashiwo_Contig964.3.1 ID=prot_H-akashiwo_Contig964.3.1|Name=mRNA_H-akashiwo_Contig964.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=200bp MAGLTSETASPNKSQQKPSRPTKREPSTNHAVDSEPGSSSICRLLPATPLback to top mRNA from alignment at H-akashiwo_Contig964:50545..51172+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig964.3.1 ID=mRNA_H-akashiwo_Contig964.3.1|Name=mRNA_H-akashiwo_Contig964.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=628bp|location=Sequence derived from alignment at H-akashiwo_Contig964:50545..51172+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig964:50545..51172+ >mRNA_H-akashiwo_Contig964.3.1 ID=mRNA_H-akashiwo_Contig964.3.1|Name=mRNA_H-akashiwo_Contig964.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=600bp|location=Sequence derived from alignment at H-akashiwo_Contig964:50545..51172+ (Heterosigma akashiwo CCMP452)back to top |