prot_H-akashiwo_Contig962.8.2 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig962.8.2
Unique Nameprot_H-akashiwo_Contig962.8.2
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length89
Homology
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: D7FXA2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXA2_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 6.490e-51
Identity = 72/88 (81.82%), Postives = 83/88 (94.32%), Query Frame = 0
Query:    1 MAADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPEREDDDV 88
            MAADRFN+NRSWDHIQ KYVGTGHSD TK+EWATNQHRD++ASH+GHSDLL YFAVA+N+A+GRVRYQLLE MLQPCGPPP ++DDD+
Sbjct:   35 MAADRFNMNRSWDHIQNKYVGTGHSDTTKFEWATNQHRDSIASHIGHSDLLMYFAVAENNAVGRVRYQLLEKMLQPCGPPPAKDDDDI 122          
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: A0A662XDD1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XDD1_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.650e-47
Identity = 66/85 (77.65%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    2 AADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPEREDD 86
            AADRFN+NR W+H+QAKYVGTGH+D TK+EWA NQHRDT+ASHLGHSD+LA+FAVA+N+AIGRVRY +LE MLQPCGPPP++E+D
Sbjct:   53 AADRFNVNRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAFFAVAENEAIGRVRYNMLEKMLQPCGPPPQKEED 137          
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: H3G531_PHYRM (Splicing factor subunit n=20 Tax=Oomycota TaxID=4762 RepID=H3G531_PHYRM)

HSP 1 Score: 154 bits (390), Expect = 2.030e-47
Identity = 65/85 (76.47%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    2 AADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPEREDD 86
            AADRFNINR W+H+QAKYVGTGH+D TK+EWA NQHRDT+ASHLGHSD+LAYFAVA+N+++GRVRY +LE MLQPCGPPP++E++
Sbjct:    3 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 87          
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: W7TXH4_9STRA (Splicing factor subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXH4_9STRA)

HSP 1 Score: 154 bits (390), Expect = 2.160e-47
Identity = 69/87 (79.31%), Postives = 77/87 (88.51%), Query Frame = 0
Query:    1 MAADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPEREDDD 87
            MAADRFNINRSW+H+Q KYVGTGH D+TK+EW TNQHRDT A+HLGH D LAY AVAQNDA+GRVRYQLLE MLQPCGPPP  +DD+
Sbjct:    1 MAADRFNINRSWEHLQNKYVGTGHPDLTKHEWLTNQHRDTYATHLGHHDQLAYIAVAQNDAVGRVRYQLLEKMLQPCGPPPAAKDDE 87          
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: F0YCR2_AURAN (Splicing factor subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCR2_AURAN)

HSP 1 Score: 154 bits (388), Expect = 3.540e-47
Identity = 68/82 (82.93%), Postives = 75/82 (91.46%), Query Frame = 0
Query:    1 MAADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPE 82
            MAADR NINRSWDHIQAKYVGTGHSDMTK+EWA+NQHRD++ASHLGH D++ YFAVAQ D+IGR RY LLE MLQPCGPPPE
Sbjct:    1 MAADRMNINRSWDHIQAKYVGTGHSDMTKFEWASNQHRDSIASHLGHGDIMTYFAVAQGDSIGRTRYALLEKMLQPCGPPPE 82          
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: A0A8J5IQX8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IQX8_9STRA)

HSP 1 Score: 154 bits (390), Expect = 7.410e-47
Identity = 65/85 (76.47%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    2 AADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPEREDD 86
            AADRFNINR W+H+QAKYVGTGH+D TK+EWA NQHRDT+ASHLGHSD+LAYFAVA+N+++GRVRY +LE MLQPCGPPP++E++
Sbjct:   45 AADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHSDMLAYFAVAENESMGRVRYNMLEKMLQPCGPPPQKEEE 129          
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: K3WSC6_GLOUD (Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WSC6_GLOUD)

HSP 1 Score: 152 bits (384), Expect = 1.620e-46
Identity = 63/86 (73.26%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MAADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPEREDD 86
            MAADRFNINR W+H+QAKYVGTGH+D TK+EWA NQHRDT+ASHLGH D+L+YFA A+N+A+GRV++ +LE MLQPCGPPP++ED+
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTTKFEWAVNQHRDTLASHLGHYDMLSYFAAAENEAVGRVKFNMLEKMLQPCGPPPQKEDE 86          
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: A0A6G0XHV2_9STRA (Splicing factor subunit n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHV2_9STRA)

HSP 1 Score: 152 bits (384), Expect = 1.620e-46
Identity = 63/85 (74.12%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    1 MAADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPERED 85
            MAADRFNINR W+H+Q+KYVGTGH+D +K+EWA NQHRDT+ASH+GHSD+LAYFAVA+N++IGRVR+ +LE MLQPCGPPP+++D
Sbjct:    1 MAADRFNINRQWEHLQSKYVGTGHADTSKFEWAVNQHRDTLASHIGHSDMLAYFAVAENESIGRVRFNMLEKMLQPCGPPPKKQD 85          
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: A0A1W0A9Q9_9STRA (Splicing factor subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9Q9_9STRA)

HSP 1 Score: 152 bits (383), Expect = 2.310e-46
Identity = 64/86 (74.42%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MAADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPEREDD 86
            MAADRFNINR W+H+QAKYVGTGH+D +K+EWA NQHRDT+ASH+GH D+LAYFAVA+N++IGRVRY +LE M+QPCGPPP +E+D
Sbjct:    1 MAADRFNINRQWEHLQAKYVGTGHADTSKFEWAVNQHRDTLASHIGHKDMLAYFAVAENESIGRVRYAMLEKMVQPCGPPPIKEED 86          
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Match: F0W9E9_9STRA (Splicing factor subunit n=2 Tax=Albugo TaxID=65356 RepID=F0W9E9_9STRA)

HSP 1 Score: 150 bits (380), Expect = 6.620e-46
Identity = 62/86 (72.09%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MAADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDLLAYFAVAQNDAIGRVRYQLLENMLQPCGPPPEREDD 86
            MAADRFN+NR W+H+QAKYVGTGH+D TK+EWA NQHRDT+ASH+GH+D+L YFAVA+N++I RVRY +LE MLQPCGPPP++E++
Sbjct:    1 MAADRFNVNRQWEHLQAKYVGTGHADTTKFEWALNQHRDTLASHIGHADMLLYFAVAENESIARVRYNMLERMLQPCGPPPQKEEE 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig962.8.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXA2_ECTSI6.490e-5181.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A662XDD1_9STRA1.650e-4777.65Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3G531_PHYRM2.030e-4776.47Splicing factor subunit n=20 Tax=Oomycota TaxID=47... [more]
W7TXH4_9STRA2.160e-4779.31Splicing factor subunit n=2 Tax=Monodopsidaceae Ta... [more]
F0YCR2_AURAN3.540e-4782.93Splicing factor subunit n=1 Tax=Aureococcus anopha... [more]
A0A8J5IQX8_9STRA7.410e-4776.47Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
K3WSC6_GLOUD1.620e-4673.26Splicing factor subunit n=4 Tax=Pythiaceae TaxID=4... [more]
A0A6G0XHV2_9STRA1.620e-4674.12Splicing factor subunit n=1 Tax=Aphanomyces euteic... [more]
A0A1W0A9Q9_9STRA2.310e-4674.42Splicing factor subunit n=1 Tax=Thraustotheca clav... [more]
F0W9E9_9STRA6.620e-4672.09Splicing factor subunit n=2 Tax=Albugo TaxID=65356... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017089Splicing factor 3B, subunit 5PIRSFPIRSF037010SF3B5coord: 1..87
e-value: 1.8E-36
score: 122.1
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PFAMPF07189SF3b10coord: 4..81
e-value: 2.7E-36
score: 123.5
IPR009846Splicing factor 3B subunit 5/RDS3 complex subunit 10PANTHERPTHR20978SPLICING FACTOR 3B SUBUNIT 5coord: 2..86
NoneNo IPR availablePANTHERPTHR20978:SF0SPLICING FACTOR 3B SUBUNIT 5coord: 2..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig962contigH-akashiwo_Contig962:304766..314694 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig962.8.2mRNA_H-akashiwo_Contig962.8.2Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig962 304429..314728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig962.8.2 ID=prot_H-akashiwo_Contig962.8.2|Name=mRNA_H-akashiwo_Contig962.8.2|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=89bp
MAADRFNINRSWDHIQAKYVGTGHSDMTKYEWATNQHRDTMASHLGHSDL
LAYFAVAQNDAIGRVRYQLLENMLQPCGPPPEREDDDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017089Splicing_factor_3B_subunit_5
IPR009846SF3b5/RDS3-10