prot_H-akashiwo_Contig947.5.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig947.5.1
Unique Nameprot_H-akashiwo_Contig947.5.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length310
Homology
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S4D9L0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9L0_HETAK)

HSP 1 Score: 313 bits (801), Expect = 2.190e-99
Identity = 258/319 (80.88%), Postives = 260/319 (81.50%), Query Frame = 0
Query:    1 MNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDLADLDSDEWPXXXXXXXXXXXXXXXELKASSLGEKR--CRRGPKKKEKGRGRTREAGAAARPGRRRFSAKEAAKA---------KELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAAANRKAGRENPAAAVSEKERA 308
            MNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAE E     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    KKDLADLDSDEWP XXXXXXXXXX    ELK  +   K+       KKKEKG      AGA                          KELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAAANRKAGRENPAAAVSEKERA
Sbjct:  138 MNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEEEGGSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASKPKKDLADLDSDEWPSXXXXXXXXXXGEEAELKGRARWVKKVPAAGAEKKKEKG------AGAKXXXXXXXXXXXXXXXXXXXXXXXXXKELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAAANRKAGRENPAAAVSEKERA 450          
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S2UU87_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU87_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.400e-23
Identity = 62/114 (54.39%), Postives = 80/114 (70.18%), Query Frame = 0
Query:  175 LDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAV-RTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLA 287
            +D N+TA +LE KVLEA A+RGR  T+ + LL++L ALAY AR+FGPR ELPVLF LVS Q D   R +DDY++   WK  ++ L R + VLE H  L L  +++ DLADLVLA
Sbjct:  328 VDENITAEELEVKVLEAVASRGRRGTNIRDLLRQLQALAYAARKFGPRVELPVLFHLVSAQFDTTSRQIDDYMQTTSWKHVYACLMRVVSVLEGHQDLKLAVVADTDLADLVLA 441          
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S2HV13_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HV13_9STRA)

HSP 1 Score: 110 bits (275), Expect = 3.230e-23
Identity = 127/300 (42.33%), Postives = 176/300 (58.67%), Query Frame = 0
Query:    1 MNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPG----GAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDLADLDSDEWPXXXXXXXXXXXXXXXE---------LKASSLGEKRCRRGPKKKEKGRGRTREAGAAARPGRRRFSAKEAAKAKELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLA 287
            MN  N + LNRMKL LRKHN ++E  I A+RENP     G  G      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 KK L ++DSD+W  XXXXXXXXXX    +         LK +++  KR R+   KK +            +  ++   +K + K  E ++ ++++ ADL+ K++E  + RGR  TD K L+K L  L  + ++FGPR E+P L  LVS   D  R +DD+++LP+WK+C  ++ R   +L  +P+L L +I  +D+AD++LA
Sbjct:  135 MNKANGRALNRMKLNLRKHNLKFETEIKAYRENPEEEKEGGSGSSDNSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGKKKAP----------KKSLDEMDSDDWASXXXXXXXXXXEDVVDKALTGRDKWLKTNTVETKRVRKDKTKKPE------------QESKKADKSKTSNKRAEFSVSSDISEADLKHKIIELVSMRGRRNTDPKELIKNLNMLCQVTKKFGPRCEIPALCHLVSSFFDMQRNMDDFMDLPIWKTCHGHMMRISQILNENPELVLTSIGADDIADMILA 412          
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: D8LM18_ECTSI (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM18_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 4.900e-22
Identity = 52/115 (45.22%), Postives = 81/115 (70.43%), Query Frame = 0
Query:  173 LALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLA 287
            L LD ++++ +LE+K+ E  A+RGR  TD K +L++L  LAY+ARR GP +E+P++  LVS   D +R +D+++E  +WKSC  Y+SR   +LE+ P+LTLG +  E +ADL+ A
Sbjct:  329 LKLDLDISSEELEKKLRECLASRGRKATDPKEVLRQLSVLAYIARRLGPVREIPIIMYLVSAMFDTLRNIDEFMETSMWKSCREYISRVADLLESRPELTLGQMGNEVVADLIQA 443          
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A835YUE3_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.490e-20
Identity = 50/110 (45.45%), Postives = 78/110 (70.91%), Query Frame = 0
Query:  175 LDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADL 284
            LD  +T A +++KV E   +RGR  TD + +L++L ALAY++RRFGP +ELPVL   V+   D +R++DDY+E  +WK+C + L+R +G L+  P L LG+++ +D+ADL
Sbjct:  340 LDEKMTPAAVDRKVKEVLQSRGRKGTDPRDVLRQLAALAYVSRRFGPARELPVLMHTVAAMFDTLRSIDDYMETAMWKNCHATLTRVVGCLDECPDLRLGSMTADDMADL 449          
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S4E4E4_9STRA (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E4E4_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.100e-19
Identity = 129/296 (43.58%), Postives = 170/296 (57.43%), Query Frame = 0
Query:    1 MNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKDLADLDSDEWPXXXXXXXXXXXXXXX--ELKASSLGEKRCRRGPKKKEKGRGRTREAGAAARPGRRRFSAKEAAKAKE-----LALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLAR-RFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAA 288
            M+  N + LNRMKL LR+HNK++E +I  +R NP   E                      XXXXXXXXXXXXXXXXXXXXXXXXX         +K+L D+DSD+W XXXXXXXXXXXXXXX  ELK  +   KR     K+ +K R                   +E  K K+     L LDA  T AD ++K+ E  AARGR  TD + L + L  LA  A+ +FG  +EL     L++   D+ RT+DDY+++P W++C   L++A  +LEAHP+ TLG + +++LADL LAA
Sbjct:  131 MSKANGRALNRMKLQLRRHNKEFEAKITEYRANPDAEE--------------------ESXXXXXXXXXXXXXXXXXXXXXXXXXSVEEKPKKVQKNLEDMDSDDWXXXXXXXXXXXXXXXXTGELKGRARWLKRTVTTTKRVKKER--------VIEKXXXXXXXEEVKKDKKGLVSSLRLDAIQTGADFDKKLTEVMAARGRKGTDPRDLKQALEVLAKAAQEKFGFHRELQCCMHLIASHFDSNRTIDDYMDVPTWRACHGQLTKACSILEAHPQATLGTVDDDELADLALAA 398          
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A6U3ZAQ9_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZAQ9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.390e-13
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 0
Query:  171 KELALDANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLE 266
            K +  +++LT + L +K+ E  A RGR  TD K +L++L  L+ LA RFGPR E+P L  +++ Q D VRTLDDY+E   W+SC  YL R   +L+
Sbjct:  324 KSIIPESSLTPSLLVKKIGEVVALRGRKGTDNKVVLRQLEGLSRLAARFGPRSEVPALIFVITAQFDLVRTLDDYMETKTWRSCAEYLGRVANILD 419          
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S0GHY7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GHY7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.010e-12
Identity = 55/130 (42.31%), Postives = 80/130 (61.54%), Query Frame = 0
Query:  176 DANLTAADLEQKVLEAAAARGRSKTDAKALLKRLGALAYLAR-RFG--PRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLEAHP-KLTLGAISEEDLADLVLAAANRKAGRENPAAA 301
            D +LT + L +K  E    RGR   D K L++ L +LA LAR RFG   R E+P+L   V+   D  R++DDY+E+  WKSC SYL+R + VLE+   + TLG ++ EDLA+ +L   + K+G++   AA
Sbjct:  320 DESLTPSVLNRKCKELLMTRGRKGADPKELVRGLESLAKLARERFGNDARVEIPLLMNTVTSMFDLQRSMDDYMEMFQWKSCHSYLTRIVDVLESEGGRYTLGVLAAEDLANDLLMERSSKSGKKMKGAA 449          
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Match: A0A7S3DTP5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DTP5_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.320e-11
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 0
Query:  184 LEQKVLEAAAARGRSKTDAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPVWKSCWSYLSRALGVLE 266
            L +KV E AA RGR   D + LL+ L AL  L+ +FGPR E+P++  ++S Q    RTLDDY++  VWKSC  YL R   VLE
Sbjct:   58 LNKKVKELAAQRGRRGKDNRQLLRELEALYRLSVKFGPRIEIPIVMNVISAQYGLQRTLDDYMDTAVWKSCALYLQRITDVLE 140          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig947.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A7S4D9L0_HETAK2.190e-9980.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2UU87_9STRA2.400e-2354.39Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S2HV13_9STRA3.230e-2342.33Eukaryotic translation initiation factor 3 subunit... [more]
D8LM18_ECTSI4.900e-2245.22Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YUE3_9STRA2.490e-2045.45Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S4E4E4_9STRA1.100e-1943.58Eukaryotic translation initiation factor 3 subunit... [more]
A0A6U3ZAQ9_9STRA1.390e-1344.79Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S0GHY7_9STRA1.010e-1242.31Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S3DTP5_9STRA6.320e-1149.40Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 167..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..166
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..76
IPR008905Eukaryotic translation initiation factor 3 subunit C, N-terminal domainPFAMPF05470eIF-3c_Ncoord: 1..276
e-value: 2.3E-20
score: 72.4
IPR027516Eukaryotic translation initiation factor 3 subunit CPANTHERPTHR13937EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATEDcoord: 1..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig947contigH-akashiwo_Contig947:188234..204960 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig947.5.1mRNA_H-akashiwo_Contig947.5.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig947 186388..204960 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig947.5.1 ID=prot_H-akashiwo_Contig947.5.1|Name=mRNA_H-akashiwo_Contig947.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=310bp
MNGPNAKGLNRMKLVLRKHNKQYEDRIAAFRENPGGAEGEGGSASSSSSS
SGSDSDSSSSGSSSGSDSGSDSDSDSGSESDASEKKKKKPASKPKKDLAD
LDSDEWPSDAESDSDSSDGEEAELKASSLGEKRCRRGPKKKEKGRGRTRE
AGAAARPGRRRFSAKEAAKAKELALDANLTAADLEQKVLEAAAARGRSKT
DAKALLKRLGALAYLARRFGPRKELPVLFQLVSVQLDAVRTLDDYLELPV
WKSCWSYLSRALGVLEAHPKLTLGAISEEDLADLVLAAANRKAGRENPAA
AVSEKERAAE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008905EIF3C_N_dom
IPR027516EIF3C