mRNA_H-akashiwo_Contig1237.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: A0A7S3Y6W1_HETAK (RNA-directed DNA polymerase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6W1_HETAK) HSP 1 Score: 620 bits (1599), Expect = 2.250e-204 Identity = 311/589 (52.80%), Postives = 413/589 (70.12%), Query Frame = 1
Query: 1 RDRWCLDLSFVNFALEDFDHPVPRIDEILEKMAESKVFSELDVKEAFNSMRINEELSDLFTFSTSFGKISYVVMPFGVKWGSSRFQYGMECGFQEYLDKFLLLYIDNMNVHTDDFRSHLEALKLTFARCRELNLKLRREKCYFGQTSLRTMGFIVEHNKLRPDPKKVEMITSAPIPTDHTALRSFLGLVQFYRSMLCHLSHAAYPLYRLTSSKVDFVWTEEHTKAFEACKDMIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQKGRLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRKVREIENYKLINAVLSVAEFEFTLIYLPGKKNVLADFGTRLLPPTTPTEDDTEYA-LENLNGIPSTIMAH------------FSSWPCAN----EESTVGPVQIIPTPQIKYHQYDSRDFQELNDSPHEHTKEGEELIIIINGQRNALVPHRIRRPIFWSLHFPRHQSVNYVYDQLKDKHLYWPNMKNDLLEYLSSCECTMAKDTPPPSYNHNNELVKPIWAKQPLDLVCMDIYEYDSKNFLTLIDVFSKYGFAFHVEECTIAAI 1716
RDRWCLDL +N LEDFDHP+P + +++E M SKVFSELD+KEAFNS+RIN ELSDLFTF+TS GKISY VMP+GVKWGSS FQ+ ME GF+E+L+ L LYIDN+ VHT+ +HL AL+ F RCRELNLKLR EKC F +T +RTMGFIV+H L+PDP K++MI SAP+PTD +ALR FLGL+QFYRSM+ LS A PLY+LTSS V F+WTE H KAFE K ++++D L+ +L+GD+DI V+ DASK+A+C V++QK +LI+ ASK+L NE NWHIIEKE AISWGLNK YYLLGRKF++++DH PL+ IFR + + N +L+ LSVAEF F L YL GK+NVLADFG+R L P +D+ E LENL G+P I++ FS A ES+ +I+ P+IK H Y + D+ ++ + + EGE +++ +N VP +RR FW LHFPRH+S+N +Y ++K L++P MK + ++LSSC C+ K+ PP + E WA +PLD++C+D+YEY ++N+LT+IDVFS+Y FAF V + T +
Sbjct: 754 RDRWCLDLRMLNACLEDFDHPLPNLQDVIEGMTRSKVFSELDLKEAFNSLRINRELSDLFTFTTSQGKISYKVMPYGVKWGSSIFQWNMEEGFREFLETILFLYIDNLIVHTESLSTHLIALRNIFQRCRELNLKLRLEKCAFAKTVIRTMGFIVQHGSLKPDPIKIDMIRSAPVPTDASALRRFLGLMQFYRSMMAQLSMVAQPLYKLTSSTVPFIWTETHQKAFELLKTLMSEDTLRRSLVGDDDIVVYTDASKFAICVVVTQKNQLIHAASKILQDNEANWHIIEKEALAISWGLNKMDYYLLGRKFVLLSDHKPLLAIFRNLTSVSNARLLQCALSVAEFTFVLKYLEGKRNVLADFGSRDLDPKLWHDDEDEKCKLENLRGVPHFILSQNDVSAILPYTMTFSESSSAMMMNANESSNSRDEILQKPKIKNHHYRAEDYAQIQKNNLVYRSEGEVIVVTVNEDDFVFVPLCLRRSFFWYLHFPRHESLNNIYYRMKSLKLFYPKMKEAISDFLSSCACSNQKNQPPRKLITSREEETCFWAAKPLDILCIDLYEYAARNYLTMIDVFSRYAFAFEVYDKTAGEV 1342
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: A0A6V1V9I9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1V9I9_HETAK) HSP 1 Score: 410 bits (1053), Expect = 1.060e-130 Identity = 221/539 (41.00%), Postives = 337/539 (62.52%), Query Frame = 1
Query: 106 KVFSELDVKEAFNSMRINEELSDLFTFSTSFGKISYVVMPFGVKWGSSRFQYGMECGFQEYLDKFLLLYIDNMNVHTDDFRSHLEALKLTFARCRELNLKLRREKCYFGQTSLRTMGFIVEHNKLRPDPKKVEMITSAPIPTDHTALRSFLGLVQFYRSMLCHLSHAAYPLYRLTS-SKVDFVWTEEHTKAFEACKDMIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQKGRLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRKVREIENYKLINAVLSVAEFEFTLIYLPGKKNVLADFGTRLLPPTT-PTEDDTEYALENLNGIPSTIMAHFSSWPCANEESTVGPVQIIPTPQIKYHQYDSRDFQELNDSPHEHTKEGEELIIIINGQRNALVPHRIRRPIFWSLHFPRHQSVNYVYDQLKDKHLYWPNMKNDLLEYLSSCECTMAKDTPPPSYNHNNELVKPIWAKQPLDLVCMDIYEYDSKNFLTLIDVFSKYGFAFHVEECTIAAI 1716
K +SELD+ AFN MR++ ELSDL TF+TSFGK+SY+V+P+G+K+ + FQ+G+E F E+L K + +Y+DNM V+ + R H + LK F RCR+ NLKLR EKC FG LRT+GFIV + DP K++++ +APIPT L+SFLGL ++R+ L +L+HAA PLY LT S DF WT+ +A+E K ++ ++++ H +DI V+VDASK A+ VI Q+G+LI++ S+ L E+ WHIIE E A+ + L K +++L GRKFL TDH PL+ I++K +IEN +L+ +VLSV E++F L+++PG++NVLAD+G+R + P PT+D+ L+++ ++A F V P + +P I Y DF EL + + T+E L + +N + VP+++R+ F H RH+ VN + + K+ Y+P MK+ L +LS+C C AKD K I A +P+DLV +D+Y YD K +L ++D+FSK+ F + ++ T+ +
Sbjct: 4 KYYSELDLANAFNQMRVSPELSDLLTFTTSFGKVSYLVLPYGIKFATDAFQFGVENHFYEFLHKAMSIYVDNMLVYANTRRQHAKDLKDIFQRCRDGNLKLRLEKCVFGVEELRTLGFIVRKGSITVDPIKLQILKNAPIPTTPKELKSFLGLANYFRAYLPYLAHAAAPLYNLTHRSDDDFQWTDVEDRAYEKVKQLLERELMLHAFDEAKDIHVYVDASKVAIAGVILQEGKLISSVSRTLSKPERKWHIIELEALAVRYTLQKLRHFLHGRKFLCFTDHKPLLQIWKKAAKIENVRLLTSVLSVTEYDFELLHIPGEENVLADYGSRNIDPDIYPTDDE----LQDIEDWVGNMIASF-----------VRPEEELPA--ITMDDYTHVDFDELQEKGFKETEENGALHVTVNRRVYTYVPNKLRQSFFHVFHAERHRGVNEMVLETKEAGYYFPGMKDTYLAFLSTCPCAGAKDFRTALRRTKG---KGITALRPMDLVALDVYFYDQKYYLVMVDIFSKFPFVYTLKNKTMEEV 522
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: A0A7S3Y785_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y785_HETAK) HSP 1 Score: 369 bits (946), Expect = 5.700e-119 Identity = 197/471 (41.83%), Postives = 299/471 (63.48%), Query Frame = 1
Query: 106 KVFSELDVKEAFNSMRINEELSDLFTFSTSFGKISYVVMPFGVKWGSSRFQYGMECGFQEYLDKFLLLYIDNMNVHTDDFRSHLEALKLTFARCRELNLKLRREKCYFGQTSLRTMGFIVEHNKLRPDPKKVEMITSAPIPTDHTALRSFLGLVQFYRSMLCHLSHAAYPLYRLTS-SKVDFVWTEEHTKAFEACKDMIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQKGRLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRKVREIENYKLINAVLSVAEFEFTLIYLPGKKNVLADFGTRLLPPTT-PTEDDTEYALENLNGIPSTIMAHFSSWPCANEESTVGPVQIIPTPQIKYHQYDSRDFQELNDSPHEHTKEGEELIIIINGQRNALVPHRIRRPIFWSLHFPRHQSVNYVYDQLKDKHLYWPNMKNDLLEYLSSC 1512
K +SELD+ AFN MR++ ELSDL TF+TSFGK+SY+V+P+G+K+ + FQ+G+E F E+L K + +Y+DNM V+ + R H + LK F RCR+ NLKLR EKC FG LRT+GFIV + DP K++++ +APIPT L+SFLGL ++R+ L +L+HAA PLY LT S DF WT+ +A+E K ++ ++++ H +DI V+VDASK A+ VI Q+G+LI++ S+ L E+ WHIIE E A+ + L K +++L GRKFL TDH PL+ I++K +IEN +L+ +VLSV E++F L+++PG++NVLAD+G+R + P PT+D+ L+++ ++A F V P + +P I Y DF EL + T++ L + +N + VP+++R+ F H RH+ VN + + K+ Y+P MK+ L +LS+C
Sbjct: 4 KYYSELDLANAFNQMRVSPELSDLLTFTTSFGKVSYLVLPYGIKFATDAFQFGVENHFYEFLHKAMSIYVDNMLVYANTRRQHAKDLKDIFQRCRDGNLKLRLEKCVFGVEELRTLGFIVRKGSITVDPIKLQILKNAPIPTTPKELKSFLGLANYFRAYLPYLAHAAAPLYNLTHRSDDDFQWTDVEDRAYEKVKQLLERELMLHAFDEAKDIHVYVDASKVAIAGVILQEGKLISSVSRTLSKPERKWHIIELEALAVRYTLQKLRHFLHGRKFLCFTDHKPLLQIWKKAAKIENVRLLTSVLSVTEYDFELLHIPGEENVLADYGSRNIDPDIYPTDDE----LQDIEDWVGNMIASF-----------VRPEEELPA--ITMEDYTHVDFDELQERGFNETEDNGALHVTVNKKTYIYVPNKMRQSFFHVFHAGRHRGVNEMVLETKEAGYYFPGMKDTYLAFLSTC 457
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: A0A7S3Y7C7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y7C7_HETAK) HSP 1 Score: 326 bits (836), Expect = 8.090e-104 Identity = 165/343 (48.10%), Postives = 241/343 (70.26%), Query Frame = 1
Query: 106 KVFSELDVKEAFNSMRINEELSDLFTFSTSFGKISYVVMPFGVKWGSSRFQYGMECGFQEYLDKFLLLYIDNMNVHTDDFRSHLEALKLTFARCRELNLKLRREKCYFGQTSLRTMGFIVEHNKLRPDPKKVEMITSAPIPTDHTALRSFLGLVQFYRSMLCHLSHAAYPLYRLTS-SKVDFVWTEEHTKAFEACKDMIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQKGRLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRKVREIENYKLINAV-LSVAEFEFTLIYLPGKKNVLADFGTRLLPPTT-PTEDD 1125
K +SELD+ AFN MR++ ELSDL TF+TSFGK+SY+V+P+G+K+ + FQ+G+E F E+L K + +Y+DNM V+ + R H + LK F RCR+ NLKLR EKC FG LRT+GFIV + DP K++++ +APIPT L+SFLGL ++R+ L +L+HAA PLY LT S DF WT+ +A+E K ++ ++++ H +DI V+VDASK A+ VI Q+G+LI++ S+ L E+ WHIIE E A+ + L K +++L GRKFL TDH PL+ I++K +IEN +L+ +V LSV E+EF L+++PG++NVLAD+G+R + P PT+D+
Sbjct: 4 KYYSELDLANAFNQMRVSPELSDLLTFTTSFGKVSYLVLPYGIKFATDAFQFGVENHFYEFLHKAMSIYVDNMLVYANTRRQHAKDLKDIFQRCRDGNLKLRLEKCVFGVEELRTLGFIVRKGSITVDPIKLQILKNAPIPTTPKELKSFLGLANYFRAYLPYLAHAAAPLYNLTHRSDDDFQWTDVEDRAYEKVKQLLERELMLHAFDETKDIHVYVDASKVAIAGVILQEGKLISSVSRTLSKPERKWHIIELEALAVRYTLQKLRHFLHGRKFLCFTDHKPLLQIWKKAAKIENVRLLTSVVLSVTEYEFELLHIPGEENVLADYGSRNIDPDIYPTDDE 346
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: UPI00109BC22A (uncharacterized protein K02A2.6 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BC22A) HSP 1 Score: 219 bits (558), Expect = 9.620e-58 Identity = 154/521 (29.56%), Postives = 268/521 (51.44%), Query Frame = 1
Query: 1 RDRWCLDLSFVNFALEDFDHPVPRIDEILEKMAESKVFSELDVKEAFNSMRINEELSDLFTFSTSFGKISYVVMPFGVKWGSSRFQYGMECGFQEYLDKFLLLYIDNMNV---HTDDFRSHLEALKLTFARCRELNLKLRREKCYFGQTSLRTMGFIVEHNKLRPDPKKVEMITSAPIPTDHTALRSFLGLVQFYRSMLCHLSHAAYPLYRLTSSKVDFVWTEEHTKAFEACKDMIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQKGRLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRKVREIENYKLINAVLSVAEFEFTLIYLPGKKNVLADFGTRLLPPTTPTEDDTEYALENLNGIPSTIMAHFSSWPCANEESTVGPVQ-IIPT-----PQIK-------YHQYDSRDFQELNDSPHEHTKEGEELIIIINGQRNALVPHRIRRPIFWSLHFPRHQSVNYVYDQLKDKHLYWPNMKNDLLEYLSSCE 1515
R R C+D +N AL+ +P+P I+EIL +++E+KVF++LD+K+ F + ++EE S+L TF T +G+ ++ MPFG+ FQ ++ + F + D++ V D + H E L+ RC N+KL ++K + ++ +G ++ + L+PDP KV IT+ P A+R +G+V++ L LS + PL RLT V F W EH ++F++ K M+++ + E +E DAS + + Q G+ + +S+ L + E+N+ +IEKE ++ +GL N Y GR ++TDH PLV I++K +L +L + +++ T+ YL G++ +AD +R+ PP T E E+++ + ++ NE S +Q +I T P++K + YD RD EL T +G +++ GQR ++P +R I +H H + + ++ +YWP M DL +Y+S C+
Sbjct: 441 RVRVCIDPLHLNKALKRSHYPLPVIEEILPELSEAKVFTKLDLKDGFLQVELDEESSELTTFQTPWGRYRWLRMPFGITPAPEXFQQKLDQNLEGLKGTFKIA--DDILVIGQGDDPNKDHDENLRRVLERCXSXNIKLNQKKFVYKTDAVSFIGHLLTKDGLKPDPSKVNAITNIKRPEVVEAVRRLIGMVKYLSKFLKDLSSVSEPLRRLTHKGVPFQWQREHDESFQSIKRMVSQASVLRYYNSTEPLEGQGDASSTGLGFTLMQNGQPVTFSSRALTTAERNYALIEKELLSLVYGLEHNHQYAYGRPIKLITDHKPLVAIYKKPLITAPKRLQRLLLRLQQYDVTIEYLKGEEMYIADTLSRVHPPAPRTRSQAEEETEHIHTVQFLAISETQLQEIQNETSCHSTLQQLINTIHNGWPEVKAKLPKELHPYYDIRD--ELT------TLDG----VVLKGQR-CVIPAGLRTKIKTKIH-SSHTGIQSCLRRAREL-VYWPGMNKDLSDYISKCD 944
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: A0A016TQU4_9BILA (Uncharacterized protein n=1 Tax=Ancylostoma ceylanicum TaxID=53326 RepID=A0A016TQU4_9BILA) HSP 1 Score: 216 bits (550), Expect = 1.810e-56 Identity = 160/587 (27.26%), Postives = 281/587 (47.87%), Query Frame = 1
Query: 7 RWCLDLSFVNFALEDFDHPVPRIDEILEKMAESKVFSELDVKEAFNSMRINEELSDLFTFSTSFGKISYVVMPFGVKWGSSRFQYGMECGFQEYLDKFLLLYIDNMNVHTDDFRSHLEALKLTFARCRELNLKLRREKCYFGQTSLRTMGFIVEHNKLRPDPKKVEMITSAPIPTDHTALRSFLGLVQFYRSMLCHLSHAAYPLYRLTSSKVDFVWTEEHTKAFEACKD------MIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQKG-----RLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRKVREIENYKLINAVLSVAEFEFTLIYLPGKKNVLADFGTRLLPPTTPTEDDTEYALENLNGIPSTIMAHFSSWPCANEESTVGPVQIIPTPQIKYHQYDSRDFQELNDSPHEHT----KEGEELIIIINGQRNALVPHRIRRPIFWSLH---FPRHQSVNYVYDQLKDKHLYWPNMKNDLLEYLSSCECTMAKDTPPPSYNHNNELVKPIWAKQPLDLVCMDIYEYD-----SKNFLTLIDVFSKYGFAFHVEE 1698
R C+D VN + +P+P ID L+ + + F+ LD+ + + + E ++ F+T+ G + V+PFG+ + FQ M+ E + +YID++ V T+ HL L+ F R LKL+ +KC ++ L +G IV+ + + DP KV I P P + LR+FLG+ +YR + +H A PLY LTS+K +F+WTEEH KAF+ K ++A+ ++ G ++ DAS+ V V++Q+G ++ ASK L E+N+H+ ++E A+ + + K Y++ G + +V TDH+ L +FR+ + +++ L + ++ + ++ G N +AD R + E D E + TI + S W EE + P + P Q D +D ++G +I + +VP R P+F H H + ++ QLK K ++WP M+ DL+++ C+ + + N +KPI A +P +V +D+ E ++ +T+ID F+KY A+ + +
Sbjct: 914 RLCVDYREVNKVTKKDSYPLPAIDVTLQGLEGKRFFTSLDLASGYWQVPLTPEAREISAFTTTAGLFEFCVLPFGLTNAPAEFQRLMDKVLGELRGSEVSVYIDDILVATETMERHLVVLRRVFDALRRARLKLKPQKCRLMESKLEFLGHIVDQDGVWVDPDKVARIVEYPTPQNLAELRTFLGMAGYYRKFVLRFAHTAKPLYDLTSTKANFIWTEEHQKAFDMLKQHLTTAPVLAQPDVEKARNGSRPFYIYTDASRSGVGAVLAQEGDDGFLHPLHFASKALSRAERNYHVTDQEALAVIFAVQKFHYFIYGVRTIVRTDHASLTSLFRRANV--SPRVLRWALELQRYDLHIEHVKGNANCVADALYRRV---AKVEGDAEPTSAINEKVVCTIKS--SEW---LEELRLDP-EFAPVVAAVEDQVDQEVRLPRSDKSFNTADFVIEDGRLKLIQADDTLVEVVPKEKRYPLFLEAHQGIMAGHFNAKKMFAQLKRK-VFWPGMRQDLVKWCRECQRCFVSNPK----SGNIPPLKPIAASKPFQIVGIDLLEMGPTTRGNRYIVTIIDHFTKYLGAYPIPD 1484
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: A0A7S3XZG2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZG2_HETAK) HSP 1 Score: 202 bits (513), Expect = 3.350e-56 Identity = 119/329 (36.17%), Postives = 187/329 (56.84%), Query Frame = 1
Query: 688 KDMIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQKGRLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRKVREIENYKLINAVLSVAEFEFTLIYLPGKKNVLADFGTRLLPPTTPTEDDTEY-ALENLNGIPSTIMAHFSSWPCANEESTVGPVQIIPTPQIKYHQYDSRDFQELNDSPHEHTKEGEELIIIINGQRNALVPHRIRRPIFWSLHFPRHQSVNYVYDQLKDKHLYWPNMKNDLLEYLSSCECTMAKDTPPPSYNHNNELVKPIWAKQPLDLVCMDIYEYDSKNFLTLIDVFSK 1671
K ++ ++++ H+L+GDE IEVFVDA K A+ VI Q G+LI++ S+ L E+ HIIE E AI + L K K++L GR+F V TDH PL+ I++K IEN +L+++VL+V E++F + ++ G+KNVLAD+G+R + D ++Y E L+G+ + F+S N + P I Y S D+ EL ++ L + G+R VP ++R+ F +H +H V + K Y+P M++ LE+LSSC C AK+ + K I A +P+DLV +D+Y YDS N+L ++DV+S+
Sbjct: 30 KALLERELMIHSLVGDEPIEVFVDAFKVAIAGVIIQNGKLISSVSRTLTKAERKHHIIELEALAIRYSLQKMKHFLHGREFTVFTDHKPLLGIWKKAALIENIRLLSSVLAVTEYQFEMKHIEGEKNVLADYGSRQI-------DSSQYPTAEELSGMDDFLDTIFASLVDDN----------MQLPNIDMEDYTSGDYDELQKFSISEMQQDGVLYVTHRGERLIYVPSKLRQAFFHCIHTTKHMGVTEMCATTKQLGYYFPLMQDKYLEFLSSCPCAGAKNYRTGLQKYKG---KGITATRPMDLVALDLYMYDSINYLVMVDVYSR 338
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: A0A1Y1MCJ7_PHOPY (RNA-directed DNA polymerase n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1MCJ7_PHOPY) HSP 1 Score: 213 bits (541), Expect = 2.210e-55 Identity = 160/562 (28.47%), Postives = 273/562 (48.58%), Query Frame = 1
Query: 7 RWCLDLSFVNFALEDFDHPVPRIDEILEKMAESKVFSELDVKEAFNSMRINEELSDLFTFSTSFGKISYVVMPFGVKWGSSRFQYGMECGFQE-YLDKFLLLYIDNMNVHTDDFRSHLEALKLTFARCRELNLKLRREKCYFGQTSLRTMGFIVEHNKLRPDPKKVEMITSAPIPTDHTALRSFLGLVQFYRSMLCHLSHAAYPLYRLTSSKVDFVWTEEHTKAFEACKDMIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQKGRLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRKVREIENYKLINAVLSVAEFEFTLIYLPGKKNVLADFGTRLLPPTTPTEDDTEYALENLNGIPSTIMAHFSSWPCANEESTVGPVQIIPTPQIKYHQYDSRDFQELNDSPHEHTKEGEELIIIING----QRNALVPHRIRRPIFWSLHFPRHQSVNYVYDQLKDKHLYWPNMKNDLLEYLSSCE-CTMAKDTPPPSYNHNNELVKPIWAKQPLDLVCMDIYEYDSKNFLTLIDVFSKY 1674
R CLD +N +++D + + +D+I+ + S VF+ LD F ++ +++E S L TF+T FG+ ++ MPFG+K S FQ FQE + D + +YID++ VH D + H E LK F + E N+K KC FG ++ +G+ + D +K++ I + P P + ++ FLG + + + +LS PL + + F W E KAF K+++ K+ + + I + VDASK + V+ Q + AS+ + + +QN+ IEKE AI +G+NK Y+ G KF+V TDH PL+ IF+K +L +LS+ +++ LIY PGK ++AD +R T +D+ + + I+ E S +Q I KY ++ + + K E+ + NG + ++P R I +H H +N + K +YWPNM + + ++ CE C ++ ++E++K W K V +D+YE K +L ++D +SK+
Sbjct: 512 RICLDPKNLNESIKDSKYKLTSLDDIISNINGSTVFTLLDATSGFWNIPLDKESSKLCTFATPFGRYKFLRMPFGIKTASEVFQER----FQEIFADNGVQVYIDDILVHGKDKQEHDERLKNVFRKAHEQNVKFNLSKCRFGVGEIKYLGYKFSSEGIMIDEEKIDAIKNMPQPKNKKDIQRFLGFITYVGRFIENLSEKTQPLREIIKQENLFEWGEPQNKAFVELKNLVIKEPILRYYNPKKPITLSVDASKSGLGAVLLQDNQPCAYASRAMTTTQQNYAQIEKELLAIVFGVNKFHQYVYGTKFIVETDHKPLIAIFKKPLNACPARLQRMLLSLQKYQIHLIYKPGKDLIIADTLSRANSSKT-FDDNLDLEAQVCLIQKKLIITDNRVAQLVKEVSKDEELQSIK----KYVVNGWPSISKIPSNIKPYHKLKAEITLGTNGLIYMSQRVIIPQSWRSKILDDIH-TGHLGINKCISRAKSS-VYWPNMNSHIETLVNKCEMCNRHANSNKREPMISHEIIKKPWQK-----VGIDLYEVSGKIYLIVVDYYSKF 1057
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: X1XU31_ACYPI (RNA-directed DNA polymerase n=2 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1XU31_ACYPI) HSP 1 Score: 203 bits (516), Expect = 3.320e-52 Identity = 163/579 (28.15%), Postives = 284/579 (49.05%), Query Frame = 1
Query: 7 RWCLDL-SFVNFALEDFDHPVPRIDEILEKMAESKVFSELDVKEAFNSMRINEELSDLFTFSTSFGKISYVVMPFGVKWGSSRFQYGMECGFQEYLDKFLLLYIDNMNVHTDDFRSHLEALKLTFARCRELNLKLRREKCYFGQTSLRTMGFIVEHNKLRPDPKKVEMITSAPIPTDHTALRSFLGLVQFYRSMLCHLSHAAYPLYRLTSSKVDFVWTEEHTKAFEACKDMIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQ-----KGRLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRK---VREIENYKLINAVLSVAEFEFTLIYLPGKKNVLADFGTRLLPPTTPTEDDTEYA-LENLNG-IP------------STIMAHFSSWPCANEESTVGPVQIIPTPQIKYHQYDSRDFQELNDSPHEHTKEGEELIIIINGQRNALVPHRIRRPIFWSLHFPRHQSVNYVYDQLKDKHLYWPNMKNDLLEYLSSCECTMAKDTPPPSYNHNNELVKPIWAKQPLDLVCMDIYEYDSKNFLTLIDVFSKY 1674
R C D + +N LED+++P+ +++E+ + K FS+LD A+N + I E+ L +ST G +PFG K S FQ +E Q K + ++D++ V D HL L+ F R + KL KC F Q + +G +++ +R D KV+ I A IP + T +++F+G++ +Y + +LS P+Y+L + F WT + +AF K+ + D + + +++ DAS+Y V V+ + I+ AS+VL E+ + +I+KE AI W + K YLLGRKF++ +DH PL+ +F + + + + +L L ++EF++ L Y+ G+ N AD +RL E+D EY+ ++ + G IP +TI++ SW EE V + +Y Y R ELN ++G +I+ G R ++P+++R + +H H + + + + +WP + ++ Y+ SCE ++ P + K + A PLD V +D ++KN+L ID F+K+
Sbjct: 284 RLCADYKTTINKYLEDYNYPLLKVEELFVALQGGKFFSKLDFINAYNQLEICEDTQKLLAWSTHKGIYKVKRLPFGTKPACSIFQQVIEKVLQGL--KGVKNFLDDIIVTGVDDEDHLNNLREVFKRLLDAGFKLNVNKCCFFQKQVNYLGHVIDGEGIRKDKDKVKAIVEARIPQNVTEVKAFVGMINYYAKFIPNLSTLLGPMYKLLKKNITFKWTNQCNEAFNKSKEAMTSDSVLVHFNPEIQVKLLCDASEYGVGAVLVHVFSDGTEKPISYASRVLTVAERKYAVIQKEALAIFWSVKKFSQYLLGRKFILCSDHKPLLALFGEHNGIPRMASNRLQRWTLFLSEFDYELKYVQGRNNCAADGLSRLPLKIKSDENDNEYSYIDFVEGMIPLDVLKIKIETRKNTILSKVYSW---IEEGWPEKVDL------EYKGYFIRK-SELN------IEKG----VIMWGYR-VIIPNKLRIFLLKEIH-STHAGIAKM-KAVTRSYFWWPGLDKEIESYVKSCEVCVSCQASPVV----DRQAKWVEAVGPLDRVHLDFLYLNNKNYLVWIDAFTKW 833
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Match: UPI0006AAC4D5 (uncharacterized protein LOC106407769 n=1 Tax=Brassica napus TaxID=3708 RepID=UPI0006AAC4D5) HSP 1 Score: 203 bits (516), Expect = 4.640e-52 Identity = 149/518 (28.76%), Postives = 259/518 (50.00%), Query Frame = 1
Query: 7 RWCLDLSFVNFALEDFDHPVPRIDEILEKMAESKVFSELDVKEAFNSMRINEELSDLFTFSTSFGKISYVVMPFGVKWGSSRFQYGMECGFQEYLDKFLLLYIDNMNVHTDDFRSHLEALKLTFARCRELNLKLRREKCYFGQTSLRTMGFIVEHNKLRPDPKKVEMITSAPIPTDHTALRSFLGLVQFYRSMLCHLSHAAYPLYRLTSSKVDFVWTEEHTKAFEACKDMIAKDILKHTLIGDEDIEVFVDASKYAVCCVISQKGRLINTASKVLLSNEQNWHIIEKEPHAISWGLNKNKYYLLGRKFLVMTDHSPLVHIFRKVREIENYKLINAVLSVAEFEFTLIYLPGKKNVLADFGTRLLPPTTPTEDDTEYALENLNGIPSTIMAHFSSWPCANEESTVGPVQIIPTP---QIKYHQYDSRDFQELNDSP---HEHTKEGEELIIIINGQRNALVPHRIRRPIFWSLH---FPRHQSVNYVYDQLKDKHLYWPNMKNDLLEYLSSCE-CTMAK 1530
R C+D +N +P+PRIDE+L+++ +K FS++D+ ++ + I F T +G +VVMPFG+ + F M F+++LD+F++++ID++ V++ H L+ R RE L + KC F Q S+ +G IV + DP+K++ I + P P + T +RSFLGL +YR + + A P+ +LT V FVWT E K F A KDM+ + D+ V+ DAS + CV++Q G++I S+ L +E N+ + E A+ + L + YL G K ++TDH L +IF + N + + VA+++ + Y PGK N++AD +R E E E L G+ ++ H ++ A+E+ +G + P +I+ Q + Q++ + ++ T +G I++ G+ + ++ I + H F H +Y LK ++ +W MK D+ E+++ C C + K
Sbjct: 532 RLCIDYRGLNRVTVKNKYPLPRIDELLDQLKGAKWFSKIDLASGYHQIPIEPNDIRKTAFQTRYGHYEFVVMPFGLTNAPTAFMKMMNDIFRDFLDEFVIIFIDDILVYSRSKEDHERHLRAVLERLREQQLFAKLSKCSFWQRSIGFLGHIVSDQGVYVDPEKIQSIRAWPQPKNATEVRSFLGLAGYYRKFVKGFASLAQPMTQLTGKDVKFVWTGECEKCFTALKDMLTSAPVLVLPEADQPYVVYTDASITRLGCVLTQHGKMIAYTSRQLRKHEGNYPTHDLEMAAVVFALKIWRSYLYGAKVQILTDHKSLKYIFTQPEL--NLRQRRWMEFVADYDLDIAYHPGKANLVADALSRRR-----AEVSAEKEAEVLEGMVWSL--HLNT--LASEDEPLGLEAVNPADLLTRIRQAQGLDANLQKVAQNELTKYQITSDG---TILVRGRVSVPNDKNLKEEIMRTAHKSKFSIHPGATKMYQDLK-RYYHWIRMKVDIAEWVAKCATCQLVK 1034 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig1237.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig1237.3.1 >prot_H-akashiwo_Contig1237.3.1 ID=prot_H-akashiwo_Contig1237.3.1|Name=mRNA_H-akashiwo_Contig1237.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=574bp RDRWCLDLSFVNFALEDFDHPVPRIDEILEKMAESKVFSELDVKEAFNSMback to top mRNA from alignment at H-akashiwo_Contig1237:143342..145063+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig1237.3.1 ID=mRNA_H-akashiwo_Contig1237.3.1|Name=mRNA_H-akashiwo_Contig1237.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1722bp|location=Sequence derived from alignment at H-akashiwo_Contig1237:143342..145063+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig1237:143342..145063+ >mRNA_H-akashiwo_Contig1237.3.1 ID=mRNA_H-akashiwo_Contig1237.3.1|Name=mRNA_H-akashiwo_Contig1237.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1722bp|location=Sequence derived from alignment at H-akashiwo_Contig1237:143342..145063+ (Heterosigma akashiwo CCMP452)back to top |