prot_H-akashiwo_Contig935.2.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig935.2.1
Unique Nameprot_H-akashiwo_Contig935.2.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length268
Homology
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT)

HSP 1 Score: 157 bits (396), Expect = 9.850e-43
Identity = 92/265 (34.72%), Postives = 149/265 (56.23%), Query Frame = 0
Query:    3 LVSEFSHEKLRPTNIPLSHSTMKEINEAKGEPLDE--AHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVY-EDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 264
            ++  F  E+ +P + PL     K   E    P DE   + +E++  IG L ++  ATRPD+A A+ ILS+ +SKP   HW     +L Y+K T N G+ F+           ++  Y DAD A   +  +STSG +  INGS + W SK+Q  + RST E+E +AL    + + ++  +L++IG + D+P++  EDN   I +     ++ RTKH+ +  +++++KV     N+++CST KMLAD++TK  PR  F K R  ++V
Sbjct:   49 ILKRFGMEQCKPVSTPLEPG--KHFQEL---PDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEG-----KSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTKSLPRQTFQKFRDMLNV 303          
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 163 bits (413), Expect = 5.240e-42
Identity = 95/263 (36.12%), Postives = 154/263 (58.56%), Query Frame = 0
Query:    3 LVSEFSHEKLRPTNIPLSHSTMKEINEAKGEPLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVY-EDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 264
            ++  F+ E+ +P + PL     K+ +E   +    A+IHE++  IG L ++  ATRPD+A A+ ILS+ ++KP   HWK +  +L Y+KGT N GI F+  +         ++ Y DAD A   E  +STSG +  I+G  I W SKKQS ++RS+ E+E +AL L  +   ++  +L+ IG++  +  V  EDN + I +     ++ RTKH+ +  +++++KV     ++ +C T +MLADILTK  PR  F KLR ++ V
Sbjct: 1095 VLKRFNMEECKPVSTPLEPG--KQFHELSDDERP-ANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKD-----QTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVAFHFVREKVQDKSIDVVYCRTDEMLADILTKGLPRQTFEKLRKQLCV 1349          
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A6G0JWZ0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JWZ0_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.080e-39
Identity = 86/236 (36.44%), Postives = 139/236 (58.90%), Query Frame = 0
Query:   34 PLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNV----YEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSVV 265
            P+++  +   R AIG L WI+  TRPDI  A+  L+R +++P   HW+ + L+L YL+GT + G+ FK+      K   + +++ DAD A    D KS SG ++ +NG +I W SKKQ ++A ST+E+E +A  + VK   +I  +L EIG+   K NV      DN S I  +     + R+KH+ ++ +Y++D +     ++ +C T + LADILT+P  R+ F +LR ++ VV
Sbjct:   82 PMEQTSL--MRRAIGSLLWISNCTRPDITAAVNYLARFVARPCEDHWRGMKLILRYLRGTTSLGLLFKRDQGIGCK--WHATIFSDADWAGEKSDVKSVSGAVLVLNGMVIAWSSKKQISVALSTMEAEYVAAAMAVKEAAWIKQLLVEIGLW--KANVAVSLQADNQSAIKSMENEMTSARSKHINVRYHYIRDVIARGDVSVSYCPTQQQLADILTRPLQRVVFERLREQLRVV 311          
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A6A3TV31_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3TV31_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.310e-39
Identity = 82/231 (35.50%), Postives = 140/231 (60.61%), Query Frame = 0
Query:   29 EAKGEPLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVYE-DNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKL 258
            +A+  PL       +R  +G L ++A  TRP I+ +M +LS+ L K    HW A I +L YLKGT    + FK+G+   +KN+  +S +CDA+        +STSG+++ ++G+ +++ SK+QS++A ST E+E +AL L  + LE++  +LDEIG++  +P + + DN + I I +  GY+ R KH+ ++L++++D V   +  + + ++   LAD LTKP     F KL
Sbjct:   48 QAEAAPLSSTK--PYRELVGSLLYVANCTRPYISVSMSMLSQYLDKAQDFHWHAAIRVLRYLKGTSKMALVFKRGS---SKNVA-VSAFCDANWGGDLATRRSTSGVLVLMDGAPVIFKSKRQSSVALSTAETEYMALALTTQELEWLRQLLDEIGMQVARPMLIKVDNQAAISIAHNCGYSPRAKHIDLRLHFIRDHVEAGHIAVEYIASVAQLADYLTKPLATPQFAKL 272          
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A803NJW7_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NJW7_CANSA)

HSP 1 Score: 144 bits (364), Expect = 6.920e-39
Identity = 81/223 (36.32%), Postives = 131/223 (58.74%), Query Frame = 0
Query:   43 FRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIR-YDKPNVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 264
            ++S IG L ++   TRPDI++A+  LS+ L  P   HW A   LL YL GT N G+ F+          L ++ Y DAD A+  ED +STSG  +++ G+LI+W S+KQ  +ARS+ ESE  A+ L    L +I  +  E+ I+ +  P ++ DN+    + +   +++RTKH+ + L++++DKV+    ++ H S     A ILTKP P++ F K R K+++
Sbjct:    7 YKSFIGALQYLT-LTRPDISFAVNKLSQYLKSPTHEHWLACKRLLRYLVGTINYGLHFRPAAT------LQLTAYTDADWASSIEDRRSTSGYCVYLGGNLIMWSSRKQIVVARSSTESEYRAIALATTELVWIQSLFSELNIQLHSCPILWCDNLRATSLASNRVFHQRTKHIEVDLHFVRDKVLDHTLDIRHLSVDHQTAYILTKPLPQVQFAKFRDKLTL 222          
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A0J7KFI3_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KFI3_LASNI)

HSP 1 Score: 149 bits (376), Expect = 1.840e-38
Identity = 85/240 (35.42%), Postives = 136/240 (56.67%), Query Frame = 0
Query:   25 KEINEAKGEPLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPN-VYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMS 263
            + INE + + ++EA +  +R  IG L ++A  TRPDI+Y +  LS+ L  P   HW A   +L YLKG+   G+ F  G     KN+  I+ Y DAD A   +  +STSG+++ +NG  ++W S+KQ  +A ST ++E +A     K + +  G+LD +G+   KP  +Y DN++   ++    +++RTKHM IK ++ +D V      L H  +T   AD+LTKP  +  FL  R  ++
Sbjct:  218 RNINE-ENQSIEEARV-PYRQLIGSLMYLAVGTRPDISYIVNKLSQFLEHPSNIHWSAAKRILKYLKGSATLGLKF--GTPTETKNI--ITAYSDADYAACIDSRRSTSGVVVMLNGGPVIWSSRKQGIVATSTTDAEYMAAHEAAKEIVWAKGLLDSLGVNQTKPTKLYLDNVAAECLIKNSAFHKRTKHMDIKFHFTRDLVNQKKIELIHVVSTNQKADMLTKPLVKEKFLNNRNLIN 451          
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A6P4MWD8_GOSAR (uncharacterized mitochondrial protein AtMg00810-like n=2 Tax=Gossypium TaxID=3633 RepID=A0A6P4MWD8_GOSAR)

HSP 1 Score: 148 bits (373), Expect = 3.810e-38
Identity = 94/265 (35.47%), Postives = 151/265 (56.98%), Query Frame = 0
Query:    3 LVSEFSHEKLRPTNIPLSHSTMKEINEAKGEPLDEAHIHE--FRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKP-NVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 264
            L++E      +P + P+      E+N   G+ L++A + +  ++  +GKL +++  TRPDIAYA+ ++S+ +  P   H +A+  +L YLKGTP  GI FKKG        L +  Y DAD A    D +STSG   F+ G+L+ W SKKQ+ +ARS+ E+E  A+ LG+  L ++  IL+++ I+++ P  +Y DN S I I +    + RTKH+ +  +++K+K+ +        ST   LADILTK      F KL  K+ +
Sbjct:  181 LLTETGKLGCKPADTPI------EVNHRLGDALEDAAVDKSSYQRLVGKLIYLSH-TRPDIAYAVGVVSQFMHNPKESHLRAMYQILQYLKGTPGKGILFKKGEN------LTLEAYTDADYAGSMVDRRSTSGYCTFLGGNLVTWRSKKQNVVARSSAEAEFRAMALGICELLWLKIILEDLKIKWEGPMKLYCDNKSAINIAHNPVQHDRTKHVEVDRHFIKEKLDSGLICTPFVSTDGQLADILTKGLSGKLFQKLVSKLRM 432          
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A1Q3B3F9_CEPFO (Uncharacterized protein (Fragment) n=8 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3B3F9_CEPFO)

HSP 1 Score: 140 bits (354), Expect = 8.100e-37
Identity = 80/218 (36.70%), Postives = 129/218 (59.17%), Query Frame = 0
Query:   32 GEPLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKP-NVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTK 248
            G PL +  +H++RS IGKL ++   TRPDI++A+ +LS  +  P   HW A I +L YLK  P  G+ ++      N+++ ++  Y DAD A    D +ST+G   F+ G+L+ W SKKQ+T+ARS+ E+E  A+      L ++  +L E+G+   KP  ++ DN + IYI +   Y+ RTKH+ +  ++++D VM         S++  LAD+LTK
Sbjct:   48 GSPLTD--VHQYRSLIGKLIYLT-VTRPDISFAVGVLSHFMQAPQKAHWDAAIRILRYLKSAPGKGLIYRP-----NRHM-DLVAYSDADWAGSASDRRSTTGYCTFVGGNLVSWRSKKQTTVARSSAETEYRAMAHTTAELMWLRSLLLEMGLLVSKPMKMFCDNQAAIYIASNPVYHERTKHIEVDCHFVRDAVMKKLVETPFVSSSGQLADVLTK 256          
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: X1WLH4_ACYPI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WLH4_ACYPI)

HSP 1 Score: 144 bits (364), Expect = 1.790e-36
Identity = 78/229 (34.06%), Postives = 130/229 (56.77%), Query Frame = 0
Query:   37 EAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFI-IGILDEIGIRYDKPNVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 264
            EA    +R ++G L +++  TRPDI +A+ ++SR L KP T HW A+  +  YLKGT N G+ +             +  Y DAD A      +STSG +  +   ++ W S++Q ++A ST E+E +AL   ++ L ++ + I D +  + D P +Y DN S I ++    Y++RTKH+ ++ +Y+++K     F+L +  + + LADILTKP PR  F +LR  + +
Sbjct:  262 EAGEVPYRESVGSLLYLSQITRPDITFAVNLVSRYLEKPLTIHWNAVKRIFKYLKGTFNYGLIYDASVTP------KLRGYSDADYAGDTTTRRSTSGFIFMMGDGIVAWCSQRQKSVALSTTEAEYIALSQSIQKLTWLTLLISDLLETQGDTPVLYADNQSAIKLVKNPEYHKRTKHIDVRYHYIREKFSEGMFSLEYVPSKEQLADILTKPTPRPRFQELREMLGI 484          
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: UPI000D62F353 (uncharacterized protein LOC112497935 n=1 Tax=Citrus sinensis TaxID=2711 RepID=UPI000D62F353)

HSP 1 Score: 141 bits (355), Expect = 2.080e-36
Identity = 82/224 (36.61%), Postives = 132/224 (58.93%), Query Frame = 0
Query:   43 FRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKP-NVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSVV 265
            ++  +GKL +++  TRPDIA+A+ ++S+ +  P   H +A+  +L YLK TP  G+ FKK N       L + +Y DAD A    D +STSG   F+ G+L+ W SKKQS +ARS+ E+E  A+  G+  L ++  +L+E+ I  D P  +Y DN + I I +   ++ RTKH+ +  +++K+K+ +    +    TTK LADILTK   +  F  L  K+ ++
Sbjct:  112 YQRLVGKLIYLSH-TRPDIAFAVSVISQFMHSPCKEHLEAVYKVLKYLKKTPGKGLLFKKNNN------LQVEVYTDADWAGSVIDRRSTSGYCTFVGGNLVTWRSKKQSVVARSSAEAEFRAVAHGICELLWLKKLLEELKIIIDVPMKLYCDNKAAINIAHNPVHHDRTKHVEVDRHFIKEKIESGLICMTFVPTTKQLADILTKGLHKSSFESLTSKLGMI 328          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9D5L2_PARCT9.850e-4334.72Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A7D9IUY0_PARCT5.240e-4236.12Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6G0JWZ0_9STRA2.080e-3936.44Uncharacterized protein n=3 Tax=Phytophthora fraga... [more]
A0A6A3TV31_9STRA4.310e-3935.50Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A803NJW7_CANSA6.920e-3936.32Uncharacterized protein n=1 Tax=Cannabis sativa Ta... [more]
A0A0J7KFI3_LASNI1.840e-3835.42Retrovirus-related pol polyprotein from transposon... [more]
A0A6P4MWD8_GOSAR3.810e-3835.47uncharacterized mitochondrial protein AtMg00810-li... [more]
A0A1Q3B3F9_CEPFO8.100e-3736.70Uncharacterized protein (Fragment) n=8 Tax=Cephalo... [more]
X1WLH4_ACYPI1.790e-3634.06Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000D62F3532.080e-3636.61uncharacterized protein LOC112497935 n=1 Tax=Citru... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 116..253
e-value: 7.00925E-50
score: 159.171
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 39..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig935contigH-akashiwo_Contig935:103274..104077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig935.2.1mRNA_H-akashiwo_Contig935.2.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig935 103274..104077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig935.2.1 ID=prot_H-akashiwo_Contig935.2.1|Name=mRNA_H-akashiwo_Contig935.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=268bp
MALVSEFSHEKLRPTNIPLSHSTMKEINEAKGEPLDEAHIHEFRSAIGKL
NWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICF
KKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKK
QSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVYEDNMSLI
YILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQ
PRIPFLKLRGKMSVVIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043502DNA/RNA_pol_sf