mRNA_H-akashiwo_Contig935.2.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT) HSP 1 Score: 157 bits (396), Expect = 9.850e-43 Identity = 92/265 (34.72%), Postives = 149/265 (56.23%), Query Frame = 1 Query: 7 LVSEFSHEKLRPTNIPLSHSTMKEINEAKGEPLDE--AHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVY-EDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 792 ++ F E+ +P + PL K E P DE + +E++ IG L ++ ATRPD+A A+ ILS+ +SKP HW +L Y+K T N G+ F+ ++ Y DAD A + +STSG + INGS + W SK+Q + RST E+E +AL + + ++ +L++IG + D+P++ EDN I + ++ RTKH+ + +++++KV N+++CST KMLAD++TK PR F K R ++V Sbjct: 49 ILKRFGMEQCKPVSTPLEPG--KHFQEL---PDDENPTNTNEYQKLIGCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEG-----KSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTKSLPRQTFQKFRDMLNV 303
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT) HSP 1 Score: 163 bits (413), Expect = 5.240e-42 Identity = 95/263 (36.12%), Postives = 154/263 (58.56%), Query Frame = 1 Query: 7 LVSEFSHEKLRPTNIPLSHSTMKEINEAKGEPLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVY-EDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 792 ++ F+ E+ +P + PL K+ +E + A+IHE++ IG L ++ ATRPD+A A+ ILS+ ++KP HWK + +L Y+KGT N GI F+ + ++ Y DAD A E +STSG + I+G I W SKKQS ++RS+ E+E +AL L + ++ +L+ IG++ + V EDN + I + ++ RTKH+ + +++++KV ++ +C T +MLADILTK PR F KLR ++ V Sbjct: 1095 VLKRFNMEECKPVSTPLEPG--KQFHELSDDERP-ANIHEYQKIIGCLTYVTTATRPDLAAAVGILSKYMTKPSQEHWKGVKRILRYIKGTLNFGITFQAKD-----QTCILTGYSDADWANDTETRRSTSGYIFQISGCTISWCSKKQSCVSRSSTEAEYMALSLATQEAIWLRRLLENIGVKQKESTVMCEDNQAAIQLSRNPKFHNRTKHIDVAFHFVREKVQDKSIDVVYCRTDEMLADILTKGLPRQTFEKLRKQLCV 1349
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A6G0JWZ0_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JWZ0_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.080e-39 Identity = 86/236 (36.44%), Postives = 139/236 (58.90%), Query Frame = 1 Query: 100 PLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNV----YEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSVV 795 P+++ + R AIG L WI+ TRPDI A+ L+R +++P HW+ + L+L YL+GT + G+ FK+ K + +++ DAD A D KS SG ++ +NG +I W SKKQ ++A ST+E+E +A + VK +I +L EIG+ K NV DN S I + + R+KH+ ++ +Y++D + ++ +C T + LADILT+P R+ F +LR ++ VV Sbjct: 82 PMEQTSL--MRRAIGSLLWISNCTRPDITAAVNYLARFVARPCEDHWRGMKLILRYLRGTTSLGLLFKRDQGIGCK--WHATIFSDADWAGEKSDVKSVSGAVLVLNGMVIAWSSKKQISVALSTMEAEYVAAAMAVKEAAWIKQLLVEIGLW--KANVAVSLQADNQSAIKSMENEMTSARSKHINVRYHYIRDVIARGDVSVSYCPTQQQLADILTRPLQRVVFERLREQLRVV 311
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A6A3TV31_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3TV31_9STRA) HSP 1 Score: 147 bits (370), Expect = 4.310e-39 Identity = 82/231 (35.50%), Postives = 140/231 (60.61%), Query Frame = 1 Query: 85 EAKGEPLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPNVYE-DNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKL 774 +A+ PL +R +G L ++A TRP I+ +M +LS+ L K HW A I +L YLKGT + FK+G+ +KN+ +S +CDA+ +STSG+++ ++G+ +++ SK+QS++A ST E+E +AL L + LE++ +LDEIG++ +P + + DN + I I + GY+ R KH+ ++L++++D V + + + ++ LAD LTKP F KL Sbjct: 48 QAEAAPLSSTK--PYRELVGSLLYVANCTRPYISVSMSMLSQYLDKAQDFHWHAAIRVLRYLKGTSKMALVFKRGS---SKNVA-VSAFCDANWGGDLATRRSTSGVLVLMDGAPVIFKSKRQSSVALSTAETEYMALALTTQELEWLRQLLDEIGMQVARPMLIKVDNQAAISIAHNCGYSPRAKHIDLRLHFIRDHVEAGHIAVEYIASVAQLADYLTKPLATPQFAKL 272
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A803NJW7_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803NJW7_CANSA) HSP 1 Score: 144 bits (364), Expect = 6.920e-39 Identity = 81/223 (36.32%), Postives = 131/223 (58.74%), Query Frame = 1 Query: 127 FRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIR-YDKPNVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 792 ++S IG L ++ TRPDI++A+ LS+ L P HW A LL YL GT N G+ F+ L ++ Y DAD A+ ED +STSG +++ G+LI+W S+KQ +ARS+ ESE A+ L L +I + E+ I+ + P ++ DN+ + + +++RTKH+ + L++++DKV+ ++ H S A ILTKP P++ F K R K+++ Sbjct: 7 YKSFIGALQYLT-LTRPDISFAVNKLSQYLKSPTHEHWLACKRLLRYLVGTINYGLHFRPAAT------LQLTAYTDADWASSIEDRRSTSGYCVYLGGNLIMWSSRKQIVVARSSTESEYRAIALATTELVWIQSLFSELNIQLHSCPILWCDNLRATSLASNRVFHQRTKHIEVDLHFVRDKVLDHTLDIRHLSVDHQTAYILTKPLPQVQFAKFRDKLTL 222
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A0J7KFI3_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KFI3_LASNI) HSP 1 Score: 149 bits (376), Expect = 1.840e-38 Identity = 85/240 (35.42%), Postives = 136/240 (56.67%), Query Frame = 1 Query: 73 KEINEAKGEPLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKPN-VYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMS 789 + INE + + ++EA + +R IG L ++A TRPDI+Y + LS+ L P HW A +L YLKG+ G+ F G KN+ I+ Y DAD A + +STSG+++ +NG ++W S+KQ +A ST ++E +A K + + G+LD +G+ KP +Y DN++ ++ +++RTKHM IK ++ +D V L H +T AD+LTKP + FL R ++ Sbjct: 218 RNINE-ENQSIEEARV-PYRQLIGSLMYLAVGTRPDISYIVNKLSQFLEHPSNIHWSAAKRILKYLKGSATLGLKF--GTPTETKNI--ITAYSDADYAACIDSRRSTSGVVVMLNGGPVIWSSRKQGIVATSTTDAEYMAAHEAAKEIVWAKGLLDSLGVNQTKPTKLYLDNVAAECLIKNSAFHKRTKHMDIKFHFTRDLVNQKKIELIHVVSTNQKADMLTKPLVKEKFLNNRNLIN 451
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A6P4MWD8_GOSAR (uncharacterized mitochondrial protein AtMg00810-like n=2 Tax=Gossypium TaxID=3633 RepID=A0A6P4MWD8_GOSAR) HSP 1 Score: 148 bits (373), Expect = 3.810e-38 Identity = 94/265 (35.47%), Postives = 151/265 (56.98%), Query Frame = 1 Query: 7 LVSEFSHEKLRPTNIPLSHSTMKEINEAKGEPLDEAHIHE--FRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKP-NVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 792 L++E +P + P+ E+N G+ L++A + + ++ +GKL +++ TRPDIAYA+ ++S+ + P H +A+ +L YLKGTP GI FKKG L + Y DAD A D +STSG F+ G+L+ W SKKQ+ +ARS+ E+E A+ LG+ L ++ IL+++ I+++ P +Y DN S I I + + RTKH+ + +++K+K+ + ST LADILTK F KL K+ + Sbjct: 181 LLTETGKLGCKPADTPI------EVNHRLGDALEDAAVDKSSYQRLVGKLIYLSH-TRPDIAYAVGVVSQFMHNPKESHLRAMYQILQYLKGTPGKGILFKKGEN------LTLEAYTDADYAGSMVDRRSTSGYCTFLGGNLVTWRSKKQNVVARSSAEAEFRAMALGICELLWLKIILEDLKIKWEGPMKLYCDNKSAINIAHNPVQHDRTKHVEVDRHFIKEKLDSGLICTPFVSTDGQLADILTKGLSGKLFQKLVSKLRM 432
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: A0A1Q3B3F9_CEPFO (Uncharacterized protein (Fragment) n=8 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3B3F9_CEPFO) HSP 1 Score: 140 bits (354), Expect = 8.100e-37 Identity = 80/218 (36.70%), Postives = 129/218 (59.17%), Query Frame = 1 Query: 94 GEPLDEAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKP-NVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTK 744 G PL + +H++RS IGKL ++ TRPDI++A+ +LS + P HW A I +L YLK P G+ ++ N+++ ++ Y DAD A D +ST+G F+ G+L+ W SKKQ+T+ARS+ E+E A+ L ++ +L E+G+ KP ++ DN + IYI + Y+ RTKH+ + ++++D VM S++ LAD+LTK Sbjct: 48 GSPLTD--VHQYRSLIGKLIYLT-VTRPDISFAVGVLSHFMQAPQKAHWDAAIRILRYLKSAPGKGLIYRP-----NRHM-DLVAYSDADWAGSASDRRSTTGYCTFVGGNLVSWRSKKQTTVARSSAETEYRAMAHTTAELMWLRSLLLEMGLLVSKPMKMFCDNQAAIYIASNPVYHERTKHIEVDCHFVRDAVMKKLVETPFVSSSGQLADVLTK 256
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: X1WLH4_ACYPI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1WLH4_ACYPI) HSP 1 Score: 144 bits (364), Expect = 1.790e-36 Identity = 78/229 (34.06%), Postives = 130/229 (56.77%), Query Frame = 1 Query: 109 EAHIHEFRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFI-IGILDEIGIRYDKPNVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSV 792 EA +R ++G L +++ TRPDI +A+ ++SR L KP T HW A+ + YLKGT N G+ + + Y DAD A +STSG + + ++ W S++Q ++A ST E+E +AL ++ L ++ + I D + + D P +Y DN S I ++ Y++RTKH+ ++ +Y+++K F+L + + + LADILTKP PR F +LR + + Sbjct: 262 EAGEVPYRESVGSLLYLSQITRPDITFAVNLVSRYLEKPLTIHWNAVKRIFKYLKGTFNYGLIYDASVTP------KLRGYSDADYAGDTTTRRSTSGFIFMMGDGIVAWCSQRQKSVALSTTEAEYIALSQSIQKLTWLTLLISDLLETQGDTPVLYADNQSAIKLVKNPEYHKRTKHIDVRYHYIREKFSEGMFSLEYVPSKEQLADILTKPTPRPRFQELREMLGI 484
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Match: UPI000D62F353 (uncharacterized protein LOC112497935 n=1 Tax=Citrus sinensis TaxID=2711 RepID=UPI000D62F353) HSP 1 Score: 141 bits (355), Expect = 2.080e-36 Identity = 82/224 (36.61%), Postives = 132/224 (58.93%), Query Frame = 1 Query: 127 FRSAIGKLNWIAGATRPDIAYAMQILSRGLSKPFTHHWKALILLLGYLKGTPNAGICFKKGNLDFNKNLLNISMYCDADLATVHEDTKSTSGIMIFINGSLIVWLSKKQSTIARSTVESEALALDLGVKMLEFIIGILDEIGIRYDKP-NVYEDNMSLIYILNGFGYNRRTKHMLIKLNYLKDKVMTDYFNLHHCSTTKMLADILTKPQPRIPFLKLRGKMSVV 795 ++ +GKL +++ TRPDIA+A+ ++S+ + P H +A+ +L YLK TP G+ FKK N L + +Y DAD A D +STSG F+ G+L+ W SKKQS +ARS+ E+E A+ G+ L ++ +L+E+ I D P +Y DN + I I + ++ RTKH+ + +++K+K+ + + TTK LADILTK + F L K+ ++ Sbjct: 112 YQRLVGKLIYLSH-TRPDIAFAVSVISQFMHSPCKEHLEAVYKVLKYLKKTPGKGLLFKKNNN------LQVEVYTDADWAGSVIDRRSTSGYCTFVGGNLVTWRSKKQSVVARSSAEAEFRAVAHGICELLWLKKLLEELKIIIDVPMKLYCDNKAAINIAHNPVHHDRTKHVEVDRHFIKEKIESGLICMTFVPTTKQLADILTKGLHKSSFESLTSKLGMI 328 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig935.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig935.2.1 >prot_H-akashiwo_Contig935.2.1 ID=prot_H-akashiwo_Contig935.2.1|Name=mRNA_H-akashiwo_Contig935.2.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=268bp MALVSEFSHEKLRPTNIPLSHSTMKEINEAKGEPLDEAHIHEFRSAIGKLback to top mRNA from alignment at H-akashiwo_Contig935:103274..104077- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig935.2.1 ID=mRNA_H-akashiwo_Contig935.2.1|Name=mRNA_H-akashiwo_Contig935.2.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=804bp|location=Sequence derived from alignment at H-akashiwo_Contig935:103274..104077- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig935:103274..104077- >mRNA_H-akashiwo_Contig935.2.1 ID=mRNA_H-akashiwo_Contig935.2.1|Name=mRNA_H-akashiwo_Contig935.2.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=804bp|location=Sequence derived from alignment at H-akashiwo_Contig935:103274..104077- (Heterosigma akashiwo CCMP452)back to top |