Homology
BLAST of mRNA_H-akashiwo_Contig93.59.1 vs. uniprot
Match: A0A7S3UT08_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT08_HETAK) HSP 1 Score: 106 bits (264), Expect = 1.320e-27 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 Query: 1 AGGPIHGDPKPEVQFVDDHEDDMRPVLLPFSSTTDIDIEEHDTIFANYD 147
AGGPIHGDPKPEVQFVDDHEDDMRPVLLPFSSTTDIDIEEHDTIFANYD
Sbjct: 76 AGGPIHGDPKPEVQFVDDHEDDMRPVLLPFSSTTDIDIEEHDTIFANYD 124
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 148 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 147 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1681388046.7430477-CDS-H-akashiwo_Contig93:1677148..1677253 | 1681388046.7430477-CDS-H-akashiwo_Contig93:1677148..1677253 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig93 1677149..1677253 - |
| 1681388046.7529652-CDS-H-akashiwo_Contig93:1684238..1684280 | 1681388046.7529652-CDS-H-akashiwo_Contig93:1684238..1684280 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig93 1684239..1684280 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig93.59.1 >prot_H-akashiwo_Contig93.59.1 ID=prot_H-akashiwo_Contig93.59.1|Name=mRNA_H-akashiwo_Contig93.59.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=49bp
AGGPIHGDPKPEVQFVDDHEDDMRPVLLPFSSTTDIDIEEHDTIFANYD back to topmRNA from alignment at H-akashiwo_Contig93:1677148..1684280- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig93.59.1 ID=mRNA_H-akashiwo_Contig93.59.1|Name=mRNA_H-akashiwo_Contig93.59.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=7133bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1677148..1684280- (Heterosigma akashiwo CCMP452)
GCGGGAGGGCCTATACACGGGGACCCCAAGCCCGAGGTCCAGGTGAGGGC
CTACACATGATAATTCATATAAGGTATGTACAGGTGAGGGAGGGCCTACA
CACGGGCACGGGCAGGGGGGGGCGAAGGGGCGGGGCGGGGCGCGGGGCCA
GAAGGGCGTCTGCAGGGGACGCTCAGTGCTCGTGTGCGCTGGGGACTCTT
CGGCGCCAAGCACACCCTGCAGCCTCCGTGCAGATCGGGACATATATACA
CAGCAGCTTTATCAAGGGATGGTTAGTGTGTAGAGGGCGTGCAAGTTTGA
AGCTTAGATGAAGGCCTGCTGCCAACATCAACATCTATGTCCACTGTTGT
GCATCAAAAAACGAACTGTGAAAGATGATACTGACATCTCTGCGATAATA
TATGTCAAGTTCGATTCTTTCTTCCTTTCTCTCTCTCTTTTTTTTTTTCG
TGCGCTCTGAGTCAGTCGAAACTTCCTATAGATCGGTATGAGTACTTCCC
TCCTTCCTCCTCTCCTCTTCTTAGAATTTGACTCCACCACCAAGTGTCAA
AGGGTCGATCGCGTCACCATACAGAAATGTCTCCGTAACGCTCAAATGAC
ATGAGCAGCGATATCATGAGCCATTGCAGCTAGTTCTCCATTGGCGCAGA
CTGCGTACGTTTGTTTGCAACTTATGCCTTTGATGACGTAAGACCGCTCC
GCTTCCAGCTTGCCTCTCAGAGTGAAGCACAGCGGCTTTGCCGGCTACTT
GCAAGTTGAGCTGCTGCTGCTGCAGATCTCATAATACCCCTCGTCTCTCT
CTTCTTTGCAATAAAGAAATCCACTCCGCTTGGTTTTCCTAGGCTCTGCC
TTTGGATGATTGTTGGGCGAGCACCATCTAATACAGGCCCCGAGAATACT
TTTGAAAATTTACCCGTAGAGTGCTACGGGTAAATATGGCCAGTTTTTCA
AAATTTACCCGTAGAGCCAAAAATTTACCCGTAGAGGTCAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGTGCTGGAGAGGCCAGGGTACATGAAAAA
CGATACTGATTAGATTTTTTTTATCACACTTACAACCCTACACCACCCAC
ACACACAAAAAAAAAAAATCAGTCAATCATCCTATCCTCCTGCCCATTCC
TTCCATCCTTCGCCATCCGCTCTTCTTCAACTTTTCCTCTTCCTTGTCCT
TGTGGTATCCTGGGGGTAACTTTTTCTAAGGTTGCCAATGAGAGGCACTC
TCACTTTGCCGATGGTAAACTTGGTTTTGCCAGTCTTGGGCTTCTCGCTC
AGCTTTCTCCACATCTCAATGACCTGGCTTACATCTCAATGATCAGCATC
CAGCTTGCTCTCATCAGTCCAACAGGGCCTGACAGGGTGGAAATACTTCT
TGTTCTGGGGAAGGTCAGATACTGCCTCATTAGTATGTGAGGGTTCTTCG
CGTGCTTCTCCACCAGAGGAGCTGCCACCCTTTGAAATTTCATCCCTGTT
TGCCCTATCATCTACAATAGTTGCCCGAAGTCGATTTGTACTCATCCCCA
AGGCATTGAGGGCGGCGTCACGGTAGTTGGTTGGAGGAGAGTTTTCGCTA
CGAGGAACTGCACCACTTGCGGAACCTCCTCAAGATGACGATGCCATCAC
CAAGAAAGAAGACATAGGCTTCTGGACCATTTTTTTAGCTTTCTTCGAGA
CTCTGGGGGCCATTATTCTTAAAGCAGGACTTTGACGAGAAAAGGATAAG
TTGCGAACAAATGTTTTTTCTTCTGTGATTCGACTGATTGCTGACTGCTG
CGGTGGTGTGGTGGTGGTGGTGGGTGGTGGTGGTGGTGGGTGGTGGGTTG
GTGGTGGTGGTAGTCGCCCGTGGGCAAGATGATTCCTTCCTCTTCTTCCC
TCTAATATTTTTTCGATTGGCCAAACATTTTATTTTATAACAAAATAATC
TTTTGATTGGATATACAAATACTTTTTGACCAATCGATCTGAGTCATCTA
ATAATTAATTTTATATATACAATTGTTTTACCCACAAAATTTAAATGTTT
CGACAATTTTTTTACCGTGGGCCGCCACGGGTAAATATCTCTGGTTTGAA
ATTCACCCGTAGCAGCTCAAAATTCACCCGTAATTACGGGCCAACGGGTA
GTATTCTCGGGGCCTGTAATAGTGTATTGATGATCGGTGGGCGAGCACCA
CCAGCCAGTACGGCTGTCTGTGAAACGCAGTGTACGCAGCACCAAATCTA
AGAAGACTCAAAAACCTTTTGGTGAAGGACATACATTGATTTTTGCTGAT
CTCCTCCCTCTCGCATTCCCGGACGATCAAAGATGTAGATACATGTATAA
ACACATCTTGGTATTTTATTTAATTTAACCAAAAAAAATTACGCCTTGCA
TTCTGGTATCATTCCTTTACACATACCTACTATCACAACCTGAATACTAT
TATAAGGCTGCCACACAAGGAACAGGTGCTCACTGGTGACATACAAAAGG
AGCAACAGAGCAAGAATCCCAGAGATATGGAACAGCCTCGATCATGAAAC
TCTTCAACAGCAGCGCATAGAAGGTTTCATCCCACTCAGAAAGCAGCTTC
AACGTCATATTGTCTCCCAGGCACATCAGAAGTCTTAGAAAAAGAAGAAA
AGAAAAAAAAAATGGAAAGAAAAATGCAAATGACATGAGCTGAGGGAGAG
ACGCGAGTGGAGCCCGCATCTCAGGTTTGTCAGGGAGACTCTGGAGGTAG
CAGGAGTGGACTTGCAGTGGATATTTGAGAGGAAAATGCTGGACCATGAG
CTGCCGTACCCGCTGCTCAGGAAGGCGGTGTAGGTCACCCTGGGCTCGCG
GGAGGCATTAGCGGAGGGGCTGCTGGAGGGGACGAGGGGTGGCAGGATCT
TCACGGATGGGTCAAAGTTGGAGGACGGCTCGGTGGGGGCGGCTTTCGTG
GCATTCAACAGGAGAGGAAGGGAGGTCGGGAGGGGGCTGTATCGGCTACC
ACACCACTACTGCATGGTGTACCAGGCGGAGGGGCTGGCGCAGAGGGAAT
CGGTGCGCTGGACCAAGGGCCAGGGAGGGGCGGCGAGTGGATAGTGGCAT
CGGACTTGTAAGCTCCTCTAGCTTGCTTGAAGAGCGGACGGGGAATGACA
CTCCTGGTGAGTGAGATAGGGCAGGAGGTGGTGGAGCGACATCGTTTGTG
TACATCTTGGGTCACCAGGGGCATGAGGGGAATGAAGTGGCGGACCAGCT
GGCGAAGGAAGCGGCGAATGCAGGGATATAGAGGTGGAGGTGGATGTGCC
GAGAGCCTTCACAAGGAGGCTGGCGAAGGAGTAGACGTGGAGGGTGTGAG
CATTTTTTTTTTTTGTATACGTTCTACTTGCAATGCGTTCCTTCACATCC
TGAACCACACAACCACCGTCTATTTGCAGGCTGCCTTGACATCTGATGCA
TTTCTTCGAGCTAAGTGTGATTACTGACCAACCGAAGTTCCAGCTATCCT
TAACCCTACATGCTCTATTGTCCTTGGCCTCATCTCCCTCTTTCAGTTGT
CTCTACCGTGGGCGCTTCCTCCGACAACTCACATCCATCGACGAGTGCAT
CTTCTCCTTCCCGGGTCGAGGGTGTATCATCTAGACAGACGCAGTCACCC
TCTCGTTTCGGAGCACGAGTGTGCTCCTTCCTAGCCCGTTTTTCAAGCTT
ATGGAATGTAACTTCCACAAGCCGGCCTCATGAACAGTAGGTAGTGCTCA
TGTTTCAACAACCGCCACTTGTGTGGATCATCGATCGTCTACAGCTAACG
CGAGGACATTCCGCGCAGCCCCCAGAGAAATTTTCCAAGGAATTCTCGCA
TGTTCCGAAGAACTTTCCAATTCCTGGAATTTTCACTGAGTAAGCGCCCG
CCAGCGATAGACCTCGTTTCTTTCAACACGGAAATAGGAGTGGAGACATC
TAGAGCATGGGTCGGGGATGGACATAGGAGAGGATAAGGCGTATCTGCAA
TTTGCTCCTACGTTGGATGACATCAAAGAGGCTGCCTGGAAGGGGGGGAA
GGCCGGGGGCCATCGGGTGCTTCAGGGACTGTCAGGGCATTGCAACCTTG
CGGAGCATGTGCACAGCCGGGGGATACGAGGCGGGGCGCAGTGCGACAAC
TGTGAGAGGGGGGAGAAAGAGGACGTGGAGCATTATCTACTTCACTGCCC
ACGATGGGGGGCGCAGTTGCAAGAGATGAGCGACCTCATTGTTCAGAATG
ATGCGCAGGCGAGTATGGCAAACATGTTGAAGGAGGTGGGGAGGCTGGCT
CAATTTGTGCGAAGCACGGGCAGACTAGACTTTTAGAAAGGCAGGGGCTT
AAGCAACAGGGGATGCTGTACTATGGCTTACGGGCTGTATTGTTTTTCTT
TTAAAGTTTTGGTGATGAGTAGGAGCGCGGGAGCTGGGGCCTAGAAGCTG
AAGGGTCCGTGTATGGAGGCCGGGACTTCGGTCCTTGTAGACATCAAAAG
GCTGGACCTCAAATGTATTAAAATCACCACCATCATCATATATATATTAT
ATATATATAATACTGAGTGCGTGTCCATGCAAGCAGTTCGCGCTCATCAA
AGCGGTGGATCTGCGCACCAGGGGCTCCAGGAAGAAGTGGAGGACTTGGG
GTTCGAGGATGGTGAGGGGATTGCCGTTCTCTTCCAGAGCTAGTGGGTTT
AGGGTTTAGTACATTACCACAGAGACATCTACATAGATGCAAGGCGTGGG
GTTTTTGGGTTAAATTTATCTCTCTCTCTCTCTCTCTCTCTCTCTTTATA
TTCATATATATATATATATATATGGGGCTTTCACGCCATGTGGAAGGAGT
TTGAGGAAGATCCGGAGGTGGAGGCGGTGTTCTTGATGGATGCTGCCAAC
GCCTTCAACAGGCTCAACCGAGAACAGGCCTTAGCAGAGGTGAGAAAGTC
CTGGCCCAGAGCTGCCCGCTTCATCTTCAACGCCTACAAGGGGTACAAGA
TGATCTTCCTAGATGGCACGGACGAGATCCTCTACAGTGAGGACGGGTGC
ACCCAGGGTGACCCGATAGCCATGCTCCTGTACGGTGTGGGAGTGAAGCC
TCTGTTCGTGGTGGTGAAGGAGAAGGTCGCCGAGGTCTTCAATGACAAGG
GTGAGAAGCTCTTCCAGGTGCTGTTTGCTGATGATTCTTCGGCGGCCGGC
AAGCTCGAGACTGTTCTGGCCTGGGTGAGAGCCTTGGTGGAGGGAGGGCC
CCAGTATGCGGCTACTTCCCTGAGCCGTCCAAGAGTGTTTTGGTGGTGAA
GGAGGGCAAGGAGGAAAGGGCCAGGGAGGTGTTCGCGGAGTACCCTGACC
TTGAGATTGTCTCTCATCACAGGTTTTTGGGCGGCTGCATTGGCGCAAGT
GCAGGGGTGGAGGCCTACGTGAGGAGGAAGGTGGCCACTTGGGTGGAGTG
TGTGCGGCACCTGGCGCGGGCGGCGGAGAAGTTCCCGCAGTCTGCGTACG
TGGCTTTCACCATGTCGCTGCAGAGTGAGTGGAAATTCCTCCAGCGTCTG
ATCCCGGGGTCCTCCGCTTGGTTCGGGGAGTTGAATGACGTGATCAAGCG
TGAGTTCATCCCTGCGCTGCTTGCCAGGCGGCAGTTCTCTGAGGCTGAGA
TGGAGCTCTTGAGCTGCCCGTCCAGGTGGGGGCTAGGCATTCTCGACCCA
ACCAAGGCCGCGCAGTCCTCCTATGAGCTGTCCTTTTCTGCCACCTCCAT
GGTGCGCCGAAGCCATCCTGGGTGACGAGCCCCTGGGCGTGCCTGGACAC
CGTGCCTATTATGCTGGCCAGCAGCGGAAGCGCAGGGGGGAGGGGGGGCG
GAGCTCAAGGCTAGGTATGAGGAGGTGCTGAGCAAGCTGAGACCGGAGCA
GAGGCAGAAGGTGCAAGGCCAGGTGGACTCCAAGGGCATGTCGTGGATGT
CTGTGGTGCCCGTGCGAAAGAGTCATTTGACTTGTCCGCCAGCAGTGGCG
CGACGGGTGCACCTCCAGTACGGGTGGGACCTTCAGGGGCTGCCTGAGAA
GTGCGATGGATGTGGCAAGCGCTTCTCCACTGACCATGCTCTCTTGTGCT
TGAAGGGGGTCTTATAGGATGGGGCCACAACCAGTTTCGGGATGTCATGG
GGAGTTCAGCCGGGCGGCCTGGAACAACTGCGGCTGGGAGCCGGTGGTGA
GGGAGGCGTCGGAGCGGGCCAGGGATGGAGGTAGCGATGGCTTGAGGGCG
GATTTTGTGGTGAGGGGTGTGTGGGAACCTGATAGGGACTGTCTTTTTGA
TACCGCATTATACATGCTGGCAGCCCTGGACGTGCAGCCCAGCACATCTC
TTACCAGAATGCCCTCAATACCTCTGCCGGGAAAAGGTGAAGTTGTACAA
GGCTGCTGCGGAAGAGCGCCGTGCTACTTTCTGCCCCTTGATAGTGACTG
TGGAGGGTATTGCCCACCAATCCTTGCAGGCCTTCCTCAGGCGCATCGCT
GCTCGGCTTTCGCGGCAAAGTGGCATAAGCCCCTCTCAACGGTCACCAAC
TGGGTGCGTGCCCGCTTGCAGTTCGCGCTCATCAAAGCGGTGGATCTGCG
GACCAGGGCTCCAGGAAGAGGTGGAGGAGCTCGGGGGTTCGAGGATGGCG
AGGATTGCCACTCTCTTCCAGAGATAGTGGGGTGTGCTGTATTTGATGTT
CTGTATTGATTTGGGTTTTGGGATTTCATGTGTAGGTTTTGGTATATTAC
CACAGGGACATCTGCATAGATGCAAGGCGTGGTTGTTTTGTTTAAATTTA
ACTCTATATTTATATATATTATATATATTTATATATATATTATACGTTAT
GATGATGATGATGATTTTAGTTTATTTCAAGTCCGCCTCTTGGATAACTA
CAAGGACCGAAGCCCCGGCCTCCATATGCGGACCCTTCCACTTCTAGGTC
CCACTTTTGCCCATAACGTTATATGTATGTAATGGAAAATACATTTGCAT
CACCTCTCATCATTATGTACCTGGCAGTTTGTTGATGACCACGAAGATGA
CATGAGGCCGGTTCTATTGCCATTCTCAAGTACAACTGACATTGACATAG
AGGAGCATGATACAATCTTCGCAAATTATGATG back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig93:1677148..1684280- >mRNA_H-akashiwo_Contig93.59.1 ID=mRNA_H-akashiwo_Contig93.59.1|Name=mRNA_H-akashiwo_Contig93.59.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=147bp|location=Sequence derived from alignment at H-akashiwo_Contig93:1677148..1684280- (Heterosigma akashiwo CCMP452)
GCGGGAGGGCCTATACACGGGGACCCCAAGCCCGAGGTCCAGTTTGTTGA
TGACCACGAAGATGACATGAGGCCGGTTCTATTGCCATTCTCAAGTACAA
CTGACATTGACATAGAGGAGCATGATACAATCTTCGCAAATTATGAT back to top
|