prot_H-akashiwo_Contig9.91.1 (polypeptide) Heterosigma akashiwo CCMP452

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-akashiwo_Contig9.91.1
Unique Nameprot_H-akashiwo_Contig9.91.1
Typepolypeptide
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Sequence length152
Homology
[Close]
BLAST of mRNA_H-akashiwo_Contig9.91.1 vs. uniprot
Match: A0A7S4D941_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D941_HETAK)

HSP 1 Score: 256 bits (654), Expect = 7.970e-86
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0 
Query:    1 MATFRPTAREIFVELKSLVEEKRANDPEFSCIYRFNIKPSASWVLEVYPVQEGDSTQPCGKVFELGIDEEPNRNPDCTLTYEDEDVFIDLSTNKLSPQKAFIKRKLVIKGNMAKMRFLRELMEKGQRR 128
            MATFRPTAREIFVELKSLVEEKRANDPEFSCIYRFNIKPSASWVLEVYPVQEGDSTQPCGKVFELGIDEEPNRNPDCTLTYEDEDVFIDLSTNKLSPQKAFIKRKLVIKGNMAKMRFLRELMEKGQRR
Sbjct:    1 MATFRPTAREIFVELKSLVEEKRANDPEFSCIYRFNIKPSASWVLEVYPVQEGDSTQPCGKVFELGIDEEPNRNPDCTLTYEDEDVFIDLSTNKLSPQKAFIKRKLVIKGNMAKMRFLRELMEKGQRR 128
[Close]
BLAST of mRNA_H-akashiwo_Contig9.91.1 vs. uniprot
Match: A0A7S2V858_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V858_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.630e-39
Identity = 73/129 (56.59%), Postives = 95/129 (73.64%), Query Frame = 0 
Query:    1 MATFRPTAREIFVELKSLVEEKRANDPEFSCIYRFNIKPSASWVLEVYP--VQEGDSTQPCGKVFELGIDEE--PNRNPDCTLTYEDEDVFIDLSTNKLSPQKAFIKRKLVIKGNMAKMRFLRELMEKG 125
            MA   P+ R++F E+  +V+E R  D  F C+YRFNIKPS SW+LEVYP  V    +    GKV+E+GI+EE  P++ PDCTLTYE  +VF  L+  KLSP KAF++RKL+I+GNMAKMRFLR+LME+G
Sbjct:   17 MAQPIPSVRQMFEEMARMVDEPREQDKNFECVYRFNIKPSTSWILEVYPEPVATAFAVSSWGKVYEVGINEELPPDKKPDCTLTYESGEVFQLLAAKKLSPHKAFLRRKLLIQGNMAKMRFLRQLMERG 145
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig9.91.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S4D941_HETAK7.970e-86100.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2V858_9STRA1.630e-3956.59Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036527SCP2 sterol-binding domain superfamilyGENE3D3.30.1050.10coord: 5..124
e-value: 7.6E-17
score: 63.5
IPR036527SCP2 sterol-binding domain superfamilySUPERFAMILY55718SCP-likecoord: 7..124
IPR003033SCP2 sterol-binding domainPFAMPF02036SCP2coord: 28..122
e-value: 7.0E-11
score: 42.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig9contigH-akashiwo_Contig9:6409754..6410485 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig9.91.1mRNA_H-akashiwo_Contig9.91.1Heterosigma akashiwo CCMP452mRNAH-akashiwo_Contig9 6409754..6410485 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-akashiwo_Contig9.91.1 ID=prot_H-akashiwo_Contig9.91.1|Name=mRNA_H-akashiwo_Contig9.91.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=152bp
MATFRPTAREIFVELKSLVEEKRANDPEFSCIYRFNIKPSASWVLEVYPV
QEGDSTQPCGKVFELGIDEEPNRNPDCTLTYEDEDVFIDLSTNKLSPQKA
FIKRKLVIKGNMAKMRFLRELMEKGQRRRGAGGAAAAAAAAVLPQPKSAW
EP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036527SCP2_sterol-bd_dom_sf
IPR003033SCP2_sterol-bd_dom