mRNA_H-akashiwo_Contig9.66.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: A0A7S3XMF6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMF6_HETAK) HSP 1 Score: 159 bits (403), Expect = 2.000e-46 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 3 Query: 3 PKKCGMPSSPTCDTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICRFDRDEDN 203 PKKCGMPSSPTCDTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICRFDRDEDN Sbjct: 211 PKKCGMPSSPTCDTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICRFDRDEDN 277
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: A0A7S3XLY6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLY6_HETAK) HSP 1 Score: 159 bits (403), Expect = 4.720e-46 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 3 Query: 3 PKKCGMPSSPTCDTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICRFDRDEDN 203 PKKCGMPSSPTCDTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICRFDRDEDN Sbjct: 244 PKKCGMPSSPTCDTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICRFDRDEDN 310
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: A0A1S3WYH7_TOBAC (RING finger protein 11-like n=3 Tax=Nicotiana TaxID=4085 RepID=A0A1S3WYH7_TOBAC) HSP 1 Score: 67.0 bits (162), Expect = 1.080e-11 Identity = 25/52 (48.08%), Postives = 34/52 (65.38%), Query Frame = 3 Query: 39 DTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICRFDRD 194 D E C +C+ EYK GD++G L C+H FHL CIK+W + + CP+CR D Sbjct: 88 DEEPETCAICILEYKNGDIIGKLQCEHEFHLDCIKQWLLKKKVCPLCRASAD 139
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: Q24GF5_TETTS (Zinc finger, C3HC4 type (RING finger) protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q24GF5_TETTS) HSP 1 Score: 67.0 bits (162), Expect = 5.510e-11 Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 3 Query: 36 CDTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICR 182 CD N CP+C YK+G+++ L CQH FH C+K W +H CP+CR Sbjct: 187 CDDNENQCPICYENYKKGEVMNQLPCQHNFHQGCVKEWLNKHNSCPMCR 235
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: UPI0019D60B6B (RING-H2 finger protein ATL70-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D60B6B) HSP 1 Score: 60.1 bits (144), Expect = 6.790e-9 Identity = 25/48 (52.08%), Postives = 30/48 (62.50%), Query Frame = 3 Query: 42 TNAEFCPVCLWEYKQGDMLGALS-CQHCFHLKCIKRWFKEHQRCPICR 182 T A C VCL EY GD+L L C H FH +C+ RW + HQ CP+CR Sbjct: 91 TKAACCAVCLGEYAGGDVLRMLPRCGHAFHQRCVDRWLRLHQTCPVCR 138
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: A0A397TX84_9GLOM (RING-type domain-containing protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397TX84_9GLOM) HSP 1 Score: 58.2 bits (139), Expect = 1.780e-8 Identity = 23/44 (52.27%), Postives = 27/44 (61.36%), Query Frame = 3 Query: 51 EFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICR 182 E C +CL EY+ D L L C H FH +CI WFK +CPICR Sbjct: 68 ERCTICLSEYEHNDWLRDLPCAHDFHKECIDSWFKNSDKCPICR 111
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: A0A484DQN6_BRELC (RING-type domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQN6_BRELC) HSP 1 Score: 58.9 bits (141), Expect = 2.460e-8 Identity = 23/53 (43.40%), Postives = 30/53 (56.60%), Query Frame = 3 Query: 45 NAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICRFDRDEDN 203 N CPVC + GD + L C+H FH CI W K+H CP+CRF+ D+ Sbjct: 108 NCAECPVCKDSFAVGDDVHRLPCEHLFHPDCILPWLKQHNSCPLCRFELPTDD 160
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: A0A7S1GPE2_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GPE2_CYCTE) HSP 1 Score: 58.2 bits (139), Expect = 2.540e-8 Identity = 22/56 (39.29%), Postives = 33/56 (58.93%), Query Frame = 3 Query: 57 CPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPIC-------RFDRDEDN 203 C +C E + GD +G LSC H FH++C+K W +CP+C RF+ D++N Sbjct: 66 CTICFAEIEDGDRIGDLSCNHIFHVECLKTWLVRRNQCPLCAGDAATERFEDDDNN 121
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: A0A2I0ALN7_9ASPA (Putative E3 ubiquitin-protein ligase RHA2B n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0ALN7_9ASPA) HSP 1 Score: 59.7 bits (143), Expect = 2.680e-8 Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 3 Query: 42 TNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRCPICR 182 +N E CP+C + +GAL+C H +HLKCIK+W K CP+CR Sbjct: 176 SNQEICPICQDTEGANEEIGALNCGHLYHLKCIKKWLKIKNNCPLCR 222
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Match: A0A2C9WCP9_MANES (RING-type domain-containing protein n=1 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9WCP9_MANES) HSP 1 Score: 59.7 bits (143), Expect = 4.100e-8 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 3 Query: 36 CDTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWF-KEHQRCPICRFD 188 C+ N E C +CL +YK G++L L CQH FH C+ W K CP+C+FD Sbjct: 222 CNQNRETCAICLEDYKDGEILKVLPCQHEFHSSCVDSWLTKWGTFCPVCKFD 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig9.66.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig9.66.1 >prot_H-akashiwo_Contig9.66.1 ID=prot_H-akashiwo_Contig9.66.1|Name=mRNA_H-akashiwo_Contig9.66.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=63bp MPSSPTCDTNAEFCPVCLWEYKQGDMLGALSCQHCFHLKCIKRWFKEHQRback to top mRNA from alignment at H-akashiwo_Contig9:4736575..4736931+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig9.66.1 ID=mRNA_H-akashiwo_Contig9.66.1|Name=mRNA_H-akashiwo_Contig9.66.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=357bp|location=Sequence derived from alignment at H-akashiwo_Contig9:4736575..4736931+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig9:4736575..4736931+ >mRNA_H-akashiwo_Contig9.66.1 ID=mRNA_H-akashiwo_Contig9.66.1|Name=mRNA_H-akashiwo_Contig9.66.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=189bp|location=Sequence derived from alignment at H-akashiwo_Contig9:4736575..4736931+ (Heterosigma akashiwo CCMP452)back to top |