mRNA_H-akashiwo_Contig898.5.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig898.5.1
Unique NamemRNA_H-akashiwo_Contig898.5.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: A0A7S4DD78_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DD78_HETAK)

HSP 1 Score: 639 bits (1648), Expect = 6.410e-231
Identity = 311/327 (95.11%), Postives = 322/327 (98.47%), Query Frame = 1
Query:    1 LMSLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAYSDADFCNDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLAKEQVSLGTIRMFFIKTHDQVAGILTK 981
            L SLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISG+SQA+VSEFKQSLASKY+LTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTP+DHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRA+SD+DFCNDRVDGKSVTGYILFLGD+PIVWSSKLQGAVTTSTVEAEY+ALRSAVKDIMWLRSLL EMGCPQH+PTPVVEDNSACVEWAND+LVNKRNRH HVSYHLAKEQVSLGTIRMF+IKTHDQVA ILTK
Sbjct:    7 LESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAVVSEFKQSLASKYSLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPLDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAFSDSDFCNDRVDGKSVTGYILFLGDAPIVWSSKLQGAVTTSTVEAEYLALRSAVKDIMWLRSLLEEMGCPQHEPTPVVEDNSACVEWANDMLVNKRNRHFHVSYHLAKEQVSLGTIRMFYIKTHDQVADILTK 333          
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: A0A7S3Y6S2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6S2_HETAK)

HSP 1 Score: 352 bits (904), Expect = 5.050e-119
Identity = 173/176 (98.30%), Postives = 174/176 (98.86%), Query Frame = 1
Query:    1 LMSLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYL 528
            L SLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISG+SQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAF VHKLQRTQINPEPKHFEAVQRAFRYL
Sbjct:   93 LESLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGSSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFTVHKLQRTQINPEPKHFEAVQRAFRYL 268          
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 273 bits (697), Expect = 2.140e-80
Identity = 138/331 (41.69%), Postives = 209/331 (63.14%), Query Frame = 1
Query:    1 LMSLGFKRSGHESCLY--IHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELS--DANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAYSDADFCNDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLAKEQVSLGTIRMFFIKTHDQVAGILTK 981
            L+  G+ R+G++SC+Y  +   GG  L ++VYVDD+V++ + ++ +S  K++++  YN++D GE+  ILGIKV RD+  +   LSQ SFI++A  KF +        P++  +D+         LS  +A  +RS+VGT+ W+A WT PE+A+++H L +   +P      A     RYL  T+ + + LGG L L AY+DADFC++R  G+S +G+ +FLG SPI+WSS++Q  VT +T EAEY++LR+AV D+MWL+ LL  +G  Q    P+ EDN AC+ WAND  V+K  RH HVSYH  KE V    I + ++ T  Q+A + TK
Sbjct:  651 LLQQGYTRNGYDSCVYSKVSSTGGKTL-ISVYVDDIVLASSDKSELSRIKKAISLGYNVSDMGEIESILGIKVQRDRTARTITLSQHSFIEEACEKFQVRSYEPVTNPVNKGIDVNINTDTSRRLSTFEAKKFRSLVGTVNWLALWTFPEVAYSIHTLSKRFTSPSANCLAASYHLLRYLWWTEDKGVTLGGPLNLTAYADADFCSERHKGRSRSGFAIFLGFSPIIWSSRMQHCVTRNTTEAEYVSLRNAVTDVMWLKRLLESLGYKQ-GCVPIYEDNKACITWANDETVSKSARHIHVSYHYTKEMVQSKEIEVKYVDTKHQIADVFTK 979          
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: A0A146HFR8_MYCCL (Polyprotein (Fragment) n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146HFR8_MYCCL)

HSP 1 Score: 234 bits (596), Expect = 7.730e-71
Identity = 121/330 (36.67%), Postives = 193/330 (58.48%), Query Frame = 1
Query:    7 SLGFKRSGHESCLYIHRDGGNE--LMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANL---YRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAYSDADFCNDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLAKEQVSLGTIRMFFIKTHDQVAGILTK 981
            SLGF R   + C+Y+ RD   +   +VAV+VDD+ +   +   +++ K  L+SK+ +TD G L QILG+++ ++  +    LSQ ++    L   G++   A +TP+D  V LTP       + D      Y S +G L ++A  TRP+LAFAV  L +  I P P+H  A++R FRYL+GT S  +   G   L  +SDAD+ ND  D +S++GY+ FLG SP+ W+S+ Q  V  ST+EAEYMA      +I+WLR L +E+G     PTP+  DN + +++A + + + R++H  + +H  +E+V+   +++    + D +A ILTK
Sbjct:   32 SLGFTRLTADQCVYVRRDPKTDSPTIVAVHVDDMTLCARTDEELTQIKGELSSKFKVTDLGPLKQILGMEISQNPTDGSIRLSQANYASRVLESVGMEKANAVQTPLDPNVKLTPLAKGDPRIGDTAFRHGYLSGIGKLMYLAVATRPDLAFAVQHLSQFSIRPGPEHMSALKRVFRYLRGTTSLGIAFRGSGDLHIFSDADWGNDNTDRRSISGYLSFLGASPLSWASRKQPTVALSTMEAEYMAAARTTCEIIWLRQLASELGISVEAPTPIHIDNQSAIKFAENPMFHARSKHIDMRHHFVRERVASNEVKLVHCASEDNLADILTK 361          
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: UPI001E695AE6 (uncharacterized mitochondrial protein AtMg00810-like n=3 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E695AE6)

HSP 1 Score: 225 bits (574), Expect = 1.390e-67
Identity = 121/329 (36.78%), Postives = 196/329 (59.57%), Query Frame = 1
Query:    1 LMSLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRL--GGDLVLRAYSDADFCNDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLAKEQVSLGTIRMFFIKTHDQVAGILTK 981
            + SLGF+ S ++S L++       +++++YVDD++I+G+    + E K  LA K+ + D G L   LGI+V   ++   + LSQ+ +I + L +  L    A  +P++  V   P+ G    L+D  LYR++VG+L ++   TRP++A+AVH + +  ++P   H+ AV R  RYL+GTQ +SL       L L AYSDAD+  D +D KS TG+ +FLG+S I W SK Q  V+ S+ EAEY A+ S   +I+WLR LL++MG     PTP+  DN + ++ A++ + ++R +H  +  H  +  +  GTI + FI +  Q+A + TK
Sbjct:   39 ISSLGFRSSDYDSALFVRTTSHGRIILSLYVDDMIITGDDVDGIDEVKLQLAKKFEMKDLGPLRYFLGIEVAYSRKG--YLLSQSKYISNILEQARLSDNRAIDSPLELNVKYAPSDG--VPLADPTLYRTLVGSLVYLTI-TRPDIAYAVHVVSQFVVSPTTVHWAAVLRILRYLRGTQFQSLLFPSSSSLELCAYSDADWAGDPIDRKSTTGFCIFLGESLISWKSKKQDIVSRSSTEAEYRAMASTTTEIVWLRWLLSDMGISLSQPTPMYCDNKSAIQIAHNSVFHERTKHIEIDCHFTRHHLQHGTITLPFISSSLQIADLFTK 362          
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: UPI00098DD449 (uncharacterized protein LOC109818890 n=1 Tax=Cajanus cajan TaxID=3821 RepID=UPI00098DD449)

HSP 1 Score: 222 bits (566), Expect = 2.310e-66
Identity = 121/324 (37.35%), Postives = 187/324 (57.72%), Query Frame = 1
Query:   16 FKRSGHESCLYIHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAYSDADFCNDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLAKEQVSLGTIRMFFIKTHDQVAGILTK 981
            F +  +E  LYI   G + L+V +YVDDL+ +GN+ ++  EFK+ +  ++ +TD G +   LGI+V +   N+   ++Q S+ KD L KF LD      TP++  + L+     + E  D  LY+S+VG+L ++   TRP++ +AV  + R    P   H +  +R  RY+KGT S  L      D  L  YSD+D+  D  D KS +G++ ++GD+   W SK Q  VT ST EAEY+A  S V   +WLR+LL E+  PQ +PT +  DN + +  A + + + R++H H  YH  +E +S   ++M ++KTHDQVA I TK
Sbjct:   48 FIKCPYEHALYIKAQGKDILIVCLYVDDLIFTGNNPSMFEEFKKDMTKEFEMTDMGLMAYYLGIEVKQG--NEGIFITQESYAKDLLKKFKLDDANPVGTPMECGIKLSKDE--EGEKVDPTLYKSLVGSLRYLT-CTRPDILYAVGVVSRYMEAPTTTHLKTAKRILRYIKGTTSFGLYYSNSNDYKLVGYSDSDWSGDMDDRKSTSGFVFYMGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQVEPTKIYVDNKSAIALAKNPVFHDRSKHIHTRYHYIRECISNKDVQMEYVKTHDQVADIFTK 366          
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: UPI00092F348A (uncharacterized protein LOC109344732 n=3 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F348A)

HSP 1 Score: 221 bits (564), Expect = 1.600e-65
Identity = 120/329 (36.47%), Postives = 190/329 (57.75%), Query Frame = 1
Query:    1 LMSLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAYSDADFCNDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLAKEQVSLGTIRMFFIKTHDQVAGILTK 981
            + SLGF  S H+S L++       +++++YVDD++I+G+    + + K  LA ++ + D G LT  LGI+V    R   + LSQ+ +I D L    L    A  +P++     T + G    LS+  LYR++VG+L ++   TRP++A+AVH + +   +P   H+  V R  RYL+GT+ +SL       L L AYSDAD+  D  D KS TG+ +FLGDS I W SK Q  ++ S+ EAEY A+ +   +I+WLR LLA +G  Q +PTP+  DN + ++ A++ + ++R +H  +  H  +     GTI + FI +  Q+A + TK
Sbjct:   88 ITSLGFSSSPHDSALFVRNTPHGCIIISLYVDDMIITGDDIDGIIKLKTQLAEQFEMKDLGTLTYFLGIEVASSPRG--YLLSQSKYIADILDLVSLSDTKAVDSPLETNARYTSSDG--VPLSEPTLYRTLVGSLVYLTI-TRPDIAYAVHIVSQFVSSPNTVHWAVVLRILRYLRGTEFQSLLFSSTSSLTLSAYSDADWAGDPTDRKSTTGFCIFLGDSLISWKSKKQDVISRSSTEAEYRAMATTTAEIVWLRWLLASLGVDQPEPTPMYCDNKSAIQIAHNSVFHERTKHIEIDCHFTRHHFQHGTITLPFISSSLQIADLFTK 411          
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: UPI000C1D5F2C (uncharacterized protein LOC111391063 n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D5F2C)

HSP 1 Score: 217 bits (552), Expect = 2.690e-64
Identity = 118/327 (36.09%), Postives = 189/327 (57.80%), Query Frame = 1
Query:    7 SLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAYSDADFCNDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLAKEQVSLGTIRMFFIKTHDQVAGILTK 981
            SLGF  S H+S L+        +++ +YVDD++I+G+    ++  K  LA ++ + D G L+  LGI+V    R   + +SQ+ +  D + +  L    +  TP++     + + G    L+D  LYR++VG L ++   TRP++A+ VH + +    P   H+ AV R  RYL+GT  +SL       LVLRAYSDAD+ +D +D KS TG+ +FLGDS I W SK Q  V+ S+ EAEY A+ S   +I+WLR LLA+MG     PTP+  DN++ ++ +++ + ++R +H  +  HL +  +  GTI + F+ +  Q+A   TK
Sbjct:   41 SLGFTSSHHDSTLFFRCTSAGHIILLLYVDDMIITGDDIDGIASLKLELACRFEMKDSGTLSYFLGIEVASSPRG--YLISQSKYTMDVIERARLTNNKSADTPLESNARYSSSDG--VPLTDPTLYRTIVGCLVYLTI-TRPDIAYGVHIVSQFVSAPTTVHWAAVVRILRYLRGTCFQSLLFPSTSSLVLRAYSDADWASDPIDRKSTTGFCVFLGDSLISWKSKKQTVVSCSSTEAEYRAMGSTTTEIVWLRWLLADMGVSHSSPTPMYCDNTSAIQISHNSVFHERTKHIKIDCHLVRHHLQTGTISLSFVSSSLQLADFFTK 362          
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: A0A6A4P152_LUPAL (Putative RNA-directed DNA polymerase n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A4P152_LUPAL)

HSP 1 Score: 222 bits (565), Expect = 5.850e-64
Identity = 122/329 (37.08%), Postives = 191/329 (58.05%), Query Frame = 1
Query:    1 LMSLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGG--DLVLRAYSDADFCNDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLAKEQVSLGTIRMFFIKTHDQVAGILTK 981
            + SLGF  S H+S L++       +++++YVDD++I+G+    +++ K  LA ++ + D G LT  LGI+V    R   + LSQ+ +I D L    L       +P++     T + G    LS+  LYR++VG+L ++   TRP++A+AVH + +   +P   H+ AV R  RYL+GTQ +SL       L L AYSDAD C D  D KS TG+ +FLGDS I W SK Q  ++ S+ EAEY A+ +   +I+WLR LLA +G  Q +PTP+  DN + ++ A++ + ++R +H  +  H  +     GTI + FI +  Q+A + TK
Sbjct:  264 ITSLGFSSSPHDSALFVRNSHHGCIIISLYVDDMIITGDDIDGITKLKTQLAEQFEMKDLGTLTYFLGIEVASSPRG--YLLSQSKYIADILDLVSLSDTKDVDSPLETNARYTSSDG--VPLSEPTLYRTLVGSLVYLTI-TRPDIAYAVHIVSQFVSSPSTVHWAAVLRILRYLRGTQFQSLLFSSTSSLTLSAYSDAD-CGDPTDRKSTTGFCIFLGDSLISWKSKKQDVISRSSTEAEYRAMATTTAEIVWLRWLLASLGVDQPEPTPMYCDNKSAIQIAHNSVFHERTKHIEIDCHFTRHHFQHGTITLPFISSSLQIADLFTK 586          
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Match: UPI000CD81E6B (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD81E6B)

HSP 1 Score: 214 bits (546), Expect = 7.630e-64
Identity = 123/329 (37.39%), Postives = 189/329 (57.45%), Query Frame = 1
Query:    1 LMSLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSLASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLPACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAVHKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRL--GGDLVLRAYSDADFCNDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDIMWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLAKEQVSLGTIRMFFIKTHDQVAGILTK 981
            + SLGF+ S H+S L+I       +++++YVDD++I+G+    +   K+ LA ++ + D G L   LGI+V +  +   + LSQT +I D   +  L       TPI+     +PT G    LSD +LYR++VG+L ++    R ++A AVH + +    P   H+ AV R  RYL+GTQ  +L       L LRAYSDA++ +D  D KS TGY +FLGDS I W SK Q  V+ S+ E+EY A+  A  +I+WLR LLA+MG     PTP+  DN + +  A + + ++R +H  +  H  +  +  GTI + ++ +  Q+A ILTK
Sbjct:    2 ITSLGFQPSNHDSALFIQCTNARWIILSLYVDDMIITGDDHDGIESLKRDLAHRFAMKDLGLLRYFLGIEVAQSPKG--YLLSQTKYISDLFERARLTDNRTVDTPIESNAKYSPTDG--VPLSDPSLYRTIVGSLVYLTV-IRSDIAHAVHVVSQFVTAPTTVHWGAVLRILRYLRGTQFRTLVFPSSSSLELRAYSDANWDSDIYDRKSTTGYCVFLGDSLISWKSKKQDVVSRSSTESEYRAMAIATCEIVWLRWLLADMGVHISQPTPLYCDNESAIMIAKNSVFHERTKHIEIDCHFTRHHLQKGTISLPYVPSSLQIADILTK 325          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig898.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DD78_HETAK6.410e-23195.11Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S3Y6S2_HETAK5.050e-11998.30Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S3Y1P1_HETAK2.140e-8041.69Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A146HFR8_MYCCL7.730e-7136.67Polyprotein (Fragment) n=1 Tax=Mycena chlorophos T... [more]
UPI001E695AE61.390e-6736.78uncharacterized mitochondrial protein AtMg00810-li... [more]
UPI00098DD4492.310e-6637.35uncharacterized protein LOC109818890 n=1 Tax=Cajan... [more]
UPI00092F348A1.600e-6536.47uncharacterized protein LOC109344732 n=3 Tax=Lupin... [more]
UPI000C1D5F2C2.690e-6436.09uncharacterized protein LOC111391063 n=2 Tax=Olea ... [more]
A0A6A4P152_LUPAL5.850e-6437.08Putative RNA-directed DNA polymerase n=1 Tax=Lupin... [more]
UPI000CD81E6B7.630e-6437.39uncharacterized mitochondrial protein AtMg00810-li... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig898contigH-akashiwo_Contig898:214860..215840 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog67593.Physo127720
PFAMsDUF4219,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size981
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.02e-60
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QHJF@4776|Peronosporales
Descriptiongag-polypeptide of LTR copia-type
Cds size978
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388028.8004057-UTR-H-akashiwo_Contig898:214859..2148621681388028.8004057-UTR-H-akashiwo_Contig898:214859..214862Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig898 214860..214862 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388028.8142488-CDS-H-akashiwo_Contig898:214862..2158401681388028.8142488-CDS-H-akashiwo_Contig898:214862..215840Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig898 214863..215840 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig898.5.1prot_H-akashiwo_Contig898.5.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig898 214863..215840 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig898.5.1

>prot_H-akashiwo_Contig898.5.1 ID=prot_H-akashiwo_Contig898.5.1|Name=mRNA_H-akashiwo_Contig898.5.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=326bp
MSLGFKRSGHESCLYIHRDGGNELMVAVYVDDLVISGNSQAIVSEFKQSL
ASKYNLTDQGELTQILGIKVVRDKRNKCFHLSQTSFIKDALAKFGLDYLP
ACKTPIDHTVDLTPTPGFKAELSDANLYRSMVGTLAWVANWTRPELAFAV
HKLQRTQINPEPKHFEAVQRAFRYLKGTQSESLRLGGDLVLRAYSDADFC
NDRVDGKSVTGYILFLGDSPIVWSSKLQGAVTTSTVEAEYMALRSAVKDI
MWLRSLLAEMGCPQHDPTPVVEDNSACVEWANDLLVNKRNRHSHVSYHLA
KEQVSLGTIRMFFIKTHDQVAGILTK
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mRNA from alignment at H-akashiwo_Contig898:214860..215840+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig898.5.1 ID=mRNA_H-akashiwo_Contig898.5.1|Name=mRNA_H-akashiwo_Contig898.5.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=981bp|location=Sequence derived from alignment at H-akashiwo_Contig898:214860..215840+ (Heterosigma akashiwo CCMP452)
CTTATGTCACTGGGGTTCAAGCGTAGTGGCCATGAGTCTTGCCTTTATAT TCATCGTGATGGGGGCAATGAGCTGATGGTTGCGGTTTACGTCGATGATT TGGTGATCAGTGGCAACTCTCAAGCTATTGTCTCTGAGTTTAAGCAGTCT CTCGCATCCAAGTACAATCTCACTGATCAAGGGGAACTCACCCAAATCCT TGGCATCAAGGTTGTTCGCGATAAACGGAACAAGTGTTTTCATCTTTCCC AAACCTCTTTCATCAAAGACGCACTGGCCAAGTTCGGGCTCGATTATCTT CCTGCGTGCAAAACACCTATTGATCACACTGTGGATCTCACACCTACACC CGGGTTTAAAGCGGAGCTCTCCGATGCAAACTTATACAGGTCTATGGTTG GAACGCTGGCCTGGGTTGCGAACTGGACAAGACCGGAGCTTGCTTTTGCG GTCCACAAGCTTCAGCGTACTCAAATTAATCCGGAGCCCAAGCATTTTGA AGCGGTCCAGCGTGCTTTTCGATACCTCAAGGGCACTCAGTCTGAATCCC TGCGGCTGGGTGGTGATCTGGTGCTACGAGCTTATTCTGATGCGGATTTC TGTAATGACCGTGTTGATGGAAAGTCAGTTACCGGCTATATTCTCTTTTT GGGTGATTCGCCTATTGTCTGGTCTTCAAAGCTTCAGGGTGCTGTCACTA CCTCTACTGTGGAAGCTGAGTATATGGCTCTCCGTTCAGCGGTTAAGGAC ATCATGTGGCTTCGCTCTCTTCTTGCTGAAATGGGGTGTCCTCAGCATGA TCCCACTCCTGTTGTGGAAGACAACAGTGCCTGTGTTGAGTGGGCCAATG ACTTGTTGGTTAATAAAAGAAATAGACATTCCCATGTGTCTTATCATCTT GCTAAGGAGCAAGTAAGCCTTGGCACTATCAGAATGTTTTTCATTAAAAC TCATGATCAAGTGGCTGGTATTCTGACCAAG
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Coding sequence (CDS) from alignment at H-akashiwo_Contig898:214860..215840+

>mRNA_H-akashiwo_Contig898.5.1 ID=mRNA_H-akashiwo_Contig898.5.1|Name=mRNA_H-akashiwo_Contig898.5.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=978bp|location=Sequence derived from alignment at H-akashiwo_Contig898:214860..215840+ (Heterosigma akashiwo CCMP452)
ATGTCACTGGGGTTCAAGCGTAGTGGCCATGAGTCTTGCCTTTATATTCA
TCGTGATGGGGGCAATGAGCTGATGGTTGCGGTTTACGTCGATGATTTGG
TGATCAGTGGCAACTCTCAAGCTATTGTCTCTGAGTTTAAGCAGTCTCTC
GCATCCAAGTACAATCTCACTGATCAAGGGGAACTCACCCAAATCCTTGG
CATCAAGGTTGTTCGCGATAAACGGAACAAGTGTTTTCATCTTTCCCAAA
CCTCTTTCATCAAAGACGCACTGGCCAAGTTCGGGCTCGATTATCTTCCT
GCGTGCAAAACACCTATTGATCACACTGTGGATCTCACACCTACACCCGG
GTTTAAAGCGGAGCTCTCCGATGCAAACTTATACAGGTCTATGGTTGGAA
CGCTGGCCTGGGTTGCGAACTGGACAAGACCGGAGCTTGCTTTTGCGGTC
CACAAGCTTCAGCGTACTCAAATTAATCCGGAGCCCAAGCATTTTGAAGC
GGTCCAGCGTGCTTTTCGATACCTCAAGGGCACTCAGTCTGAATCCCTGC
GGCTGGGTGGTGATCTGGTGCTACGAGCTTATTCTGATGCGGATTTCTGT
AATGACCGTGTTGATGGAAAGTCAGTTACCGGCTATATTCTCTTTTTGGG
TGATTCGCCTATTGTCTGGTCTTCAAAGCTTCAGGGTGCTGTCACTACCT
CTACTGTGGAAGCTGAGTATATGGCTCTCCGTTCAGCGGTTAAGGACATC
ATGTGGCTTCGCTCTCTTCTTGCTGAAATGGGGTGTCCTCAGCATGATCC
CACTCCTGTTGTGGAAGACAACAGTGCCTGTGTTGAGTGGGCCAATGACT
TGTTGGTTAATAAAAGAAATAGACATTCCCATGTGTCTTATCATCTTGCT
AAGGAGCAAGTAAGCCTTGGCACTATCAGAATGTTTTTCATTAAAACTCA
TGATCAAGTGGCTGGTATTCTGACCAAG
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