mRNA_H-akashiwo_Contig87.10.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: A0A7S0K957_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K957_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.530e-24 Identity = 58/128 (45.31%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 152 EESCTACQFCNDTCSLADCTTCSDKRQ---------RLRSVRKDRT--DSYFTPCEVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQKLL-EKFRIGVLIQC 499 E +C AC FC DTC C C + R RK RT + +T C+V RH T S W+V +G +YD T +LSRHPGG SIL GG D SED+ YHSK A+ L KFRIGV++ C Sbjct: 71 EGTCDACPFCQDTCMDPSCAICKSELVTSHSKPFFVNTRRKRKLRTVPEQCYTMCQVRRHNTRESAWLVADGVIYDATPFLSRHPGGERSILKYSGGVKDCSEDLNYHSKNARNFLWPKFRIGVVVDC 198
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: A0A8J2SW01_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SW01_9STRA) HSP 1 Score: 108 bits (271), Expect = 5.360e-24 Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 155 ESCTACQFCNDTCSLADCTTCSDKRQRLRSVRKDRTDSYFTPCEVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQKLLEKFRIGVLIQCGQVVSSSDSGCSI 538 ++C AC +C+DTC+ DC C+ R R R + R + F+PCEV RH + SCW+V V+D T +L RHP G SI+ R GGAD +ED+ +HS +AQKL + +IG L CG + D+GC++ Sbjct: 194 DACDACPYCHDTCADPDCPRCAVWRLRPRKM--CRGCAVFSPCEVRRHASAESCWLVAGRDVFDVTSFLPRHPAGTRSIV-RKAGGADCTEDLGFHSAKAQKLWMQHKIGRLEPCG-AEKNPDNGCAV 317
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: A0A7S3K3K6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3K6_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 6.390e-22 Identity = 49/116 (42.24%), Postives = 67/116 (57.76%), Query Frame = 2 Query: 152 EESCTACQFCNDTCSLADCTTCSDKRQRLRSVRKDRTDSYFTPCEVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQKLLEKFRIGVLIQC 499 E+ C AC +C+D CS C CS K R + FT CE+ RH T SCW+V ++YD T ++ RHP G SI+ R GG D +ED+ +HS +AQKL + +IG L+ C Sbjct: 27 EQICDACPYCDDRCSNPCCIVCSTKPITKRQGNR------FTRCEIRRHSTAESCWLVAGSTIYDVTSFIPRHPAGTYSIV-RNAGGRDCTEDLAFHSGKAQKLWNQHKIGRLMLC 135
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: A0A7S3V462_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V462_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.110e-21 Identity = 52/175 (29.71%), Postives = 88/175 (50.29%), Query Frame = 2 Query: 44 MCQSFFAIPAGDDLAHPISPDLLSVD----ESGFPVVLTAEESCTACQFCNDTCSLADCTTCSDKRQR-------------------LRSVRKDRTDSYFTPCEVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQKLLEKFRIGVLIQC 499 MC+S D + ++P L + ++ P ++ + SC AC C D C+ C +C +K + R+V+ D ++ Y TPC++ARH T S W++ ++D T ++ HPGG SIL + GG D + D+++HS +A K+ ++ RIG+L C Sbjct: 18 MCES-----DNDTIDRNMAPQLQTASKHDSDTSIPDLVYIQSSCDACPNCPDVCASNSCLSCREKAKMDSSITERPSRNKTPSNPFLSRNVKNDESELYITPCQLARHNTKESAWLLCGYEIFDATMFIKGHPGGESSILRKAGGVVDCARDLKFHSPRAIKMWKQSRIGILRPC 187
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: A0A7S3LGK6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGK6_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.890e-20 Identity = 53/145 (36.55%), Postives = 72/145 (49.66%), Query Frame = 2 Query: 101 PDLLSVDESGFPVVLTAEESCTACQFCNDTCSLADCTTCSDKRQRLRSVR----KDRTDSYFTPCEVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQKLLEKFRIGVLIQCGQVVSSSD 523 PD S D S L C AC +C+DTC C C +K S + + FT C+V +H T S WIV +YD T Y+ RHPGG IL + GG D ++D Q+HSK ++ K+++GVL+ C S D Sbjct: 34 PDGASDDSS-----LVGSGPCEACPYCSDTCGDDSCKLCVNKTCLEISTPTCPPRSASLPVFTLCQVRKHCTEKSVWIVAGKDIYDVTAYIDRHPGGRECILRKAGGARDCTDDFQFHSKAGRRGWNKYKVGVLVPCPGHASHQD 173
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: W6KYX4_9TRYP (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Phytomonas sp. isolate Hart1 TaxID=134013 RepID=W6KYX4_9TRYP) HSP 1 Score: 91.3 bits (225), Expect = 1.180e-19 Identity = 43/73 (58.90%), Postives = 52/73 (71.23%), Query Frame = 2 Query: 272 FTPCEVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQKLLEKFRIGVL 490 F+ EVA H T S WIV+ GSVYD T YL HPGGI +IL RGGG D + D+ +HS +AQKLLE F+IGV+ Sbjct: 17 FSADEVACHCTRESLWIVMRGSVYDVTSYLGSHPGGIETILKRGGGAKDCAVDMSFHSSRAQKLLESFKIGVI 89
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: B8BQT3_THAPS (Cytochrome b5 heme-binding domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQT3_THAPS) HSP 1 Score: 87.0 bits (214), Expect = 1.060e-18 Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 2 Query: 272 FTPCEVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQKLLEKFRIGVLIQCGQ 505 +T C++ RH T S WI+V ++YD T YL HPGG +IL + GG D +ED+ +HSK+AQK K+++G L +C + Sbjct: 2 YTMCQLRRHNTADSAWILVGDTIYDATPYLRNHPGGTTTILKKSGGVVDCTEDLSFHSKRAQKEWRKYKVGTLRRCSR 79
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: W6KDY4_9TRYP (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Phytomonas sp. isolate EM1 TaxID=134006 RepID=W6KDY4_9TRYP) HSP 1 Score: 89.0 bits (219), Expect = 1.440e-18 Identity = 39/69 (56.52%), Postives = 51/69 (73.91%), Query Frame = 2 Query: 284 EVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQKLLEKFRIGVL 490 E+ARH T S WIVV+ SVYD T YL HPGGI S+L RGGG D S D+ +H+ +A+K+LE F+IG++ Sbjct: 22 EIARHCTRESLWIVVDNSVYDVTSYLGSHPGGIESLLKRGGGARDCSADMAFHTSRARKMLESFKIGIV 90
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: A0A6G0WP77_9STRA (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP77_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 6.590e-18 Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 2 Query: 281 CEVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQKLLEKFRIGVLIQCGQVVSSSDSGCSIC 541 CEV RH++L SCW+V NG VYD T + +HP G IL R GG D ++D+++HSK AQ+ ++ IG L+ CG + ++D G +C Sbjct: 119 CEVKRHKSLTSCWLVSNGIVYDVTNVIQQHPAGTKCIL-RKAGGQDCTQDLKFHSKDAQRCWKQCAIGKLLPCGDIDPAADDGPGLC 204
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Match: A0A7S1VLX7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VLX7_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.030e-17 Identity = 43/117 (36.75%), Postives = 59/117 (50.43%), Query Frame = 2 Query: 161 CTACQFCNDTCSLADCTTCSDKRQRLRSVRKDRTD------------------SYFTPCEVARHRTLGSCWIVVNGSVYDCTKYLSRHPGGIPSILSRGGGGADASEDIQYHSKQAQ 457 C AC C D C+ DC +C R D T SY+TPC++ RH T+ S W++V ++YD T YL RHPGG SIL R GG D +D+ +HS++ + Sbjct: 69 CDACPHCGDRCARVDCLSC---RPASPESETDDTSVEEVGKCGFPWGDDSSQLSYYTPCQLRRHNTMESAWLLVGDTIYDATTYLRRHPGGSTSILRRAGGAVDCGQDLAFHSRKGR 182 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig87.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig87.10.1 >prot_H-akashiwo_Contig87.10.1 ID=prot_H-akashiwo_Contig87.10.1|Name=mRNA_H-akashiwo_Contig87.10.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=167bp MCQSFFAIPAGDDLAHPISPDLLSVDESGFPVVLTAEESCTACQFCNDTCback to top mRNA from alignment at H-akashiwo_Contig87:552101..552815+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig87.10.1 ID=mRNA_H-akashiwo_Contig87.10.1|Name=mRNA_H-akashiwo_Contig87.10.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=715bp|location=Sequence derived from alignment at H-akashiwo_Contig87:552101..552815+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig87:552101..552815+ >mRNA_H-akashiwo_Contig87.10.1 ID=mRNA_H-akashiwo_Contig87.10.1|Name=mRNA_H-akashiwo_Contig87.10.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=501bp|location=Sequence derived from alignment at H-akashiwo_Contig87:552101..552815+ (Heterosigma akashiwo CCMP452)back to top |