mRNA_H-akashiwo_Contig868.1.1 (mRNA) Heterosigma akashiwo CCMP452
Overview
Homology
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A7S4DEE9_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEE9_HETAK) HSP 1 Score: 486 bits (1252), Expect = 1.110e-167 Identity = 248/255 (97.25%), Postives = 249/255 (97.65%), Query Frame = 1 Query: 1 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKAGKFCAQTWCADDASAGGKMGQVR 765 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLK FC QTW ADDASAGGK+G VR Sbjct: 284 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKERGFCTQTWYADDASAGGKVGPVR 538
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A7S3Y8R3_HETAK (Hypothetical protein (Fragment) n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y8R3_HETAK) HSP 1 Score: 486 bits (1252), Expect = 1.520e-165 Identity = 248/255 (97.25%), Postives = 249/255 (97.65%), Query Frame = 1 Query: 1 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKAGKFCAQTWCADDASAGGKMGQVR 765 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLK FC QTW ADDASAGGK+G VR Sbjct: 284 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKERGFCTQTWYADDASAGGKVGPVR 538
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A7S3Y2Y7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2Y7_HETAK) HSP 1 Score: 306 bits (784), Expect = 2.590e-103 Identity = 154/178 (86.52%), Postives = 162/178 (91.01%), Query Frame = 1 Query: 133 YGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLS--REGTTQGDPLAMLMYA 660 +G AS RL EAVA LATKMSNEV+EWSD+SALL RRG+MLDKKPGLRPIG+GEVLQRILAK VAWVTKGDVT+ G DNLAGGLKSGIEGGVHAM+ELWAD EV+VLVDASNAFNSLDRQAALWNCRILWSRAS FLFNTYRGYARIFVKGVAQPVLS EGTTQGDPLAMLMYA Sbjct: 1 HGKASERLEEAVADLATKMSNEVMEWSDISALLARRGLMLDKKPGLRPIGVGEVLQRILAKLVAWVTKGDVTQESGADNLAGGLKSGIEGGVHAMKELWADGGPEVIVLVDASNAFNSLDRQAALWNCRILWSRASLFLFNTYRGYARIFVKGVAQPVLSISNEGTTQGDPLAMLMYA 178
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A0A9XG89_LYGHE (Mediator of RNA polymerase II transcription subunit 13 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XG89_LYGHE) HSP 1 Score: 280 bits (715), Expect = 2.160e-91 Identity = 138/252 (54.76%), Postives = 187/252 (74.21%), Query Frame = 1 Query: 10 LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKAGKFCAQTWCADDASAGGKMGQVR 765 LP+ ++ +T+ IE++A ++GSAG SGTD+ WK++LL YG S +LREAVASL +++N V+EWS + ALL RRG+ LDK PG+RPIG+GE+LQRI AK +A +T D+ EVCG+D L+ G+KSGIEG VHA+ ++ + + E ++LVDA+NAFN++ R ALWN RI W R + FLFNTYRGY + +LS+EGTTQGDPL M+MYAVG LPL++KLK G+ C Q W ADDAS GK+ ++R Sbjct: 22 LPLMVDIDVTSNHIEKIARRLRGSAGPSGTDAEQWKNMLLRYGAHSAQLREAVASLVRRLANGVIEWSRIKALLARRGVALDKCPGVRPIGVGELLQRICAKTMALITGEDLKEVCGSDQLSAGIKSGIEGAVHAISNMFNEAEHEGLLLVDATNAFNTMSRPLALWNSRIYWPRCARFLFNTYRGYPVTLFRKSDATLLSQEGTTQGDPLGMMMYAVGTLPLIQKLKNGQ-CKQNWYADDASCVGKLREIR 272
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A6H5GA13_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GA13_9HEMI) HSP 1 Score: 272 bits (696), Expect = 4.190e-86 Identity = 134/253 (52.96%), Postives = 183/253 (72.33%), Query Frame = 1 Query: 7 PLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKAGKFCAQTWCADDASAGGKMGQVR 765 PLP+ +V +TA +IE+VA +++GSAG SGT++ W+++LL +G S +LREA+ASL +M+N ++W+ + ALL RR + LDK PG+RPIG+ EVLQRI AKA+AW T D+ E CG+D L+ GLKSGIEG +HAM ++ +D TE ++LVDA NAFN L R ALWN RI W R + FLFN+YRGY I + +LSREGTTQGDPL +MYAVG L L+++LK+ + Q W ADD+S G + +V+ Sbjct: 99 PLPLMVDVDVTANLIEKVARSMRGSAGPSGTNASQWQNMLLRFGAHSNQLREAIASLIRRMANNNVDWNRIKALLARRAVALDKCPGVRPIGVSEVLQRICAKAMAWTTGDDLKEACGSDQLSAGLKSGIEGAIHAMSAIFEEDQTECILLVDARNAFNQLSRPLALWNARIFWPRCARFLFNSYRGYPLILFRQNNAFLLSREGTTQGDPLGAMMYAVGTLQLIKELKSPNW-KQMWYADDSSCAGSIARVQ 350
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A0K8TJU1_LYGHE (Uncharacterized protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0K8TJU1_LYGHE) HSP 1 Score: 273 bits (697), Expect = 2.030e-85 Identity = 131/252 (51.98%), Postives = 180/252 (71.43%), Query Frame = 1 Query: 10 LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKAGKFCAQTWCADDASAGGKMGQVR 765 +P E++ ++A+ I +VAH ++GSAG SGTDS W+ +LL +G+ S +LREA+ASL +SN ++EW + ALL RRG+ LDK PG+RPIG+GEVL RI AK + +T D+ E CG D L G K+G+E +H M + +++TE ++L+DA+NAFNSL R ALWN R+LW R + FLFN+YRGY I + ++ +LSREGTTQGDPL MLMYAVG LPL+R+LK F Q W ADD+S GK+ ++ Sbjct: 216 MPTLEDIDVSADHIAKVAHYLRGSAGPSGTDSDAWRDMLLRFGSHSHQLREAIASLVRSLSNGIMEWDKIVALLARRGVALDKNPGVRPIGVGEVLHRICAKTMVLITGVDLKEQCGADQLCAGAKAGVESAIHGMTRKYEENETEGMLLIDATNAFNSLSRPLALWNSRVLWPRCARFLFNSYRGYPTIVFRQNSETILSREGTTQGDPLGMLMYAVGTLPLIRRLKTEGFL-QNWYADDSSCIGKLSDLK 466
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A6H5HCT1_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5HCT1_9HEMI) HSP 1 Score: 282 bits (721), Expect = 9.600e-85 Identity = 138/255 (54.12%), Postives = 189/255 (74.12%), Query Frame = 1 Query: 1 DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKAGKFCAQTWCADDASAGGKMGQVR 765 ++PLP V IT+ IE VA ++GSAG SGTD+ W+++LL YG+ S +LREAVASLA +M+N +++W+ + A+L RRG+ LDK PG+RPIG+GE+LQRILAK +A +T D+ E CG+D LA G KSGIEG +HAM E++A++D E ++LVDA+NAFN++ R A+WN RILW R + FLFNTYRG+ + + + S+EGTTQGDPL MLMY+VG LPL++ LK ++ Q W ADD+S GK+ VR Sbjct: 309 NEPLPHMPNVDITSNHIESVARRIRGSAGPSGTDAEQWRNMLLRYGSHSQQLREAVASLARRMANGIVDWNQIRAILARRGVALDKCPGVRPIGVGEMLQRILAKTMALLTAEDLKEACGSDQLAAGTKSGIEGAIHAMEEIFAEEDQECLLLVDAANAFNTMSRPLAIWNARILWPRCAKFLFNTYRGFPVVLFRQSEITLHSQEGTTQGDPLGMLMYSVGTLPLIKSLKTNRW-VQNWYADDSSCCGKLRDVR 562
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A6H5GR62_9HEMI (Uncharacterized protein n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GR62_9HEMI) HSP 1 Score: 278 bits (711), Expect = 1.410e-84 Identity = 141/249 (56.63%), Postives = 183/249 (73.49%), Query Frame = 1 Query: 10 LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWA-DDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKAGKFCAQTWCADDASAGGKM 753 LP++ +V I+A IER AH + GSAG SGTD+ WK+LLL YGN S RLREAVASLA ++N V++WS + ALL RRG+ LDK+PG+RPIG+GEVL RI AK +A +T D+ E G D L GG K+G+EG VH + +L+ DDD E ++L+DA+NAFN+L R ALWN R+LW R S FLFNTYRG+ +G + +LS+EGTTQGDPL M MYA+G LPLVR+LK ++ Q W ADD++ GK+ Sbjct: 98 LPLQVDVNISANHIERSAHRLGGSAGPSGTDAEQWKNLLLRYGNHSVRLREAVASLARLLANGVVDWSRIKALLARRGVALDKQPGVRPIGVGEVLHRICAKTMATLTGDDLREAAGADQLCGGAKAGVEGAVHGIAKLYEEDDDCEGILLMDAANAFNALSRPLALWNARVLWPRCSRFLFNTYRGFPMTVFRGSSATILSQEGTTQGDPLGMYMYAIGTLPLVRQLKGSQW-RQNWYADDSACAGKL 345
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A0A9XM84_LYGHE (Uncharacterized protein n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9XM84_LYGHE) HSP 1 Score: 274 bits (700), Expect = 6.320e-84 Identity = 138/252 (54.76%), Postives = 178/252 (70.63%), Query Frame = 1 Query: 10 LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKAGKFCAQTWCADDASAGGKMGQVR 765 LP EV IT IE+ AH ++GSAG SGTD+ W+ +LL YG S RLREAVA+L +++N V+EWS + ALL RR + LDK+PG+RPIG+GEVLQRI AK +A VT GD+ E C + L G KSG+EG VH M L+ D + E ++L+DASNAFNSL R ALWN RILW R S FLFNTYRG+ + + ++S+EGTTQGDPL M MYAVG LPL+R+L+ ++ Q W ADD++ G++ VR Sbjct: 293 LPTLLEVDITDNHIEKAAHRLRGSAGPSGTDARQWRDMLLRYGAHSRRLREAVAALTRRLANGVVEWSTIRALLARRAVALDKQPGIRPIGVGEVLQRICAKTMAMVTGGDLQEECAAEQLCAGTKSGVEGAVHGMTRLFEDPNCESILLMDASNAFNSLSRPLALWNARILWPRCSTFLFNTYRGFPMLVFRNSDAEIISQEGTTQGDPLGMYMYAVGTLPLIRQLRGDEW-RQVWYADDSACAGRLIAVR 543
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Match: A0A146L2U3_LYGHE (Uncharacterized protein (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L2U3_LYGHE) HSP 1 Score: 276 bits (705), Expect = 8.160e-84 Identity = 132/252 (52.38%), Postives = 180/252 (71.43%), Query Frame = 1 Query: 10 LPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGRLREAVASLATKMSNEVLEWSDLSALLVRRGIMLDKKPGLRPIGIGEVLQRILAKAVAWVTKGDVTEVCGTDNLAGGLKSGIEGGVHAMRELWADDDTEVVVLVDASNAFNSLDRQAALWNCRILWSRASYFLFNTYRGYARIFVKGVAQPVLSREGTTQGDPLAMLMYAVGVLPLVRKLKAGKFCAQTWCADDASAGGKMGQVR 765 LP +++ ++ + I +VAH++KGSAG SGTDS W+ +LL +G S RLR+A+A+L +MSN ++EW + ALL RRG+ LDK PG+RPIG+GEVLQRI AK + +VT D+ E CG D L G K+G+E +H M +AD +TE ++L+DA+NAFNSL R LWN R+LW R + FLFNTYRG+ + + +LSREGTTQGDPL MLMY VG LPL+RKLK+ + QTW ADD++ GK+ ++ Sbjct: 254 LPTMKDIDVSGDHIAKVAHSLKGSAGPSGTDSETWRDMLLRFGAHSSRLRDAIAALVRRMSNGIMEWDKIKALLARRGVALDKNPGVRPIGVGEVLQRICAKTMVFVTGIDLKEECGADQLCAGTKAGVESAIHGMSMRFADTETEGMLLIDATNAFNSLSRPLTLWNARMLWPRCARFLFNTYRGFPTTVFRQSDELILSREGTTQGDPLGMLMYGVGTLPLIRKLKSANY-QQTWYADDSTCVGKLSDLK 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig868.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig868.1.1 >prot_H-akashiwo_Contig868.1.1 ID=prot_H-akashiwo_Contig868.1.1|Name=mRNA_H-akashiwo_Contig868.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=255bp DQPLPVKEEVVITAEVIERVAHAVKGSAGVSGTDSVVWKSLLLGYGNASGback to top mRNA from alignment at H-akashiwo_Contig868:29071..29835- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig868.1.1 ID=mRNA_H-akashiwo_Contig868.1.1|Name=mRNA_H-akashiwo_Contig868.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=765bp|location=Sequence derived from alignment at H-akashiwo_Contig868:29071..29835- (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig868:29071..29835- >mRNA_H-akashiwo_Contig868.1.1 ID=mRNA_H-akashiwo_Contig868.1.1|Name=mRNA_H-akashiwo_Contig868.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=765bp|location=Sequence derived from alignment at H-akashiwo_Contig868:29071..29835- (Heterosigma akashiwo CCMP452)back to top |