mRNA_H-akashiwo_Contig861.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig861.1.1
Unique NamemRNA_H-akashiwo_Contig861.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: A0A7S3XP27_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP27_HETAK)

HSP 1 Score: 568 bits (1463), Expect = 1.790e-203
Identity = 290/309 (93.85%), Postives = 294/309 (95.15%), Query Frame = 1
Query:    1 SQDNLLGSRLYKRNCHTHPCLAHTPSSTQLQSQSSLSAMASLTNSLVKAARPLLGQSAARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISGHDRAP 918
            SQDNLLGSRLYKRNCHTHPCLAHTPSSTQLQSQSSLSAMASLTNSLVKAARPLLGQSAARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG  G +A+     WLMEHGD  + VAAFI+G    P
Sbjct:    9 SQDNLLGSRLYKRNCHTHPCLAHTPSSTQLQSQSSLSAMASLTNSLVKAARPLLGQSAARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIGEIGGSAEEEAAEWLMEHGDPNKPVAAFIAGTTAPP 317          
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: A0A7S2LEI1_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LEI1_9STRA)

HSP 1 Score: 392 bits (1006), Expect = 6.420e-134
Identity = 194/250 (77.60%), Postives = 211/250 (84.40%), Query Frame = 1
Query:  178 RCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISGHDRAP 918
            R MSANAKVWIDKDTRVICQGFTGKQGTFHS  AI YGT+MVGGVTPKKGG EHLGLPVFNTV EA   V+PDAS+I+VPPPFCA AI+DAI+AEIPLVVAITEG+PQ DM +VK+ L+ Q KTRLIGPNCPGIIKPGE K+GIMPGYIH  G+IGVVSRSGTLTYEAVHQT+  GLGQSTCVGIGGDPFNGTNFIDCLERFT+DPQTEGIIMIG  G  A+     WL EHGD  + V  FI+G    P
Sbjct:   22 RSMSANAKVWIDKDTRVICQGFTGKQGTFHSEQAIAYGTQMVGGVTPKKGGQEHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAKAIMDAIEAEIPLVVAITEGVPQQDMARVKHMLKAQDKTRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVHQTTTAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPQTEGIIMIGEIGGTAEEEAAEWLKEHGDPNKPVVGFIAGMTAPP 271          
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: A0A1E7FEJ7_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FEJ7_9STRA)

HSP 1 Score: 391 bits (1004), Expect = 1.120e-133
Identity = 195/253 (77.08%), Postives = 215/253 (84.98%), Query Frame = 1
Query:  169 SAARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISGHDRAP 918
            SA+R MS+ AKVW+DK+TRVICQGFTGKQGTFHST AIEYGT MVGGVTP KGG EHLGLPVFNTV EA   +KPDAS+I+VPPPFCAAAI+DAI+AEIPLVVAITEG+PQ DM +VKY LRQQS TRLIGPNCPGIIKPGE K+GIMPGYIH KG+IGVVSRSGTLTYEAVHQT+  GLGQST VGIGGDPFNGTNFIDCLERFT+DP+TEGIIMIG  G  A+     WL E+GD  + V  FI+G    P
Sbjct:   19 SASRSMSSTAKVWVDKNTRVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPNKGGQEHLGLPVFNTVAEAVDELKPDASVIYVPPPFCAAAIMDAIEAEIPLVVAITEGVPQQDMARVKYALRQQSATRLIGPNCPGIIKPGECKIGIMPGYIHTKGKIGVVSRSGTLTYEAVHQTTIAGLGQSTVVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGNAEEEAAEWLKEYGDPNKPVVGFIAGTTAPP 271          
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: A0A7S4UK23_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UK23_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 2.110e-133
Identity = 194/264 (73.48%), Postives = 217/264 (82.20%), Query Frame = 1
Query:  136 LVKAARPLLGQSAARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISGHDRAP 918
            LV +A+      + RCMSANAKVW+DKDT+VICQGFTGKQGTFHST AIEYGT MVGGVTPKKGG  HLGLPVFNTV EA   V+PDAS+I+VPPPFCA AI+DAI+ EI LVVAITEG+PQ DM +VK  L+ Q+KTRLIGPNCPGIIKPGE K+GIMPGYIH  G+IGVVSRSGTLTYEAVHQT+  GLGQSTCVGIGGDPFNGTNFIDCLERFT+DPQTEGIIMIG  G +A+     WL E+GD  + V  FI+G    P
Sbjct:   11 LVASAQRAASNGSRRCMSANAKVWVDKDTKVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAGAIMDAIENEISLVVAITEGVPQQDMARVKAALKTQNKTRLIGPNCPGIIKPGECKIGIMPGYIHMPGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPQTEGIIMIGEIGGSAEEEAAEWLKEYGDPNKPVVGFIAGMTAPP 274          
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: A0A6U3SMJ6_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SMJ6_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 2.600e-133
Identity = 194/264 (73.48%), Postives = 217/264 (82.20%), Query Frame = 1
Query:  136 LVKAARPLLGQSAARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISGHDRAP 918
            LV +A+      + RCMSANAKVW+DKDT+VICQGFTGKQGTFHST AIEYGT MVGGVTPKKGG  HLGLPVFNTV EA   V+PDAS+I+VPPPFCA AI+DAI+ EI LVVAITEG+PQ DM +VK  L+ Q+KTRLIGPNCPGIIKPGE K+GIMPGYIH  G+IGVVSRSGTLTYEAVHQT+  GLGQSTCVGIGGDPFNGTNFIDCLERFT+DPQTEGIIMIG  G +A+     WL E+GD  + V  FI+G    P
Sbjct:   11 LVASAQRAASNGSRRCMSANAKVWVDKDTKVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVEGVQPDASVIYVPPPFCAGAIMDAIENEISLVVAITEGVPQQDMARVKAALKTQNKTRLIGPNCPGIIKPGECKIGIMPGYIHMPGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPQTEGIIMIGEIGGSAEEEAAEWLKEYGDPNKPVVGFIAGMTAPP 274          
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: A0A7R9ZLR7_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLR7_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 2.790e-133
Identity = 197/269 (73.23%), Postives = 221/269 (82.16%), Query Frame = 1
Query:  130 NSLVKAARPLLGQSAA---RCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISGHDRAP 918
            N+  K    L+G+ AA   R MS+ AKVWIDKDTRVICQGFTGKQGTFHS  AIEYGT MVGGVTPKKGG  HLGLPVFNTVEEA   VKPDAS+I+VPPPFCA AI+DAI+AEIPLVVAITEG+PQ +M +VK+ L  Q+ TRLIGPNCPGIIKPGE K+GIMPGYIHQKG+IGVVSRSGTLTYEAVHQT+  GLGQSTCVGIGGDPFNGTNFIDCLERFT+DP+TEGIIMIG  G +A+     W+ E+GD  + V  FI+G    P
Sbjct:    2 NTTGKIVSSLVGRQAAAGRRSMSSTAKVWIDKDTRVICQGFTGKQGTFHSEQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVEEAKTEVKPDASVIYVPPPFCAQAIMDAIEAEIPLVVAITEGVPQQEMARVKHALNTQTATRLIGPNCPGIIKPGECKIGIMPGYIHQKGKIGVVSRSGTLTYEAVHQTTVAGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWIKEYGDPNKPVVGFIAGMTAPP 270          
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: H3G957_PHYRM (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=26 Tax=Peronosporaceae TaxID=4777 RepID=H3G957_PHYRM)

HSP 1 Score: 390 bits (1001), Expect = 2.890e-133
Identity = 193/252 (76.59%), Postives = 217/252 (86.11%), Query Frame = 1
Query:  172 AARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISGHDRAP 918
            A R MSA+AKVWI+KDT+VICQGFTGKQGTFHS  AIEYGTKMVGGVTPKKGG+ HLGLPVFNTV EA      DAS+I+VPPPFCAA+II+AI+AEIPLVVAITEGIPQ DMVKVK+HLR QS TRLIGPNCPGIIKPGE KMGIMPGYIHQKG++G+VSRSGTLTYEAV QT+A+GLGQST +GIGGDPFNGTNFIDCLERFT+DP+TEGIIM+G  G +A+     WLM HGD  + V +FI+G    P
Sbjct:   16 ATRSMSASAKVWINKDTKVICQGFTGKQGTFHSQQAIEYGTKMVGGVTPKKGGSTHLGLPVFNTVAEAKKETGADASVIYVPPPFCAASIIEAIEAEIPLVVAITEGIPQQDMVKVKWHLRNQSTTRLIGPNCPGIIKPGECKMGIMPGYIHQKGKVGIVSRSGTLTYEAVAQTTALGLGQSTVIGIGGDPFNGTNFIDCLERFTNDPETEGIIMVGEIGGSAEEEAAEWLMAHGDPNKPVVSFIAGTTAPP 267          
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: F0YDA5_AURAN (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDA5_AURAN)

HSP 1 Score: 386 bits (992), Expect = 5.110e-132
Identity = 190/251 (75.70%), Postives = 214/251 (85.26%), Query Frame = 1
Query:  175 ARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISGHDRAP 918
            AR  SA+AKVWI+K+T+VICQGFTGKQGTFHS  A+ YGT +VGGVTPKKGG EHLGLPVF+TV +A  AV PDASMI+VPPPFC AAI+DAI+AEIPLVVAITEG+PQ DMV+VKYHL +QS TRLIGPNCPGIIKPGE K+GIMPGYIH+KG+IGVVSRSGTLTYEAVHQT+  GLGQSTCVGIGGDPFNGTNFIDCLERFT+DP+TEGIIMIG  G +A+     WL  HGD  + V  FI+G    P
Sbjct:    2 ARSFSASAKVWINKETKVICQGFTGKQGTFHSEQALAYGTNVVGGVTPKKGGQEHLGLPVFDTVMDAKKAVNPDASMIYVPPPFCKAAIMDAIEAEIPLVVAITEGVPQQDMVEVKYHLTRQSATRLIGPNCPGIIKPGECKIGIMPGYIHKKGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCVGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKAHGDPDKPVVGFIAGTTAPP 252          
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: A0A2D4BH57_PYTIN (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BH57_PYTIN)

HSP 1 Score: 387 bits (993), Expect = 5.270e-132
Identity = 194/247 (78.54%), Postives = 215/247 (87.04%), Query Frame = 1
Query:  172 AARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISG 903
            A R MSA+AKVWI+K+T+VICQGFTGKQGTFHS  AI YGTKMVGGVTPKKGGT HLGLPVF+TV+EA  A   DAS+I+VPPPFCA AIIDAI+AEIPLVVAITEGIPQ DMVKVK+HLRQQS TRLIGPNCPGIIKPGE KMGIMPG+IHQKGRIG+VSRSGTLTYEAV QT+A GLGQST +GIGGDPFNGTNFIDCLERFT+DP+TEGIIMIG  G +A+     WL  HGD  + V +FI+G
Sbjct:   17 ATRNMSASAKVWINKETKVICQGFTGKQGTFHSEQAIAYGTKMVGGVTPKKGGTTHLGLPVFDTVKEAKEATGADASVIYVPPPFCAQAIIDAIEAEIPLVVAITEGIPQKDMVKVKWHLRQQSVTRLIGPNCPGIIKPGECKMGIMPGHIHQKGRIGIVSRSGTLTYEAVAQTTAAGLGQSTVIGIGGDPFNGTNFIDCLERFTNDPETEGIIMIGEIGGSAEEEAAEWLKAHGDPNKPVVSFIAG 263          
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Match: A0A7S0AIP9_9STRA (Succinate--CoA ligase [ADP-forming] subunit alpha, mitochondrial n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A7S0AIP9_9STRA)

HSP 1 Score: 385 bits (988), Expect = 5.460e-131
Identity = 190/250 (76.00%), Postives = 210/250 (84.00%), Query Frame = 1
Query:  178 RCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDAIKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAKMGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFNGTNFIDCLERFTHDPQTEGIIMIG--GSAAQRXXRRWLMEHGD-QQAVAAFISGHDRAP 918
            RCMS+ A VW+DK+T+VICQGFTGKQGTFHST AIEYGT MVGGVTPKKGG  HLGLPVFNTV EA   V+PDAS+I+VPPPFCAAAI+DAI+ EIPLVVAITEG+PQ DM KVK  L  QS TRLIGPNCPGIIKPGE K+GIMPGYIH  G+IGVVSRSGTLTYEAVHQT+  GLGQSTCVGIGGDPFNGT+FIDCLERFT+DPQTEGIIMIG  G +A+     WL EHGD  + V +FI+G    P
Sbjct:   36 RCMSSTANVWVDKNTKVICQGFTGKQGTFHSTQAIEYGTNMVGGVTPKKGGQTHLGLPVFNTVAEAVDGVQPDASVIYVPPPFCAAAIMDAIENEIPLVVAITEGVPQQDMAKVKKALSMQSATRLIGPNCPGIIKPGECKIGIMPGYIHTPGKIGVVSRSGTLTYEAVHQTTVTGLGQSTCVGIGGDPFNGTDFIDCLERFTNDPQTEGIIMIGEIGGSAEEDAAEWLKEHGDPNKPVVSFIAGMTAPP 285          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig861.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3XP27_HETAK1.790e-20393.85Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2LEI1_9STRA6.420e-13477.60Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A1E7FEJ7_9STRA1.120e-13377.08Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S4UK23_9STRA2.110e-13373.48Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A6U3SMJ6_9STRA2.600e-13373.48Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7R9ZLR7_9STRA2.790e-13373.23Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
H3G957_PHYRM2.890e-13376.59Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
F0YDA5_AURAN5.110e-13275.70Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A2D4BH57_PYTIN5.270e-13278.54Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]
A0A7S0AIP9_9STRA5.460e-13176.00Succinate--CoA ligase [ADP-forming] subunit alpha,... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig861contigH-akashiwo_Contig861:35256..37166 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog67593.Physo143975
PFAMsCoA_binding,Ligase_CoA
Model size934
Max annot lvl4776|Peronosporales
KEGG rclassRC00004,RC00014
KEGG koko:K01899
KEGG ReactionR00432,R00727
KEGG Pathwayko00020,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011
Hectar predicted targeting categoryother localisation
Exons6
Evalue3.12e-134
EggNOG OGsCOG0074@1|root,KOG1255@2759|Eukaryota,3QA75@4776|Peronosporales
EC6.2.1.4,6.2.1.5
DescriptionSuccinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
Cds size933
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig861.1.1prot_H-akashiwo_Contig861.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig861 35257..37166 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388015.7010183-CDS-H-akashiwo_Contig861:35256..353841681388015.7010183-CDS-H-akashiwo_Contig861:35256..35384Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig861 35257..35384 -
1681388015.7149773-CDS-H-akashiwo_Contig861:35693..358551681388015.7149773-CDS-H-akashiwo_Contig861:35693..35855Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig861 35694..35855 -
1681388015.7247798-CDS-H-akashiwo_Contig861:36018..361451681388015.7247798-CDS-H-akashiwo_Contig861:36018..36145Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig861 36019..36145 -
1681388015.7338123-CDS-H-akashiwo_Contig861:36350..365031681388015.7338123-CDS-H-akashiwo_Contig861:36350..36503Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig861 36351..36503 -
1681388015.7430785-CDS-H-akashiwo_Contig861:36701..368091681388015.7430785-CDS-H-akashiwo_Contig861:36701..36809Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig861 36702..36809 -
1681388015.7535083-CDS-H-akashiwo_Contig861:36911..371661681388015.7535083-CDS-H-akashiwo_Contig861:36911..37166Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig861 36912..37166 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig861.1.1

>prot_H-akashiwo_Contig861.1.1 ID=prot_H-akashiwo_Contig861.1.1|Name=mRNA_H-akashiwo_Contig861.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=311bp
SQDNLLGSRLYKRNCHTHPCLAHTPSSTQLQSQSSLSAMASLTNSLVKAA
RPLLGQSAARCMSANAKVWIDKDTRVICQGFTGKQGTFHSTNAIEYGTKM
VGGVTPKKGGTEHLGLPVFNTVEEAAAAVKPDASMIFVPPPFCAAAIIDA
IKAEIPLVVAITEGIPQSDMVKVKYHLRQQSKTRLIGPNCPGIIKPGEAK
MGIMPGYIHQKGRIGVVSRSGTLTYEAVHQTSAVGLGQSTCVGIGGDPFN
GTNFIDCLERFTHDPQTEGIIMIGGSAAQRRRRRWLMEHGDQQAVAAFIS
GHDRAPRPPNG
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mRNA from alignment at H-akashiwo_Contig861:35256..37166-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig861.1.1 ID=mRNA_H-akashiwo_Contig861.1.1|Name=mRNA_H-akashiwo_Contig861.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=1911bp|location=Sequence derived from alignment at H-akashiwo_Contig861:35256..37166- (Heterosigma akashiwo CCMP452)
AGCCAGGACAACTTGTTGGGCAGCAGATTATACAAAAGAAACTGTCACAC TCATCCTTGTCTAGCACATACACCATCTAGTACACAACTTCAGTCACAGT CTTCATTGAGTGCAATGGCTTCCTTGACCAATAGTTTAGTAAAGGCTGCT CGCCCCCTTCTGGGCCAGAGTGCTGCACGCTGCATGTCGGCAAACGCGAA GGTGTGGATAGACAAGGACACAAGAGTGATATGCCAAGGCTTCACCGGCA AGCAGGTGGGAATGCAGCGATTTAGTTCGGCCCATTTTTTGTTATTATCT CTGTGTTTGAAGTATTTATATTGAAAAGCAATACGATGTTATCATTTTTA ATACCAGGGTACCTTTCACTCGACCAACGCAATTGAGTACGGAACGAAGA TGGTTGGTGGCGTCACACCGAAAAAGGGCGGGACTGAGCACCTTGGACTC CCAGTCTTCAACACGGTAAGATCTGTGAAGTCATAAGCTCCCAGACTTTG AAGTCATAAGCTCCCAGATCTACTTGTTGACCGGCATCAACCCCATCCCC CCCTTTGTTGTTGTTAATGTACAAAGTGCTGCTTGACAAGCGATTAATAA TGCAACAACCACGAACCAAACGTTTTGTTTGAATAATAGTACTTCGATCC TGCTCATTTGCAGGTGGAAGAAGCCGCTGCAGCAGTCAAGCCAGATGCCA GCATGATTTTTGTGCCACCACCTTTCTGCGCTGCTGCAATCATCGATGCA ATCAAAGCTGAGATCCCTCTTGTTGTGGCTATCACAGAGGGAATCCCTCA GTCAGATATGGTTAAGGTAGAAAGTCATTGCCTTGTCTCTCCCCCTTTCT TTTTTACAACACACAGAGAGGTAGTTTCTATCTCTCTCATCGTGTCACGG TATTTACCCTCTCTTTGAAAATTTATTCAACAATTTATATAACATATCAA AAAAAATACTTACTTATCAAACTTATATGCCAACATTCATTCATTTGTGA ACTGTTGTATCAATCATTCAGGTGAAGTACCACCTCAGGCAGCAGTCCAA GACAAGACTTATAGGCCCTAATTGCCCTGGTATTATCAAGCCTGGGGAAG CAAAGATGGGCATCATGCCAGGATACATTCACCAAAAAGGCAGAATTGGT AAGTATTTTTTATTTAGGCAGGGCGGCACTTGTTCGCAATTCGCTAAATG ATGGGCATGAATGACATAAAACTGCTCTGGTGCTGGCAACAGCTAGCCAA GCAGAAAGCTTGCATTTTCCACACGGCCGGGACCCTCACCCCCCTCCTCT CTGTTCGCCAGGCGTGGTCTCCCGCAGCGGCACGCTGACCTACGAGGCGG TCCACCAGACCTCGGCCGTGGGCCTGGGGCAGTCCACCTGCGTGGGCATC GGCGGGGACCCCTTCAACGGGACCAACTTCATCGACTGTCTCGAGCGCTT TACCCACGACCCCCAGACGGAAGGTGGGCGACCGGCTGCCTGCCCGCGCC GCAGTGTGGCAATAGGACCAAACAGACAGACGGTTGTTCATTTTGATGCA ACGCTCTGCATGGGGTACTTGAAGGGACTAGCTTAACTCTATAGCGTGCG TGGCACACACACACACACATATATATATATTATCGTGGCAATGCATCATA CATACAACATGAAAAGATCATGTAATGGTGCATGCAGTGAGGTTTTCGCA GTGAGGTTGTGTCTGGCTCAGCAGGGGCGTGTCGGCGGGCGCGCCCCTCG GCGCTCATGGGGGGCCGCGCCCGCCGCCGCAGGCATCATCATGATCGGCG GATCGGCGGCTCAGCGGAGGAGGCGGCGGTGGCTGATGGAGCACGGCGAC CAACAAGCGGTGGCCGCCTTCATCAGCGGGCACGACCGCGCCCCCCGGCC GCCGAATGGGT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig861:35256..37166-

>mRNA_H-akashiwo_Contig861.1.1 ID=mRNA_H-akashiwo_Contig861.1.1|Name=mRNA_H-akashiwo_Contig861.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=933bp|location=Sequence derived from alignment at H-akashiwo_Contig861:35256..37166- (Heterosigma akashiwo CCMP452)
AGCCAGGACAACTTGTTGGGCAGCAGATTATACAAAAGAAACTGTCACAC
TCATCCTTGTCTAGCACATACACCATCTAGTACACAACTTCAGTCACAGT
CTTCATTGAGTGCAATGGCTTCCTTGACCAATAGTTTAGTAAAGGCTGCT
CGCCCCCTTCTGGGCCAGAGTGCTGCACGCTGCATGTCGGCAAACGCGAA
GGTGTGGATAGACAAGGACACAAGAGTGATATGCCAAGGCTTCACCGGCA
AGCAGGGTACCTTTCACTCGACCAACGCAATTGAGTACGGAACGAAGATG
GTTGGTGGCGTCACACCGAAAAAGGGCGGGACTGAGCACCTTGGACTCCC
AGTCTTCAACACGGTGGAAGAAGCCGCTGCAGCAGTCAAGCCAGATGCCA
GCATGATTTTTGTGCCACCACCTTTCTGCGCTGCTGCAATCATCGATGCA
ATCAAAGCTGAGATCCCTCTTGTTGTGGCTATCACAGAGGGAATCCCTCA
GTCAGATATGGTTAAGGTGAAGTACCACCTCAGGCAGCAGTCCAAGACAA
GACTTATAGGCCCTAATTGCCCTGGTATTATCAAGCCTGGGGAAGCAAAG
ATGGGCATCATGCCAGGATACATTCACCAAAAAGGCAGAATTGGCGTGGT
CTCCCGCAGCGGCACGCTGACCTACGAGGCGGTCCACCAGACCTCGGCCG
TGGGCCTGGGGCAGTCCACCTGCGTGGGCATCGGCGGGGACCCCTTCAAC
GGGACCAACTTCATCGACTGTCTCGAGCGCTTTACCCACGACCCCCAGAC
GGAAGGCATCATCATGATCGGCGGATCGGCGGCTCAGCGGAGGAGGCGGC
GGTGGCTGATGGAGCACGGCGACCAACAAGCGGTGGCCGCCTTCATCAGC
GGGCACGACCGCGCCCCCCGGCCGCCGAATGGG
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