mRNA_H-akashiwo_Contig854.3.1 (mRNA) Heterosigma akashiwo CCMP452
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Overview
Homology
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: A0A7R9ZKT3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKT3_9STRA) HSP 1 Score: 203 bits (517), Expect = 3.120e-59 Identity = 109/252 (43.25%), Postives = 155/252 (61.51%), Query Frame = 1
Query: 148 TSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEGKDRFFIAFFPLTDEGMFLQLWPNRCKTETTSGFIVYIPQGKLLMVPSDTVHGGGFKAGENGILRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 903
TSII+MD ++R + L ++G+L ++ + +R P + +A+V DFNEN+S+AM + R L + ++ A + + V FE L+ AVGD +I+YQGSF+KT+ T+PQP HVDF WE L + D+ FI FFPL+DEGMFLQLW N E G +V++P GKLL++P+ TVHGGGF+ E+G RFHLY+AS G LP NKYTE ++ +E+ +RL D+ L L F
Sbjct: 132 TSIILMDGINSRCMQTLSQYNGRLSNLDPSFVRHVRSIMP-NQPSARVADFNENISFAMLNQRKLRHLASRS--------AEKDQESIVADLVDEFENKLRWAVGDD--VIDYQGSFLKTEATVPQPAHVDFTWEYLDQEDDKLFIGFFPLSDEGMFLQLWCNTKPGEPELGQMVFVPPGKLLVLPASTVHGGGFRTCESGNPRFHLYIASHGRPLPDHQQNKYTERNNKARELCERLTDAQGLDVLTDVLF 372
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: B8C3F2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3F2_THAPS) HSP 1 Score: 200 bits (508), Expect = 4.700e-58 Identity = 120/302 (39.74%), Postives = 180/302 (59.60%), Query Frame = 1
Query: 46 NDEDEPEWDAILPQNAVFDGHSRSELRHFYDQLRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQD-GRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEGKDRFFIAFFPLTDEGMFLQLWPNRCKTE-----TTSGFIVYIPQGKLLMVPSDTVHGGGFKAGENGILRFHLYV--------ASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFFDN 909
N+ + +D LP N HS +E H +SI+V+D S + Q LL+T+ L D+ + L+E +RD P L AA+VGDFNENL Y MQD + + S+I ++ G+ G + L ++V FE+A++EA+ ++Y+GS+++T+ T+ QP HVD+ + +L++ + F+AFFPLT EG FLQLW K + T G +VY+P GK+L+VPSDT+HGGGFK G G LRFHLY+ A L N+YTEE D +E+ +R +D++ L L+G FF++
Sbjct: 71 NNSNSLHFDLNLPPN-----HSLTEDEHHLCDALSSIVVLDSHSCKVQGLLDTYSAHLIDMGNHLLEGLRDCAPTQL-AARVGDFNENLFYEMQDCEKDIGSII----LDSGVVGGDVDRIL-LNKDVQEFESAIREALKHDK--LDYRGSYLQTEQTMYQPAHVDYDYHILKQYGGKLFLAFFPLTTEGTFLQLWKATTKDDYDDSTTVEGTVVYVPYGKMLIVPSDTIHGGGFKRGCTGNLRFHLYIELLEDDNEAFQQGELLNHPMNRYTEEHDRRRELCERFVDANGLDRLLGVFFED 359
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: K0S6F9_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6F9_THAOC) HSP 1 Score: 191 bits (484), Expect = 1.320e-53 Identity = 107/267 (40.07%), Postives = 157/267 (58.80%), Query Frame = 1
Query: 154 IIVMD-PCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGR-GLLSVIQQA--RMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEGKDRFFIAFFPLTDEGMFLQLWPNRCKTET-TSGFIVYIPQGKLLMVPSDTVHGGGFKAGENGILRFHLYVA-----------SGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFFD 906
++ +D P +L+ D +L V + L+ +R+ P D AA+VGD+NENL Y M+ G + +I+ A R++ G +G+ + + +V FE +L+ A+G + Y+GSFM+TD +IPQP HVD+ + +L E R +AFFPLT+EG +LQLW + E T G +V+IP G++L+VPSDT+HGGGF+ G G LRFHLYV GG L N+YTE D +E+ +R +D+ L LVG FFD
Sbjct: 179 VVALDSPSRPEVAAILQRHDARLVHVGADLLRGLREAAP-DRLAARVGDYNENLMYEMRGGDLDVAGIIRSAGRRLDDGGDGSARDHGGMPVDDVRDFETSLRRALGHDD--LRYRGSFMRTDVSIPQPAHVDYDYPVLSEHGRRLHLAFFPLTEEGCYLQLWQHEDDAEVETEGTVVHIPHGRMLIVPSDTIHGGGFRRGPTGNLRFHLYVELLGDGNTEEEEDGGPRLLDRPVNRYTERHDRRRELCERYVDARGLDRLVGTFFD 442
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: A0A7S2IH65_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IH65_9STRA) HSP 1 Score: 182 bits (461), Expect = 8.740e-52 Identity = 108/274 (39.42%), Postives = 155/274 (56.57%), Query Frame = 1
Query: 106 HSRSELRHFYDQLRTS-------IIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEGKDRFFIAFFPLTDEGMFLQLWPNRCKTETT-SGFIVYIPQGKLLMVPSDTVHGGGFKAGENGILRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 903
H E R D L+ I+V+D S R Q+ L +F G L ++ I+ ++ P+ A+V DFN+NL Y MQ +GL + + E LLQ G ++ ++ GS++ TDTTIPQPPHVD+ WE+L+E + FFPLT+EGMFLQ+WP R K E G IV++P GKLL++P+ T+HGGGF+ NG LRFHLY+++ LP TNKYTE DD ++E+S+R +++ +KEL+ F
Sbjct: 55 HGNDENRKSNDPLQNKLIEALQGIVVLDS-SVRHQKWLISFRGILHNLPEAWIQRVKAQSPIQF-TARVADFNDNLFYQMQPQKGLQHL------------GLGELQGGLLQ-------------GQANDVL---GSYLHTDTTIPQPPHVDYTWEILEEHGSDLQVGFFPLTEEGMFLQVWPTRPKEEKIIEGQIVFVPYGKLLVLPATTIHGGGFRTNTNGNLRFHLYLST--TKLPTHQTNKYTEPDDKSRELSERYVNNPHMKELLEHLF 296
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: A0A7S4T7Z9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T7Z9_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.860e-50 Identity = 104/288 (36.11%), Postives = 157/288 (54.51%), Query Frame = 1
Query: 67 WDAILPQNAVF----DGHSRSELRHFYDQLRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEGKDRFFIAFFPLTDEGMFLQLWPNR-----CKTETTSGFIVYIPQGKLLMVPSDTVHGGGFKAGENGILRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 903
W+++L N + DGH R + L+ II+ + Q L F+G L D+ LI ++ P+ +A+V DFN+NL Y MQ +GL + N +EG +++ GSF+ TD+T+PQPPHVD+ WE+L+E + FFPLT+EGMFLQ+WP + ++ G I+YIP GKLL++P+ T+HGGGF+ NG LRFHLY++ + LP TNKYTE +D ++E+S+R I++ ++EL+ F
Sbjct: 46 WNSLLQGNREYPECCDGH-----RDLIEALQKIIILNG--DRQHQSWLNDFNGTLYDLPEALIRHVKTQAPVQF-SARVADFNDNLFYQMQSQKGLQHLGLAKLQNGLLEGQANDAL----------------------------GSFLNTDSTVPQPPHVDYTWEILEEHGGELQLGFFPLTEEGMFLQVWPTQPPHGASLEKSIHGQIIYIPYGKLLVLPATTIHGGGFRTSANGNLRFHLYLSH--SKLPDHQTNKYTEPNDKSRELSERYINAPYMEELLEHLF 295
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: A0A448YY94_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YY94_9STRA) HSP 1 Score: 172 bits (436), Expect = 2.000e-47 Identity = 113/311 (36.33%), Postives = 156/311 (50.16%), Query Frame = 1
Query: 67 WDAILPQNA----VFDGHSRSELRHFYDQLRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEGKD-------RFFIAFFPLTDEGMFLQLWPNRCKTETTS----GFIVYIPQGKLLMVPSDTVHGGGFK---------------AGEN--GILRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 903
W ++ +A V +GH +SIIV+ ++ LE F G+L VSS L +E+R P + V DFN+NL Y +Q E P R A++EA+ + + EY GSF+ T +TIPQP HVD+ WE+L++ D + FFPLT+EGMFLQ+WP C + S G +V+IP GK+L++P+ T+HGGGF+ +G N G LRFHLY A+ ASLP TNKYTE D TKE+S R +DS + L+ FF
Sbjct: 66 WKNMVRSDASATXVPNGHETIHXEELLSDSLSSIIVLRDEXEHSE-WLEQFGGQLSXVSSELCQELRKHAPDLYNMSTVADFNDNLCYHVQ----------------------REKGPE--HPAPRTNRAIEEALETTLEVAEYLGSFLATKSTIPQPAHVDYPWEVLEKHGDGDHQSPGHLKLGFFPLTEEGMFLQVWPTACPXQDRSIEIEGQLVFIPYGKMLVLPASTIHGGGFRTTPFESEYSTXGSRSSGFNCGGNLRFHLYXATDDASLPAHQTNKYTERCDKTKELSRRYVDSRHMSVLLDHFF 351
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: A0A7S4ELI2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELI2_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.130e-46 Identity = 112/301 (37.21%), Postives = 150/301 (49.83%), Query Frame = 1
Query: 148 TSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQE--GKDRFFIAFFPLTDEGMFLQLWPNRC--------------------KTETTSGFIVYIPQGKLLMVPSDTVHGGGFKA---------------------------GENGILRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKELVGPFF 903
+SI+V+D + L FDG+L VSS L++E+R P + V DFN+NL Y MQ RGL + G H++ + E AL + EY GSF+ T ++IPQP HVD+ WE+L++ G +AFFPLT+EGMFLQ+WP+ K G IV+IP GKLL+VP+ T+HGGGF+ G G LRFHLY+A+ ASLP TNKYTE D TKE+S R +DS ++ L+ FF
Sbjct: 107 SSIVVLDD-EAEKKDWLNRFDGQLSVVSSELLQELRKHAPGLNTMSTVADFNDNLFYHMQQERGL----------EHFPGIGHDT-------LRELEGALLQQAN------EYLGSFLTTKSSIPQPAHVDYPWEVLEKHAGDQSLKLAFFPLTEEGMFLQIWPHAAGSGSGTMPGSSQAAADRSTEKLHAVEGEIVFIPYGKLLIVPASTIHGGGFRTTPLPMPLGREEIDAAAXXXXXXXXXXTGSGGNLRFHLYIATKDASLPAHQTNKYTERFDKTKELSRRYVDSKHMQILLESFF 383
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: A0A7S2LQ58_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQ58_9STRA) HSP 1 Score: 163 bits (413), Expect = 7.770e-45 Identity = 95/246 (38.62%), Postives = 146/246 (59.35%), Query Frame = 1
Query: 70 DAILPQNAVFDGHSRSELRHFYDQLRTSIIVMDPCST---RAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEGKDRFFIAFFPLTDEGMFLQLWPNRCKTETTSG-------FIVYIPQGKLLMVPSDTVHGGGFKAGENGILRFHLYVA 777
DA L + + D + +++ + D I+++ ST Q LL + G L D S L+E +R+ P L AA+VGD+NENL Y MQD +S I ++G H+ L +++ FE+++ ++ ++ + Y+GSFM+T++TI QP HVD+ + +L++ + F+AFFPLT EG +LQLW K E G +V+IP GK+L++PSDT+HGGGFK G +G LRFHLY+A
Sbjct: 35 DANLTKKHINDNDTINKVHNTPD------IIIELNSTSCPNVQSLLSAYKGHLVDAGSCLLESLRNTAPQQL-AARVGDYNENLFYEMQDNDKDISGI--------IDGVEHDDQ-QLQEDIDAFESSICSSLQHTN--LTYRGSFMRTESTIYQPAHVDYDYPILEQYGTKLFLAFFPLTKEGAYLQLWQEPSKEENDGGGDEPIEGTVVFIPYGKMLIMPSDTIHGGGFKRGSSGNLRFHLYIA 262
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: A0A1Z5KM92_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KM92_FISSO) HSP 1 Score: 161 bits (408), Expect = 2.280e-43 Identity = 109/324 (33.64%), Postives = 164/324 (50.62%), Query Frame = 1
Query: 4 GKQLFRVLLEKVRSNDEDEPEWDAILPQNAVFDGHSRSELRHFYDQLRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLLQEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEGKDRFFIAFFPLTDEGMFLQLWPNRCKTETTSGFIVYIPQGKLLMVPSDTVHGGGFKA---------------------------GEN---GILRFHLYVASGGASLPITHTNKYTEEDDPTKEMSDRLIDSSCLKE 885
G+ L+ +LL + D D +W + + + ++ +L +R+ +I+ D R +++L ++GK+ V L EE+ P D A V DFN+NLSY MQ RG + ++ E E+A FE ++E + S IE Q SF+KTD T+ QP HVD+ W++L E D ++AFFPLT +GM LQLWP + G +V+IP GK+L+VPSDT+HGGGF+ EN G +R+HLY+A+ G SLP N YT + D +E+S ++S + E
Sbjct: 33 GQLLWNLLLNRKIPEDGD-VDWLILKREYPLLSSVTQIKLIELLMVIRSIVILDDSIDDRVEQVLAEYNGKIVVVRRNLTEELYRLSP-DRFHAHVADFNDNLSYCMQTTRGFPANPSMLTADEWEE------------EIALFEKDVKEKL--KSCHIEVQSSFLKTDKTVAQPAHVDYSWKVLSERADELWLAFFPLTSQGMILQLWPPH----GSQGLLVFIPLGKMLLVPSDTIHGGGFRTFPIHDLGTRDESYESESANHTHNDECDKENVYVGNMRYHLYIATHGKSLPKFAQNVYTIKGDKRRELSQVCTNASGVNE 336
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Match: A0A1Z5KMN6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMN6_FISSO) HSP 1 Score: 160 bits (406), Expect = 3.800e-43 Identity = 105/313 (33.55%), Postives = 162/313 (51.76%), Query Frame = 1
Query: 1 VGKQLFRVLLEKVRSNDEDEPEWDAILPQNAVFDGHSRSELRHFYDQLRTSIIVMDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLSYAMQDGRGLLSVIQQARMNQGMEGAVHESSPHLL------QEVARFEAALQEAVGDSSGIIEYQGSFMKTDTTIPQPPHVDFKWELLQEGKDRFFIAFFPLTDEGMFLQLWPNRCKTETTSGFIVYIPQGKLLMVPSDTVHGGGF------KAGENGI-----------------LRFHLYVASGGASLPITHTNKYTEEDDPTKEMS 852
VG+ L+ +LL++ S + W + + + + +L +R+ +I+ + R +++L ++G++ DV L +E+ P A V DFN+NLSY MQ RG ++P +L QE+ARFE A++E + S I+ Q SF++T T+ QP HVD+ W++L E D ++AFFPLT +GM LQLWP + G +V+IP GK+L+VPSDT+HGGGF K G +G +R+HLY+A+ G SLP N YT + D +E+S
Sbjct: 32 VGQLLWNLLLDRKLSTSGN-VNWLILKREYPLLSSVTPQKLTELLMVIRSIVILDEEIDDRVEQVLADYNGEVLDVRRNLTDELYRLSPARFHA-HVADFNDNLSYCMQTTRGF------------------PANPKMLTADEWEQEIARFEKAVKEKL--DSCHIQVQSSFLRTVKTVAQPAHVDYSWKVLSERADELWLAFFPLTTQGMILQLWPPH----RSQGLLVFIPLGKMLLVPSDTIHGGGFRTFSIQKQGSHGAQITQTDECDKENVYVGNMRYHLYIATHGKSLPKFAQNVYTVKGDKRRELS 318 The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig854.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig854.3.1 >prot_H-akashiwo_Contig854.3.1 ID=prot_H-akashiwo_Contig854.3.1|Name=mRNA_H-akashiwo_Contig854.3.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=251bp MDPCSTRAQRLLETFDGKLCDVSSVLIEEMRDDKPMDLGAAKVGDFNENLback to top mRNA from alignment at H-akashiwo_Contig854:129880..130855+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-akashiwo_Contig854.3.1 ID=mRNA_H-akashiwo_Contig854.3.1|Name=mRNA_H-akashiwo_Contig854.3.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=976bp|location=Sequence derived from alignment at H-akashiwo_Contig854:129880..130855+ (Heterosigma akashiwo CCMP452)back to top Coding sequence (CDS) from alignment at H-akashiwo_Contig854:129880..130855+ >mRNA_H-akashiwo_Contig854.3.1 ID=mRNA_H-akashiwo_Contig854.3.1|Name=mRNA_H-akashiwo_Contig854.3.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=753bp|location=Sequence derived from alignment at H-akashiwo_Contig854:129880..130855+ (Heterosigma akashiwo CCMP452)back to top |