|
Homology
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: A0A6H5JVX5_9PHAE (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVX5_9PHAE) HSP 1 Score: 181 bits (458), Expect = 5.240e-50 Identity = 96/195 (49.23%), Postives = 130/195 (66.67%), Query Frame = 2
Query: 344 KATQDEWKQFGRLAGQEKVLLVCSIASLILAAFCEVAFPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALA 928
KA +D W+ G L + +L+ S+ +L+LAA CEVA PHYS++ALNA A D F ++L+ MV + L+ + TG RG FWL+G VV ++R L S++L +DIS+ D ETG LTSRL+SDT K+ NVV FH NIL R++IQA GG+ YL+ L R+LA VA+ L+L T+ Y SRR+S VQ ALA
Sbjct: 165 KAPRDAWRYMGTLVRSQTGVLLASVVTLVLAAACEVAVPHYSSRALNAAAFANDRVEFARSLQGMVAYSLLASVFTGLRGACFWLAGTHVVAKVRFDLLSSLLKQDISFHDSNETGALTSRLASDTAKISNVVSFHVNILCRQVIQAVGGLGYLYMLERQLACVALVGLVLVGGITTAYGRFSRRISAKVQTALA 359
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: D7G5Q1_ECTSI (ATP-binding cassette, sub-family B, member 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q1_ECTSI) HSP 1 Score: 182 bits (461), Expect = 8.820e-49 Identity = 96/195 (49.23%), Postives = 131/195 (67.18%), Query Frame = 2
Query: 344 KATQDEWKQFGRLAGQEKVLLVCSIASLILAAFCEVAFPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALA 928
KA +D W+ G L ++ +L+ SI +L+LAA CE+A PHYS++ALNA A D F ++L+ MV + L+ + TG RG FWL+G VV ++R L S++L +DIS+ D ETG LTSRL+SDT K+ NVV FH NIL R++IQA GG+ YL+ L R+LA VA+ L+L T+ Y SRR+S VQ ALA
Sbjct: 30 KAPRDAWRYMGTLVRSQRGVLLASIVTLVLAAACEIAVPHYSSRALNAAAFANDRVEFARSLQGMVAYSLLASVFTGLRGACFWLAGTHVVAKVRFDLLSSLLKQDISFHDSNETGALTSRLASDTAKISNVVSFHVNILCRQVIQAVGGLGYLYMLERQLACVALVGLVLVGGITTAYGRFSRRISAKVQTALA 224
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: A0A7S2HIK7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HIK7_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.530e-33 Identity = 81/191 (42.41%), Postives = 120/191 (62.83%), Query Frame = 2
Query: 359 EWKQFGRLAGQEKVLLVCSIASLILAAFCEVAFPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALAS 931
EW + RLA +K +++ S+ SL+LAA C+ A PHYSA AL A+ D + +++S+V + L TG RG FF ++G RVVTRLR LF+ +L +++++FD +TG LTSRL++D KL NVV +H NI++R+ I A G+ YLF + +A +S L+ S + L SR LS +QD +AS
Sbjct: 94 EWARLWRLAAADKNVMLVSVVSLVLAAVCDAAVPHYSAMALTAVTA-SDSNRIVTSIRSLVGVSMGSALFTGLRGAFFTVAGARVVTRLRDALFTNLLKQEVAFFDAHDTGELTSRLNADAAKLANVVSYHVNIIVRQTITATIGLGYLFVMDPLIATYTLSGLVFMSIMSWLNGSFSRWLSEKLQDEVAS 283
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: A0A8J2SL18_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL18_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.930e-32 Identity = 83/195 (42.56%), Postives = 114/195 (58.46%), Query Frame = 2
Query: 344 KATQDEWKQFGRLAGQEKVLLVCSIASLILAAFCEVAFPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALA 928
+A++ +W Q L ++ LL + +L AA +VA PHYS+ AL A+ + +D L + + L TG RG FWL+G RVVTRLRL LF AML +DI++FD T TG L SRLS D K+ +VV F+ NI+ R+ +QA GG YL L LAA+++ + L S T Y +SR+ SR D LA
Sbjct: 56 RASKAQWAQLRELVRKDWPLLGAASVALTGAALADVAVPHYSSGALTAV-VAKDAARVRAQLWGLSIASLASATFTGVRGGLFWLAGTRVVTRLRLALFGAMLRQDIAFFDSTSTGELASRLSGDAAKVSDVVSFNLNIIARQTLQAIGGCVYLVALDPPLAALSLCGMALASFLTDAYGRLSRKYSRETSDRLA 249
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: F0YIK4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIK4_AURAN) HSP 1 Score: 112 bits (281), Expect = 2.470e-24 Identity = 62/117 (52.99%), Postives = 83/117 (70.94%), Query Frame = 2
Query: 578 RGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALA 928
RG FWL+G+RVV+RLR+ +FSAML +D+ +FDET TG L SRLSSD ++ +VV F+ NIL R+ IQA GG+AYL +L RLAA+ V+ + L S +Y SRR ++ QD LA
Sbjct: 2 RGGLFWLAGVRVVSRLRVRMFSAMLRQDLGWFDETSTGSLNSRLSSDATRVADVVSFNLNILARQSIQALGGVAYLCYLDGRLAALTVAFMGLASVFADVYGRASRRFAKDTQDRLA 118
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: A0A7S2KFN2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KFN2_9STRA) HSP 1 Score: 109 bits (272), Expect = 6.560e-23 Identity = 62/188 (32.98%), Postives = 103/188 (54.79%), Query Frame = 2
Query: 365 KQFGRLAGQEKVLLVCSIASLILAAFCEVAFPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALA 928
K L G +LV S+ L+L AF E PHY + L+ +A + + + + + L TG RG FW++G R +R+ L +L ++ ++FDETETGVL SRL+SD K+ V+ FH N+++R+ Q G Y+ + +RL+A+A + + + + + +Y+ + L+ VQD LA
Sbjct: 25 KDIINLVGFNSSILVSSMTFLVLGAFMESTVPHYYGKCLSCVANGASQVSLVNAMIGLGITSTLAALFTGLRGSLFWMAGSRANYSVRVKLHRNLLRQEAAFFDETETGVLISRLNSDVNKIGMVISFHVNVVLRQTAQLIFGTIYMMKVSKRLSAIAYAGMAVVALVSGVYANFANMLAGKVQDLLA 212
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: A0A1S3NP40_SALSA (ATP-binding cassette sub-family B member 9-like n=41 Tax=Salmonidae TaxID=8015 RepID=A0A1S3NP40_SALSA) HSP 1 Score: 107 bits (268), Expect = 2.490e-22 Identity = 66/202 (32.67%), Postives = 113/202 (55.94%), Query Frame = 2
Query: 341 KKATQDEWKQ---FGRL---AGQEKVLLVCSIASLILAAFCEVAFPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALA 928
+K TQD+ GRL ++ LL ++ L+++A CE P+Y QA++A+ IH+ F K L ++ V L + G RG F L+ R+ RLR LLF +++ ++I +FD TG +TSRLSSDT ++ +++ + N+ ++ L+Q G ++F + +LA V + + + +Y +RL++ VQ ALA
Sbjct: 194 RKGTQDQTDSGATMGRLLSYCSKDAGLLSVAVLFLLISAVCEAFIPYYIGQAIDAVVIHKSMEYFTKPLITLTVLALASSIAFGVRGGLFSLTFARLNLRLRNLLFRSLMRQEIGFFDANHTGDITSRLSSDTTQVSDLISQNVNMFLKSLVQGIGFFIFMFGISWKLALVTIMGFPFIAVISKVYGEYYKRLTKEVQTALA 395
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: W5L3H5_ASTMX (ATP-binding cassette, sub-family B (MDR/TAP), member 9 n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=W5L3H5_ASTMX) HSP 1 Score: 105 bits (262), Expect = 1.490e-21 Identity = 63/200 (31.50%), Postives = 110/200 (55.00%), Query Frame = 2
Query: 338 GKKATQDEWKQFGRLAG---QEKVLLVCSIASLILAAFCEVAFPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALA 928
G K + GRL ++ LL + L+L+A CE +FP+Y+ QA++ I IH+ F + + + V LV L GFRG F L+ R+ RLR LLF +++ ++I +FD TG +TSRL+SDT ++ +++ + N+ +R ++ G ++F + +L+ V + + LY ++L++ VQ +LA
Sbjct: 184 GAKGQPNSGATVGRLLSYCKKDSGLLTVAFFFLLLSAVCEPSFPYYTGQAIDGIVIHKSMQFFTRPMIILSVLALVSSLAIGFRGGVFSLTFARLNIRLRNLLFRSLMHQEIGFFDANHTGDITSRLTSDTTQVSDLISQNVNLFLRSFVKGVGFFIFMFGMSWKLSLVTIMGFPYIGVVSKLYGEYYKKLTKEVQTSLA 383
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: UPI0015B3046B (ATP-binding cassette sub-family B member 9 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B3046B) HSP 1 Score: 103 bits (258), Expect = 5.050e-21 Identity = 58/176 (32.95%), Postives = 103/176 (58.52%), Query Frame = 2
Query: 401 LLVCSIASLILAAFCEVAFPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALA 928
LL + L+L+A CE P+Y+ A++ I IH+ F K + ++ V LV + G RG F ++ R+ RLR LLF +++ ++I +FD TG +TSRL+SDT ++ +++ + N+ +R L++A G ++F + +L V + + ++LY ++L++ VQDALA
Sbjct: 210 LLTVAFIFLLLSAICEAFIPYYTGLAIDGIVIHKSMEHFTKPMVTLTVLALVSSIAIGVRGGVFSVTFARLNVRLRNLLFRSLMRQEIGFFDANHTGDITSRLTSDTTQVSDLISENVNLFLRSLVKALGFCFFMFGMSWKLTVVTIMGFPFIAVISALYGEYYKKLTKEVQDALA 385
BLAST of mRNA_H-akashiwo_Contig850.16.1 vs. uniprot
Match: A0A5N5K9Q5_PANHP (Uncharacterized protein n=3 Tax=Siluroidei TaxID=1489793 RepID=A0A5N5K9Q5_PANHP) HSP 1 Score: 103 bits (257), Expect = 6.750e-21 Identity = 57/176 (32.39%), Postives = 104/176 (59.09%), Query Frame = 2
Query: 401 LLVCSIASLILAAFCEVAFPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSGIRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHFNILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLSRGVQDALA 928
LL + L+L+A CE P+++ +A++ I IH+ F+K + + V LV L GFRG F L+ R+ RLR LLF +++ ++I +FD TG +TSRL+SDT ++ +++ + N+ +R ++A G + ++F + +L+ V + + + LY ++L++ VQ +LA
Sbjct: 196 LLSLAFFFLLLSAVCEAFIPYFTGKAIDGIVIHKSMEYFIKPMVILTVLALVSSLAVGFRGGVFSLTFARLNIRLRNLLFRSLMRQEIGFFDANHTGDITSRLTSDTTQVSDLISQNVNLFLRSFVKAVGFLIFMFGMSWKLSLVTIMGFPYIAVVSKLYGEYYKKLTKEVQTSLA 371
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 0 |
Start | 1 |
Seed ortholog | 2880.D7G5Q1 |
PFAMs | ABC_membrane,ABC_tran |
Model size | 931 |
Max annot lvl | 2759|Eukaryota |
KEGG ko | ko:K05656,ko:K05657 |
KEGG TC | 3.A.1.201,3.A.1.209 |
KEGG Pathway | ko02010,ko04142,map02010,map04142 |
Hectar predicted targeting category | signal peptide |
GOs | GO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009536,GO:0009941,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464 |
Exons | 8 |
Evalue | 1.4e-49 |
EggNOG OGs | COG1132@1|root,KOG0058@2759|Eukaryota |
Ec32 ortholog description | ABC transporter-like |
Ec32 ortholog | Ec-12_008700.1 |
Description | ATPase activity, coupled to transmembrane movement of substances |
Cds size | 927 |
COG category | V |
BRITE | ko00000,ko00001,ko02000 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681388012.216683-CDS-H-akashiwo_Contig850:468200..468350 | 1681388012.216683-CDS-H-akashiwo_Contig850:468200..468350 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig850 468201..468350 - |
1681388012.2382877-CDS-H-akashiwo_Contig850:468745..468868 | 1681388012.2382877-CDS-H-akashiwo_Contig850:468745..468868 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig850 468746..468868 - |
1681388012.2502959-CDS-H-akashiwo_Contig850:469013..469138 | 1681388012.2502959-CDS-H-akashiwo_Contig850:469013..469138 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig850 469014..469138 - |
1681388012.2672021-CDS-H-akashiwo_Contig850:473845..473930 | 1681388012.2672021-CDS-H-akashiwo_Contig850:473845..473930 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig850 473846..473930 - |
1681388012.275884-CDS-H-akashiwo_Contig850:475713..475783 | 1681388012.275884-CDS-H-akashiwo_Contig850:475713..475783 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig850 475714..475783 - |
1681388012.2865045-CDS-H-akashiwo_Contig850:475937..476044 | 1681388012.2865045-CDS-H-akashiwo_Contig850:475937..476044 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig850 475938..476044 - |
1681388012.2952166-CDS-H-akashiwo_Contig850:476207..476262 | 1681388012.2952166-CDS-H-akashiwo_Contig850:476207..476262 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig850 476208..476262 - |
1681388012.3034296-CDS-H-akashiwo_Contig850:476375..476587 | 1681388012.3034296-CDS-H-akashiwo_Contig850:476375..476587 | Heterosigma akashiwo CCMP452 | CDS | H-akashiwo_Contig850 476376..476587 - |
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1681388012.3143995-UTR-H-akashiwo_Contig850:476587..476591 | 1681388012.3143995-UTR-H-akashiwo_Contig850:476587..476591 | Heterosigma akashiwo CCMP452 | UTR | H-akashiwo_Contig850 476588..476591 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-akashiwo_Contig850.16.1 >prot_H-akashiwo_Contig850.16.1 ID=prot_H-akashiwo_Contig850.16.1|Name=mRNA_H-akashiwo_Contig850.16.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=309bp
MGSLTSLSRRLKVSALVCFALLQLIQGFTFLRPSLLSTQKYYLKQAPVGR HNERYLNPYLPLTESSEGPLIEEDDDDIFSVVEFTGPRQMIGDAVSCAKL AYIEAIDRFFNGKKATQDEWKQFGRLAGQEKVLLVCSIASLILAAFCEVA FPHYSAQALNAIAIHQDYPVFLKNLKSMVVFGLVGPLLTGFRGVFFWLSG IRVVTRLRLLLFSAMLDKDISYFDETETGVLTSRLSSDTKKLENVVGFHF NILMRELIQAAGGIAYLFHLHRRLAAVAVSALLLTSSATSLYSIVSRRLS RGVQDALAS back to topmRNA from alignment at H-akashiwo_Contig850:468201..476591- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-akashiwo_Contig850.16.1 ID=mRNA_H-akashiwo_Contig850.16.1|Name=mRNA_H-akashiwo_Contig850.16.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=8391bp|location=Sequence derived from alignment at H-akashiwo_Contig850:468201..476591- (Heterosigma akashiwo CCMP452) CAGCATGGGCAGCTTAACAAGCCTTTCGCGGCGACTAAAAGTGTCTGCAT
TGGTTTGTTTCGCGCTACTTCAGCTTATCCAAGGTTTCACGTTCCTGAGG
CCCTCGCTGCTCTCGACTCAAAAATATTATTTGAAGCAGGCCCCTGTAGG
ACGTCACAATGAAAGATATCTCAACCCTTACTTGCCTTTGACGGAATCAA
GTGAAGGGCCATTAATGTATGTGACCATAAAATTGAACACCATGTGTTTC
TTCTGAACGAATGTTGAAGGCTGGATTGCCATCTTTTCTTGATCCTCGTC
GTTTCCCCTTGGCCTATTTTACAACACAGAGAGGAGGATGACGACGATAT
ATTTTCAGTGGTGGAATTCACAGGCCCACGTCAGGTTTGAGGTCTCACTT
TTAGTATAGTAGTTTTTTTTTATTGGAAATATACTCTTTCAAAGAGCTTG
ATCACTAGATAAGCTACTCTCTTGGTTGCGCTGGGGCATCTTCATCGTGC
GTACTTAAAAAAAATAAAAACAAAAACAAACTATAATAACTTGATAGATG
ATAGGTGATGCAGTTTCGTGCGCCAAATTGGCATACATTGAAGCGATTGA
TAGGTTTTTCAACGGGAAAAAGGCAACACAGGATGAATGGAAACAGTTTG
GAAGGTACAGTTACAGTGCGGCATCGCAAAGGCTTTATACTCTGCATCTA
ATGGACTGCTGCTGCTTTTACAAACACATGTTTTTTTCACCAGCAGAATT
TATGTATATTGACTGTGTTGACCACTATCTTTGATGTCATATGTGCTGAT
GAAAACAGGCTGGCTGGGCAGGAAAAGGTTTTATTGGTGTGCAGTATTGC
CTCTTTGATACTTGCGGCATTCTGCGAGGTATTCTCCATACATGCATTGC
TTTTTTACCCACCCATTTTTTGCTTTCATTGCATTTCAAACATGGTGGTG
AGGATTAAAATGATTATGAAAAAATGTATAGCATCACACTGATTATGCTG
GCTGCTGAATGATGGTGTGCCAGAGAAGCTAACAATATAGAAACATCATA
GAAATTCACAGGCAGGCAGGGCTAGTTGTTTCTGGCTTTTGGCAGGGGGT
AGATCAGATCCCCAAAAATGCTTTAGCATCATGCTTTTATTTTGCTGGCT
TCTTAATAGTTGTTGGCTCCAGGCAGGGGGTATGGTGGATTATACTGAAA
AATTACCTCCTCAACCGATGATGTTCGTCCCACCGGATATATTAGGATCA
GATCCCACCCATGGGACTGAGAAACGAACACTTTTTTTCGTACGACCACT
CCGACAACAAATCCTTCAGGTGGGACAACCCAAAAAAAAACGGAGACGAA
GACCATATCCCACTGGTGGGATCACAACAATAAATCCCACCGGTGGGATC
TTATTTATCCCACCGGAGAGATATTGAGAAATCTCAGTATTACATTAACA
TACTTACTGCACATATTTACAGTCTGAACAGACAGATGGGCCATCAGTGA
TTGTGCAATCTTGGCACCTCACAATTTCAGTGAAGCAGGTAAAAGAGGAT
TTTTAATGGTTAGATACAAAGAACTATACTACTCTTGACTCCTATCCTAC
AATGCAAAAAGACTCCGAGTTTCGCCAATACCAGGCCACCAGCAGCAGAG
GCTGCTGGGTTTTCATCAGTTTTGCTGGCAGGTGGGAATGGTGGAGTGAC
CGGAGCCCTGTAGCAGGCTTCTCAGTGTACATGTTGTAGTTGCAGTCTGA
TGATGCTGCTGCTGCTGCATGTTGTGAGAAGAAGTGTAACTGCTGTTGTT
GATTTTGGCAAATCAAAAAGTTTGATTTTTCAACAACGCCCCAGAATGGT
CGAATTCTTCAACTTCCATCTTTTTTCCAAACTTAACTGCTTGGGCGTTG
TAGAAAAATCAAACTTTTTGATTTGCCAAAAATCAACAACAGCAGTTACA
CTTCTTCTCACAACATGGCAGCAGCAGCAGCATCATCAGACTGCAACTAC
ATCATGTACACTGAGAAGCCTGCTACAGGGCTCCGTCACTCCACCATTCC
CACCTGCCAGCAAAACTGATGAAAAACCCAGCAGCCTCTGCTGCTGGTGG
CCTGGTATTGGCCGAAACTCGGAGTCTTTTGCATTGTAGGATAGGAGTCA
AGAGTAGTATAGTTCTTTGTATCTAACCATTAAAAAATTCCTCTTTTACC
TGCTTCACTGAAATTGTGAGGTGCCAAGATTGCACAATCACTGATGGCCC
ATCTGTCTGTTCAGACTGTAAATATGTGCAGTAAGTATGTTAATGTAATT
TCAAGAAAGTCTGAATCCCTGATACCAGTAACAATAAAATCTCAGTATCT
CCAGTGATTCAACTTTCAGCCCGCCCCCTTGGTACAGTTGACAGAGAATA
ACTTGCTCTTTCCAGGGCTGTAGCTGAAAGTGGCGCCCGATGTCTGGAAG
GTCGAAAATTACTCGTTTCGATGAAGTTGTCAGAGATCATGGCATCAGGC
GACATTGGAGTGAGAAGCCTGCCAGGGTGCTGGAGGGGGCATCGCCTGAA
CAAACGTAGAAAAAACTAAAAATTAAACATAGTAATGATGAGTTACATAC
TACACCATTCTTCCTCTAAAAAAAAAACTAACTAATTACAATTCCTTTTT
CTGCTTATCAGGTTGCTTTCCCGCACTACAGCGCCCAGGCACTCAATGCA
ATTGCAATACATCAGGACTACCCTGTTTTTCTAAAAAATTTGAAAAGTAA
GCCATGGCTTTTCAACTCTCTTTTACACCTTTATTTATGATGATTATTTT
TAAATGAAGAATGCAAACTTTATTGTGCTATAGTAAAGTCTTGTGCTTTG
AACCTTCTTGTACAACAAGTTCTTCAATAATAATTATTATTATTATCGCT
ATACTGATGGATAGATTATCATTTGATATATATTTTAGATACTTAAAAGG
GGGGTCGTTGTTTTGGCGGGGCTAAAAATGACCTCCGGTCGTTTTTGACC
CAAAATAATAAACGGCGTTTTTAAAGAGAATAAAAATAATGTGTCATTAT
TGGGGTAGGCCACACTTGATCAAAACGAACCCTGGCTGTCTCTTGATTTT
TGGCTGCCTCCTCCGTTTGCACACACACACACCCGCTCTCAATGCCAAAA
ATCCTCCTTGTCTTACATGATGGCATCCTTTTTGGGCGAGTATGGTCTTC
CCCAACAATGACCCGTTCTTCATATATTATTATTATTGTTGCAGGGTGTT
GGGTCTAAACAGAGAACCGCTTTCAACATCAGTGAGTATAGTTCCACACT
ACCAAGAAGGCAATATGTCAAAGGTTTTTAATCATTAAGTCCATGACAAC
TATGCTGCATTTTGGCTACTAAAAGCCACGGCTGGCGGCTCTCTCCATCC
TCCGCCAGCCTTCATCAGGCTGCCTCTGACTAAAATGAGAACCAATTGAA
GATGGGAAATGAATGAAAGAAGAAGAATGGACAACAACAAAATGAAAAGC
TCCGACGGCTGGAACCAGCCGCCGCCACCAGTCACTTGTTGCTCATGTAC
CCCAGCTGTTAAGGAAACATTCTGCCCTCCTTCTCCTCCATGTTCACAAC
AAATCTGAGCATCATCATCATAACCGGCACAGGTATTGTTGTTATTAGTT
CCCGTTGAGATGGAGCATGATGCAATCCAACAAAATTTTAGGGGTTGAAT
ATTACGAGTTGTTTGGTGATCCTTTTTCAACAAGATACATATTTGTCAGA
TTACATTTTATGCTTTTCTTCACAACAATGGTGCGAAGTAACATACATAT
ATATTATAAATGTCAGATCTTGTAATGATTTAAAGAGCTATGTGCTCTGC
TTCAGTGGTGTATGTAGGAACATAGTTTTGCAGCCTAGAGGTCCAGACTG
CTGGTGAGTCACCCAAGAAGATGATATAACCCGTAACTGACTTACCATGG
ATGCAATCTGTGCAGAAGTCTGCATCACAGTACGCACGAAGGATAGTTCC
CCCACCAAGCTTGATGGATTTGTTACCAGATCCCTTTATAGGTATTTGAA
GACTCTACCCGCGGCAGCAAAATGCTTAGCTTCGGGGTAGTTTGTAGCAC
GTTGCAGCTTATGTACGGCAAAAAAAGAGATTTCTGGCATGGACCAGGTT
GCTATCCAGTTGAGGGTGCCAACCATGGAACGGAATCTGTTGGTGTCATC
ATTGTTGTTTGCTTATATAGTATTCTTTATTTACGCTCAAGTCTATTGTT
GGGTCCATGGGAGTTTTTGGAGGGGGGTAGTGATCAAAGCCGAACTTCAC
CAGGGCATATTTGATAAACTGGGGTTGAGAAACGTGGATAGTTTTCTTGC
ACATATTTCTGTTGATCTTGAGGCCTAGGAAATTTTCCGAGCGTCCAGCA
TCTGTGATTCGGTACTTTTTCTTCAAGATTAAGAGCAGCCACTGCTCTAT
CATCATTAGATGCGATGACGACGATGATGATTATGATGCTTTCAATTTAT
TTAATGTCCAGCCTTTTGAATAATTACAGGGACCGAAGTTCCGGCCTCCA
TACACGGACCCTTCCACTTCTAGGTCCCACTCCTCGTCTACTATTCACCA
CCCAAACTTAAGGGAAAAAAAACAACCCATACGCCATATCCACATAGATT
GTAACATAGGCAATTGAGGTACCAAACTTGCGCATATGAATGCACCCATC
TTCACTGTGAGTGAATCCATATTCACGCAGAGTTTCGTGTAGATCCGCAT
ACCAACAATGTGGTGATTGCTTTAGTCCATATATAGTGACTTCTTCAATA
TCCATACATGGTCTGGGAACTCAGGGTCGCGAAAGCCTTATGGCTGCTCC
ATATACAACTCCACAGAGAGTGAGCCATTGCTGTTTGCACACTGAGTTGG
CTTAGAGAGAGAGTCCCTATTTAGCAGCCAAGGATAAAATAATGCGAAGA
GAGGGAGCGCTTACAACGGGTGCGAAGGTAGCAGTATAGTCCACACTAGG
TTGCTGAGAGTACCTATTTGCAACAAGTCTACCTTTGTATTATTTCAGTA
CACCGTCTTCGAATTTCTTAGCGACAACCTACCTTGACATTCTTGTTAGG
TGGCCTTTCCACTGATCCAAAAGCTCTAAAGTGCTTGACGGAAGCCAGAA
ATCCAAAGAAAGCTTCATATGGAGAAATAGTCGAATTAGAAGATAAAGTT
CTGTTCATAGTATAAACTGCGTAGTGAGCAGCTTCAGACCAGAATTGTGG
AGGAAGATCAGAAGAATGAAGGACACAGTAAGAACCACATTCAGAACGAT
TCTTTTTTGCGGCTTAACCCGGTAACCATCAGGATTATCCCGGCAAGAGG
TCAATAATTCAATCCCAAGATCCTGACAGAAATTTTGAAATTCGATATAT
TCGAGACCACCATCTAAATTCTATAAAGAAAATTGTTGTGTGGCTCAGGA
TCTTCCTCGAATTATTCTCACATGGCATGAAAGCCCCCTTACAAACCAGC
CCTGAGCCCTCCACACAGATTCTCCGCGCCCAGCAACAGTTCCACATCCT
CTCCTGCTTCCAAAATGAGAGGGTGTTGGCCTCCAGACAAAACTCGCTGT
GGAGAATACCAAGCGGTCTGACACCCGGCTGCTTGTCCAATGCCAAACCC
CGAGCAGCAAGATAGGCCCAGGAGTCATCCAGAATAACTGCCTTGCACCG
CTGGTTGAGGGAGGCTGCATGCGCTGCACGAAACCTAGCGTTAGCATTGC
TATAATCTAGCAACCACCGCTGGAGCTCCGTGAAGTGAATGCCATCAGGC
CCAGCAGAGCCGTGGAGGCAAGTTTTAGCAGCTTCTAGAATGTGTTCCTA
AGTGATCACCACTTGGGAAAGAGGAGAAAGAGACTCAACTTCTTCTTTGA
ACAGAAAAACGGATAGGTCGGCTGGCGTGGCCGTTGGATGCTTTTGTTTG
AGCATTTCAAAATCCGTTAAATTTTCTGGATTTTTTGACGCTAGCTCGGC
AACTTGATTGGGATCAAGAATGTCGCCCTCGCAAAACCGTTGCGTTACGT
AACGCGTAGCTTGCTGTACCTTCCCTTGCGTCCCATCAATCGCTGAGTAA
CTTGTAGCTTCCCGTACCTTCCCTTGCACCATCAATCGCTGAAAGCGGAG
GAATTCCATCTGCTCATCCGAAGTACAAGGGTGGTTTTACTTGGGAAGCT
GGTCCTCGCATCTGAGCGCTTCATCATACAGCTCCTGGATGTTGCCCTCA
GCAAAGTCCTGCATAAGTCATTTCAGAAGCGGCTTGATGTCCCTGGCCTT
CTTGGAGTGCCTATCTCACTGAAGCACAAGGGCCTTGAACAAGAGTTTGT
GTTCTGGCGGCACTTGACCTAGAATAGTCTTTTCTTTGAGTTCAGCAACT
TTGTTGATGAATTCACGCCCTACATTCCCATCGGGCAGAGAATACAACAA
GCGAAAAAGTTTTCCGCCAAACGCTTCCACCAACATGATCTTCAATTTGC
TGGGTGGACCAACACTTGCCGCTCTCGCTGCAACATCATCGTAAGCAGTT
TCAAAGAACTGCTGCACGAAATCATCGCCAGCAATGTCCTCGCGCTGTAT
CTGAGTTTAACTGCGCTGGGTTTGATTGTTGAGAGGCTGAGAGGAAGGGT
TTTCAACCTTCGTCTCCTCCTCAGCTGCACTTCAGTTAGTGCATCTTCCC
AATTTTTTGGGGCCACAGTTCGTGCACTGGTGTCCAACCTGTCTGCATGG
GCATAATCTTGTCTTGCAAGTTGATGCCGACCGTGTTCTGTTTTAGACTT
GTGGCTCCCTGCGCATAGGCAACAGGGTCCACCTTGTCCTAGCCTAGACA
CCATTATCTTGATGCTACTCTCATAGTTGAAAATATTAATAAAGAAATGT
AAAAATAAGTGGGAATCATATGACTCCGGTCCTTGTATAGTTATCCAATG
GGCCGGACCTTCAATAAATTAAAATTATCATCATCATCATCATATGACGT
AGTATGAGAAAAATGATTGCCGATGATTGGAAAATTAGTTATCAAATATG
TTTTGGCTACTAATGGACTATTGTCTAACCTATGATTACGACCCATCGAA
AAAGCTTGAGCGTAAATATAATTCAATGAAATGTTTATATAACTGAAGAA
TCTTCCGGGTCTTTTGGTGACCCTTTTTCAACAAGGTGCCAAGCCTTAGT
AGGGTTCCTTGTCACTAAAGCTTGGCACCACCTTTTTGAAAAGGGGTCAC
CAAGCGACCCCAAATAGATTCAGTCATTTAAACAATTCGTTGGAATATAT
GTATGCTCAAGCTCAATGGGAAGTAATCACGTTTATATATTGAAAAAATC
ATGTAATCTTCTTCTATAGCAAACGATACGCCTCTCCAGCTTGCTAATTT
TTTAATCATGGCACCATTATCATCCCGCTGTTGTCATTACGCGTTTGCCC
CAGGCATGGTGGTGTTCGGTCTGGTGGGGCCGCTGCTGACCGGCTTCCGC
GGCGTCTTCTTCTGGCTCTCGGGCATCCGCGTGGTCACGCGCCTGCGGCT
GCTCCTCTTCTCCGCCATGCTGGACAAGGTGCGGCGCCGTGTGGTTGTGT
GTGTGGTTGTGTGTGTGTGGGGGGGGGCAATACATCCCACACGTACCCAG
TTTTTCCCACTTGTGGTGATGATTTTAACACAACCTCGTCGCCTTCTCCG
TTTGACTTGTCCGCGCGTTGCAGGACATATCTTATTTTGATGAAACGGAG
ACTGGGGTTCTGACAAGCAGGTTATCGTCGGACACCAAAAAGCTTGAAAA
CGTTGTTGGTTTTCATTTCAACATCCTGATGAGAGAGCTGATCCAGGTGC
GTCTGAATATTTAATATTTGTGGTGTGTACATATATATATGCGACTACAA
AAAAGTGCATGCATTGCATTTTGTTGTGTTGTTGATTCCAAATCTATGAT
ATATATGTCTGAGTTAAACTATCATCGCCGTAAGTCATAATGATAATCTT
GCTGGGCTGTAGAAAAATGCCAATTTGATCGCGGTCTTTTCTGCTTCAAA
TCAAAAACAGAAGACTACGTCACAAGCAATCCAGGGCTTGGAAAAGTGTG
TGCCTTACGGATAGTTCCGCCACGGCTCCTTCAAATGAGCCCTGCGGCAA
CCTACCAGGCCAGCAACCAACAGCTGTGCCCCCCCTGCGGCCCGCCCCCC
TTGACTACTCCCTTGCCCTTGGTCAACACGCCCTTGAGCAGGCGGCGGGC
GGCATCGCCTACCTGTTCCATCTGCACCGGCGTCTGGCGGCGGTGGCGGT
GTCGGCGCTCCTGCTCACGTCCTCCGCGACGTCGCTCTACAGCATTGTGT
CCCGGCGCCTGTCGCGGGGGGTCCAGGACGCTCTGGCGTCG back to topCoding sequence (CDS) from alignment at H-akashiwo_Contig850:468201..476591- >mRNA_H-akashiwo_Contig850.16.1 ID=mRNA_H-akashiwo_Contig850.16.1|Name=mRNA_H-akashiwo_Contig850.16.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=927bp|location=Sequence derived from alignment at H-akashiwo_Contig850:468201..476591- (Heterosigma akashiwo CCMP452) ATGGGCAGCTTAACAAGCCTTTCGCGGCGACTAAAAGTGTCTGCATTGGT TTGTTTCGCGCTACTTCAGCTTATCCAAGGTTTCACGTTCCTGAGGCCCT CGCTGCTCTCGACTCAAAAATATTATTTGAAGCAGGCCCCTGTAGGACGT CACAATGAAAGATATCTCAACCCTTACTTGCCTTTGACGGAATCAAGTGA AGGGCCATTAATAGAGGAGGATGACGACGATATATTTTCAGTGGTGGAAT TCACAGGCCCACGTCAGATGATAGGTGATGCAGTTTCGTGCGCCAAATTG GCATACATTGAAGCGATTGATAGGTTTTTCAACGGGAAAAAGGCAACACA GGATGAATGGAAACAGTTTGGAAGGCTGGCTGGGCAGGAAAAGGTTTTAT TGGTGTGCAGTATTGCCTCTTTGATACTTGCGGCATTCTGCGAGGTTGCT TTCCCGCACTACAGCGCCCAGGCACTCAATGCAATTGCAATACATCAGGA CTACCCTGTTTTTCTAAAAAATTTGAAAAGCATGGTGGTGTTCGGTCTGG TGGGGCCGCTGCTGACCGGCTTCCGCGGCGTCTTCTTCTGGCTCTCGGGC ATCCGCGTGGTCACGCGCCTGCGGCTGCTCCTCTTCTCCGCCATGCTGGA CAAGGACATATCTTATTTTGATGAAACGGAGACTGGGGTTCTGACAAGCA GGTTATCGTCGGACACCAAAAAGCTTGAAAACGTTGTTGGTTTTCATTTC AACATCCTGATGAGAGAGCTGATCCAGGCGGCGGGCGGCATCGCCTACCT GTTCCATCTGCACCGGCGTCTGGCGGCGGTGGCGGTGTCGGCGCTCCTGC TCACGTCCTCCGCGACGTCGCTCTACAGCATTGTGTCCCGGCGCCTGTCG CGGGGGGTCCAGGACGCTCTGGCGTCG back to top
|