mRNA_H-akashiwo_Contig122.18.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig122.18.1
Unique NamemRNA_H-akashiwo_Contig122.18.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 203 bits (517), Expect = 3.520e-58
Identity = 120/309 (38.83%), Postives = 173/309 (55.99%), Query Frame = 1
Query:   55 VAEHLGVAPATVQSYIKKGMIKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPM--LANGRLTDGKVGCWPVGQLQQQKKVSKNAAAGTWKFVNETIDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYK 975
            +A+  GV    +   +K   + R  + + P LT +H++ R  F + +I  R    G+  ++DM    H+DEKWF+I + +  + L  DE  P++K   K+HI+KVMFLC VARP    A+ ++ DGKVG WP  + Q  K+ SKN   GT   V  T+    Y+R ++D+V+PAI+A  P     T       +Y+Q D A  H    +DPE LAA    G++IQL  QP+QSPD NVLDLGFFN +QSL   +   ++ + LIK V  A+ +     L+  F+TLQ +M       GDN YK PH+ K
Sbjct:  106 MAKATGVPKTALWRLVKAKKLNRRTSRLRPMLTPQHRVARYNFAKSFI--RDGYQGRRQWHDMLDCVHIDEKWFYITQVNRRFYLWHDEPTPQRKAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGAT-------IYVQQDNAKPH-VAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQ-HQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKK 403          
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: E5FNA3_PHYED (Transposase n=1 Tax=Phyllostachys edulis TaxID=38705 RepID=E5FNA3_PHYED)

HSP 1 Score: 202 bits (514), Expect = 2.220e-57
Identity = 115/317 (36.28%), Postives = 181/317 (57.10%), Query Frame = 1
Query:   31 KQRRRVVDVAEHLGVAPATVQSYIKKGMIKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPMLANGRLT-DGKVGCWPVGQLQQQKKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYK 975
            KQR  + DV+  LG++ + +Q Y+KKG+++R  + + P LT  +K  RL++    I+       K+   D+     +DEKWF++ + SE Y L PDE  P +   +K +I ++MFLCV ARP   NG    DGK+GC+P+   +Q  + S+N   G       ++I+ E  +  +I+RVLPAIRA  PR   H      K +++Q D   +H K+ +DP+F       GF I+L  QP  SPD N+LDLGFF  +Q++ ++ K  K+ + LI AV +A+L+      N +F+TLQ+++    ++ G N  K PH+ K
Sbjct:  162 KQRMTIEDVSSRLGISKSRIQRYLKKGLLRRHSSSIKPYLTDANKKTRLKWCIDMIEQGLVDDPKF--RDLFDFVFIDEKWFYLSQKSERYYLLPDEDEPHRTCKNKNYIPRIMFLCVCARPRFRNGECVFDGKIGCFPLVTFEQAIRGSQNRLRGEQVIKPIQSINREVIRDFMINRVLPAIRAKWPREDVH------KPIFIQQDNVPSHLKV-DDPQFREVAKQDGFDIRLICQPPNSPDFNILDLGFFRAIQAIQYK-KDAKTLKDLIPAVQQAFLEYSPWKANRIFVTLQTVLKEAMKIKGCNKIKIPHIQK 468          
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: UPI000B8F2756 (uncharacterized protein LOC110913170 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8F2756)

HSP 1 Score: 200 bits (509), Expect = 2.580e-57
Identity = 121/318 (38.05%), Postives = 179/318 (56.29%), Query Frame = 1
Query:   31 KQRRRVVDVAEHLGVAPATVQSYIKKGMIKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPML--ANGRLTDGKVGCWPVGQLQQQKKVSKNAAAGTWKFVNE-TIDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYK 975
            ++R  +  +A+ L V+ +TV   IK+G ++     + PNLT ++K  RL F    I P  +      +YDM +  H+DEKWF++ + S+ Y L P E  P +K   KK I+KVMFL  VARP        +  GK+G +P  +L+  K+ SKN  AGT +     ++  E  +  +ID+VLPAIR   P+   HT       +++Q D A  H  + +D +F+   + GGF I+LR QP  SPDLNVLDLGFF  +QSL   ++   S + L+ AV  ++    +  LN+VFLTLQ+ M    +V G NNY+ PH+ K
Sbjct:   97 RRRTNIRSIAKALNVSKSTVHRRIKEGELRPHTNAIKPNLTEENKKERLEFCLSMITPSLSNPS---FYDMFNVVHIDEKWFYMSKPSKSYYLVPGEDEPLRKCKSKKFITKVMFLAAVARPRFDTLGNEIFSGKIGIFPFTKLEPAKRSSKNRVAGTMETKPILSVTKEVTRSWLIDKVLPAIRDKWPQG--HTG-----PIFIQQDNAKPHISI-DDEQFVQEASRGGFDIRLRFQPPNSPDLNVLDLGFFRAIQSLQ-EQEVLGSIDELVHAVQTSFHKMSSRELNNVFLTLQTCMKEIMKVHGSNNYQTPHISK 402          
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA)

HSP 1 Score: 197 bits (500), Expect = 7.520e-57
Identity = 109/289 (37.72%), Postives = 168/289 (58.13%), Query Frame = 1
Query:  115 IKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPML--ANGRLTDGKVGCWPVGQLQQQKKVSKNAAAGTWKFVNETIDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYK 975
            +KR  + + P LT KHK +R+ F++ ++  R    GK +++DM  T H+DEKWF++ + +  Y L  DE  P +K   KKHI+KVMFL  VARP     N R+ DG++G WP  + +   + SKN   G       T+  + Y+  +ID+V+PA+R+  P S  +        +++Q D A  H  +  DP  +AA   GG+ I L  QP+QSPDLNVLDLG+FN +QSL  +   + + + L+ AV +++ +     L+  F+TLQ +M    ++GGDN++K PH  K
Sbjct:    1 MKRCTSRLKPMLTDKHKSDRMAFVQRHL--RTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLWSDEAVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQ-------IWIQQDNAKPHVSV-NDPAVVAAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATY-TLDDLVVAVVKSFEELECTVLDKTFMTLQKVMECIFKMGGDNDFKLPHQKK 278          
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: UPI0009019CDE (uncharacterized protein LOC109159770 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009019CDE)

HSP 1 Score: 196 bits (498), Expect = 7.550e-57
Identity = 121/295 (41.02%), Postives = 167/295 (56.61%), Query Frame = 1
Query:  100 IKKGMIKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPM--LANGRLTDGKVGCWPVGQLQQQKKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYK 975
            +K+G +K     + P LT +++  RL+F    ID  +      F  DM    H+DEKWFF+ RTS+ Y L P+E  P +    KK I+KVMFLC VARP   L    + DGK+G +P    +  K+ SKN  AGT +    E+++ E  ++ +ID VLPAIRA  P S S       K +Y+Q D A  H  +  D EFL A    GF I L  QP  SPD+NVLDLGFF  LQSL   ++  ++ + L+ A ++A+ +   E+L++VFLTLQ  M    +  G NNYK PH+ K
Sbjct:   10 VKEGSLKSHSNAIKPMLTEENRKVRLQFCISMIDSSSPHNNPCFI-DMYDRVHIDEKWFFLSRTSQKYYLLPEEDEPYRTCKSKKFITKVMFLCAVARPRFDLERNEMFDGKIGMFPFVYKEPAKRRSKNREAGTLETKPIESVNKEVTRKWLIDYVLPAIRAKWPPSSS-------KTIYIQQDNARPHISM-NDVEFLEAAKKDGFDIHLTCQPPNSPDMNVLDLGFFRALQSLQ-HQEAPRNVDELVAATHKAFNEISVESLSNVFLTLQLCMVEVMKKFGGNNYKLPHINK 294          
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: UPI000BE4C0E8 (uncharacterized protein LOC111255881 n=2 Tax=Setaria TaxID=4554 RepID=UPI000BE4C0E8)

HSP 1 Score: 194 bits (492), Expect = 7.380e-56
Identity = 114/312 (36.54%), Postives = 176/312 (56.41%), Query Frame = 1
Query:   46 VVDVAEHLGVAPATVQSYIKKGMIKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPMLANGRLT-DGKVGCWPVGQLQQQKKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYK 975
            + DV+  LG++ + +Q Y+K+G I+R  + + P LT  +K  RL++    ID       K+   D+     +DEKWF++ + SE Y L P+E  P +   +K +I ++MFLCV ARP   NG    DGK+GC+P+   +Q  + S N   G       ++I  +  +  +I+RVLPAIRA  PR   +      K +++Q D A +H K+ +DP F A     GF I+L  QP  SPD N+LDLGFF  +Q++ ++ K  K+ + LI AV  A+L+   +  N +F+TLQ+++    +V G N  K PHM K
Sbjct:    3 IEDVSSKLGISKSRIQRYLKRGFIRRHSSSIKPYLTDDNKKTRLKWCIDMIDQGLLDDPKF--KDLFDFVFIDEKWFYLTQKSERYYLLPEENEPHRLCKNKNYIPRIMFLCVCARPRFRNGVCVFDGKIGCFPLVNFEQAIRGSHNRLRGEEVIKPIQSITRDVIRDFMINRVLPAIRAKWPREDVN------KPIFIQQDNAPSHLKV-DDPHFCAVAKQDGFDIRLICQPPNSPDFNILDLGFFRAIQAIQYK-KDAKTIKDLIPAVQEAFLEYCPKKANRIFVTLQTVLKEAMKVKGCNKIKIPHMNK 304          
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08)

HSP 1 Score: 197 bits (500), Expect = 9.220e-56
Identity = 118/317 (37.22%), Postives = 182/317 (57.41%), Query Frame = 1
Query:   34 QRRRVVDVAEHLGVAPATVQSYIKKGMIKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPML-ANGRLT-DGKVGCWPVGQLQQQKKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYK 975
            QR  +  +A +L V+  T+ ++IK+  ++     + P LT  +KL RL++    + P  T G  +F+  M +  H+DEKWF++ +TS+ Y L PDE  P +    K++I+KVMF+C V+RP   + G+ T DGKVG +P  +    ++ SKN   GT +     T++ E  +  +I +++PAI+A  P   S       K +Y+Q D A  H   A DPEF A   + GF I L  QP  SPD N+LDLGFF  +QSL   +K  ++ + L++ V +A+ +   + LN VFL+LQ+ +T   +  GDN+YK PHM K
Sbjct:   98 QRSSIRTMACNLSVSKTTIHNWIKQDKLRPHTNAIKPALTELNKLARLKWCLTQLQPSITQGKVHFH-GMHNIVHIDEKWFYMTKTSDRYYLLPDEDEPYRSCKSKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWAS-------KEIYIQQDNATPH-ITATDPEFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQ-HQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVPHMNK 404          
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: A0A448ZNT1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNT1_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.030e-55
Identity = 116/305 (38.03%), Postives = 169/305 (55.41%), Query Frame = 1
Query:   70 GVAPATVQSYIKKGMIKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPMLANGRLT--DGKVGCWPVGQLQQQKKVSKNAAAGTWKFVNETIDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYKA 978
            G+  +++   +++G +++      P LT K+KL R+ +I  +ID            D     H+DEKWF++ RT +   L P E  P+     K H++KVMFLC  ARP          DGK+G WP    +  K+ S N   GT     + +D E YKRM++++VLPAI    PR  S      P++ ++Q+D A  H K     E  AA  + G++I ++ QP  SPD+NVLDLGFFN +QSL ++++  K  + LI  V  A+ +   E LN+VFL+LQ+ M A+  V GDNNYK PHM KA
Sbjct:  211 GIPKSSLHRLVRRGDMRKHNGTTKPLLTAKNKLKRVEWILEHIDDNGRFD------DWFKWIHIDEKWFYLKRTKQTTYLLPGEAEPKSTSKSKNHMTKVMFLCATARPRWDTNNCAWFDGKIGIWPFVVKEPAKRSSVNRPKGTLVTKPQNVDGEVYKRMLLEKVLPAIYEKWPRGSS-----TPEI-FIQEDNAKPH-KATIREEVKAAAASKGWNITVKTQPPNSPDMNVLDLGFFNSIQSLQYKKRS-KDIDHLIANVEEAFDECKRETLNNVFLSLQACMEASLGVDGDNNYKLPHMGKA 501          
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: UPI0019D57972 (uncharacterized protein LOC120699683 isoform X1 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D57972)

HSP 1 Score: 198 bits (503), Expect = 1.060e-55
Identity = 115/317 (36.28%), Postives = 180/317 (56.78%), Query Frame = 1
Query:   31 KQRRRVVDVAEHLGVAPATVQSYIKKGMIKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPMLANGRLT-DGKVGCWPVGQLQQQKKVSKNAAAGTWKFVN-ETIDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYK 975
            +QR  + DV+  LG++ + +Q Y+K G+++R  + + P LT  +K  RL++    ID       K+   D+     +DEKWF++ + SE Y L PDE  P +   +K +I ++MFLCVVARP   +G    DGK+GC+P+  ++Q  + S N   G       ++I  +  +  +I+RVLPAIRA  PR   H      K +++Q D A  H K+ +DP+F       GF I+L  QP  SPD NVLDLGFF  +Q++ +++   K+ + LI  V  A+L+      N +F+TLQ+++  T ++ G NN K PH+ K
Sbjct:  171 QQRMTIEDVSNRLGISKSRIQRYLKIGVLRRHSSSIKPYLTDANKKTRLQWCIDMIDQGLLDDLKF--KDLFDFVFIDEKWFYLHQKSERYYLLPDEDEPHRTCKNKNYIPRIMFLCVVARPRFRDGVCVFDGKIGCFPLVTIEQAIRGSHNRLRGEQVIKPIQSITRDVIRDFMINRVLPAIRAKWPREDVH------KPIFIQQDNAPTHLKV-DDPQFCEVAKQDGFDIRLICQPPNSPDFNVLDLGFFRAIQAIQYKKNA-KTMQELIPVVEEAFLEYSPWKANRIFVTLQTVLKETMKIKGCNNIKIPHLQK 477          
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Match: UPI0004DE9E0C (uncharacterized protein LOC103636071 n=1 Tax=Zea mays TaxID=4577 RepID=UPI0004DE9E0C)

HSP 1 Score: 197 bits (501), Expect = 1.150e-55
Identity = 118/317 (37.22%), Postives = 176/317 (55.52%), Query Frame = 1
Query:   31 KQRRRVVDVAEHLGVAPATVQSYIKKGMIKRSKTWVSPNLTTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEGYILTPDEKAPRQKVHHKKHISKVMFLCVVARPMLANGRLT-DGKVGCWPVGQLQQQKKVSKNAAAGTWKFVNET-IDYEGYKRMVIDRVLPAIRAGCPRSLSHTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSPDLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFLTLQSIMTATSEVGGDNNYKFPHMYK 975
            K+R  + D A+ LGV   T+  ++K+G ++R  + + P+LT ++K +RL++    ++         F       F +DEKWFFI R SE Y L PDE  P +    K +I K+MFLC  ARP   NG  T DGK+GC+P+   ++ K+ S N  AGT +    T I  +  +  +I +VLP+I+A  PR   +      K +Y+Q D A +H ++  DP F  A    GF I+L  QP+ SPD N+LDLGFF  +QS+ ++ K  K+ + LI  V  A+ + P    N ++LTL  ++  T +V G N Y  PHM K
Sbjct:  139 KERTTLEDSAKVLGVCKRTLLKHVKQGKVRRHTSSIKPHLTDENKKSRLQWCVDMLEHETLHDNPRFKSIFDHVF-IDEKWFFITRKSERYYLLPDEDEPYRTCRSKNNIPKLMFLCATARPRFENGICTFDGKIGCFPLVTFERAKRSSINRPAGTMEVKPITSIKRDVVREFMIQKVLPSIKAKWPREDVN------KPIYIQQDNAPSHIEV-NDPMFCEAAQQDGFDIRLTCQPANSPDFNILDLGFFRAIQSIQYK-KSAKTVQDLIPVVQEAFHEYPPCKANRMYLTLHQVLKETMKVHGSNKYNLPHMKK 446          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig122.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A5AA16_9STRA3.520e-5838.83Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
E5FNA3_PHYED2.220e-5736.28Transposase n=1 Tax=Phyllostachys edulis TaxID=387... [more]
UPI000B8F27562.580e-5738.05uncharacterized protein LOC110913170 n=1 Tax=Helia... [more]
A0A6A4Z9D8_9STRA7.520e-5737.72Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
UPI0009019CDE7.550e-5741.02uncharacterized protein LOC109159770 n=3 Tax=Ipomo... [more]
UPI000BE4C0E87.380e-5636.54uncharacterized protein LOC111255881 n=2 Tax=Setar... [more]
UPI0020091A089.220e-5637.22uncharacterized protein LOC125206097 n=1 Tax=Salvi... [more]
A0A448ZNT1_9STRA1.030e-5538.03Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
UPI0019D579721.060e-5536.28uncharacterized protein LOC120699683 isoform X1 n=... [more]
UPI0004DE9E0C1.150e-5537.22uncharacterized protein LOC103636071 n=1 Tax=Zea m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig122contigH-akashiwo_Contig122:1461971..1462966 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog38727.Pavir.J07271.1.p
PFAMsHTH_Tnp_Tc3_2
Model size996
Max annot lvl35493|Streptophyta
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.37e-56
EggNOG OGs2CMKC@1|root,2QQNW@2759|Eukaryota,37TMG@33090|Viridiplantae,3GG9M@35493|Streptophyta,3M58A@4447|Liliopsida,3IN47@38820|Poales
Cds size996
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681387125.015247-CDS-H-akashiwo_Contig122:1461970..14629661681387125.015247-CDS-H-akashiwo_Contig122:1461970..1462966Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig122 1461971..1462966 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig122.18.1prot_H-akashiwo_Contig122.18.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig122 1461971..1462966 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig122.18.1

>prot_H-akashiwo_Contig122.18.1 ID=prot_H-akashiwo_Contig122.18.1|Name=mRNA_H-akashiwo_Contig122.18.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=332bp
MDEFIIFYNPKQRRRVVDVAEHLGVAPATVQSYIKKGMIKRSKTWVSPNL
TTKHKLNRLRFIRPYIDPRATMGGKYFYYDMRSTFHLDEKWFFICRTSEG
YILTPDEKAPRQKVHHKKHISKVMFLCVVARPMLANGRLTDGKVGCWPVG
QLQQQKKVSKNAAAGTWKFVNETIDYEGYKRMVIDRVLPAIRAGCPRSLS
HTANGQPKVLYLQDDGAGAHGKLAEDPEFLAACTAGGFHIQLRRQPSQSP
DLNVLDLGFFNHLQSLTWRRKFFKSPEGLIKAVYRAWLDSPNEALNDVFL
TLQSIMTATSEVGGDNNYKFPHMYKAHRRNRG
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mRNA from alignment at H-akashiwo_Contig122:1461971..1462966-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig122.18.1 ID=mRNA_H-akashiwo_Contig122.18.1|Name=mRNA_H-akashiwo_Contig122.18.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=996bp|location=Sequence derived from alignment at H-akashiwo_Contig122:1461971..1462966- (Heterosigma akashiwo CCMP452)
ATGGATGAATTCATTATCTTCTATAATCCAAAGCAGAGGAGGCGTGTCGT AGACGTTGCAGAGCATCTGGGTGTTGCACCTGCCACCGTGCAGTCATACA TAAAGAAAGGCATGATCAAGCGCTCCAAGACGTGGGTCTCTCCTAATCTC ACTACCAAGCACAAGCTGAATCGGCTTCGGTTTATTCGGCCCTACATCGA TCCAAGAGCTACTATGGGTGGTAAGTATTTCTACTACGACATGCGTTCCA CTTTCCATCTGGATGAAAAGTGGTTCTTCATTTGCCGGACCAGCGAAGGC TACATCCTGACTCCTGACGAAAAAGCTCCTCGGCAGAAGGTTCATCACAA AAAACACATTTCCAAAGTCATGTTTTTGTGCGTGGTGGCTCGCCCCATGT TGGCAAACGGTAGATTGACGGACGGCAAGGTGGGCTGCTGGCCTGTTGGC CAGCTGCAGCAGCAGAAAAAGGTCTCGAAGAATGCTGCAGCAGGTACTTG GAAGTTTGTGAACGAAACCATTGACTACGAGGGCTACAAGCGAATGGTGA TCGATAGAGTCCTTCCGGCTATTCGGGCAGGTTGCCCTCGGTCTCTTTCC CACACTGCCAATGGTCAGCCGAAAGTTCTGTACCTCCAGGACGACGGTGC TGGTGCACATGGCAAACTTGCTGAGGATCCGGAGTTCTTGGCTGCCTGCA CTGCTGGTGGCTTCCATATCCAGCTCCGTCGCCAACCATCACAGAGCCCT GATCTGAATGTCTTGGATTTGGGCTTCTTCAACCACCTGCAGTCTCTGAC CTGGAGGAGAAAATTTTTCAAGAGCCCTGAAGGCCTCATCAAGGCTGTTT ACAGGGCCTGGCTGGACTCTCCCAATGAGGCCCTGAACGATGTTTTCCTG ACTCTCCAATCCATCATGACAGCCACCAGTGAAGTTGGTGGTGACAACAA CTACAAATTCCCTCACATGTACAAAGCCCACCGCAGGAACAGGGGT
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Coding sequence (CDS) from alignment at H-akashiwo_Contig122:1461971..1462966-

>mRNA_H-akashiwo_Contig122.18.1 ID=mRNA_H-akashiwo_Contig122.18.1|Name=mRNA_H-akashiwo_Contig122.18.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=996bp|location=Sequence derived from alignment at H-akashiwo_Contig122:1461971..1462966- (Heterosigma akashiwo CCMP452)
ATGGATGAATTCATTATCTTCTATAATCCAAAGCAGAGGAGGCGTGTCGT
AGACGTTGCAGAGCATCTGGGTGTTGCACCTGCCACCGTGCAGTCATACA
TAAAGAAAGGCATGATCAAGCGCTCCAAGACGTGGGTCTCTCCTAATCTC
ACTACCAAGCACAAGCTGAATCGGCTTCGGTTTATTCGGCCCTACATCGA
TCCAAGAGCTACTATGGGTGGTAAGTATTTCTACTACGACATGCGTTCCA
CTTTCCATCTGGATGAAAAGTGGTTCTTCATTTGCCGGACCAGCGAAGGC
TACATCCTGACTCCTGACGAAAAAGCTCCTCGGCAGAAGGTTCATCACAA
AAAACACATTTCCAAAGTCATGTTTTTGTGCGTGGTGGCTCGCCCCATGT
TGGCAAACGGTAGATTGACGGACGGCAAGGTGGGCTGCTGGCCTGTTGGC
CAGCTGCAGCAGCAGAAAAAGGTCTCGAAGAATGCTGCAGCAGGTACTTG
GAAGTTTGTGAACGAAACCATTGACTACGAGGGCTACAAGCGAATGGTGA
TCGATAGAGTCCTTCCGGCTATTCGGGCAGGTTGCCCTCGGTCTCTTTCC
CACACTGCCAATGGTCAGCCGAAAGTTCTGTACCTCCAGGACGACGGTGC
TGGTGCACATGGCAAACTTGCTGAGGATCCGGAGTTCTTGGCTGCCTGCA
CTGCTGGTGGCTTCCATATCCAGCTCCGTCGCCAACCATCACAGAGCCCT
GATCTGAATGTCTTGGATTTGGGCTTCTTCAACCACCTGCAGTCTCTGAC
CTGGAGGAGAAAATTTTTCAAGAGCCCTGAAGGCCTCATCAAGGCTGTTT
ACAGGGCCTGGCTGGACTCTCCCAATGAGGCCCTGAACGATGTTTTCCTG
ACTCTCCAATCCATCATGACAGCCACCAGTGAAGTTGGTGGTGACAACAA
CTACAAATTCCCTCACATGTACAAAGCCCACCGCAGGAACAGGGGT
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