mRNA_H-akashiwo_Contig837.1.1 (mRNA) Heterosigma akashiwo CCMP452

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-akashiwo_Contig837.1.1
Unique NamemRNA_H-akashiwo_Contig837.1.1
TypemRNA
OrganismHeterosigma akashiwo CCMP452 (Heterosigma akashiwo CCMP452)
Homology
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: A0A6V1Q9E6_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q9E6_HETAK)

HSP 1 Score: 338 bits (868), Expect = 8.490e-109
Identity = 181/362 (50.00%), Postives = 239/362 (66.02%), Query Frame = 2
Query:  164 SVGPLMSAVPDTDEQLDYFTRT---DIYKENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWNAWVGGELPNVAAPDASLPI--LQAPSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTALLGPEEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDGIEGSCKEMLANDI 1234
            S   LM + P    ++ + +     D YKE +R  +R+V+ H +WRRHRSS+RY RNL T  +S + + L  ++ +V  VATFI  +NA +G         D  + I  L    LPF++   +L LLL FRTN+AY+RW EAR +WG TI RC D VR+GL Y     G     E    K + T + I +ARV KGHFRDGP EA  L+ EL  LLG EEA  + +AAH+PCR++Q LS+ +R A+LT +++Q +D +++ FCD  GA ERIFKTP+PLVYTRHTSRF+ +WLL LP+ALY+ELG     L  +P SA+IA FLLGIEELG+QLEEPFSILP+E M DGIE +C EM+ ND+
Sbjct:   35 STSKLMMSTPAKPAEVSWLSPEFDMDDYKERARVIKRTVYDHEDWRRHRSSKRYLRNLSTLADSEIFRSLRNQLLAVTGVATFIVTYNALIGTGFDT----DFGMHIGKLAVKPLPFSICTGSLSLLLAFRTNDAYSRWAEARKIWGSTIQRCFDLVRSGLTYMEQ--GDMTDEEFANLKKELTLRTIAYARVQKGHFRDGPEEAAILKAELAELLGEEEAERICSAAHKPCRVIQDLSELIRAANLTDMKRQILDNSVAAFCDTVGASERIFKTPVPLVYTRHTSRFMSLWLLLLPMALYRELGTVSDQLLTIPTSAIIAFFLLGIEELGIQLEEPFSILPLEAMCDGIERTCLEMMYNDL 390          
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: B8C0D9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0D9_THAPS)

HSP 1 Score: 262 bits (670), Expect = 3.440e-79
Identity = 158/393 (40.20%), Postives = 223/393 (56.74%), Query Frame = 2
Query:   59 LVVVALVVLSSTFLVSAFQGNNVGRSLQITSSKTTSVGPLMSAVPDTDEQLDYFTRTDIYKENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWNAWVGG--ELPNV--AAPDASLPILQAPSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTALLGPEEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDGIEGSCKEMLA 1225
            L  + L+ LSS  + +    ++    + +  S TTS   L    P TD  L     ++ Y E SR +RR+V+ H EW +HRSS+R+A+NL +   SGV + L  EV +  +VA+ I  WN   GG  +   V   A  + LP L  P  PFTL  P+LGLLLVFRTN++Y RW EAR +WG  IN  RD  R    +Y  +N   +  +      Q +     F R +K H      + E    EL A + PE+A  +++AAHRP R +  LS  +    +  +++ +I+KNLS F D  G  ER+  +P+PL YTRHT+RFL  WLL LPLA+Y+    S+ H+A +PA+AL + FL GI+EL  QLEEPF+ILPM+   D I G C E+++
Sbjct:    7 LSTLLLLALSSPQISAFAPLSSTSTPINVAPSTTTSTTNLQMGPPKTDIVL-----SETYGEGSRKYRRTVYTHNEWVKHRSSDRFAKNLFSMVNSGVYKSLAKEVFATTAVASAIVAWNGIAGGYTDFNGVEHGAIMSFLPQLVLPLTPFTLLSPSLGLLLVFRTNSSYGRWDEARKMWGLNINHTRDLNRMATAWYGHDNQIIDPAKRAEDLRQVSLYTWAFVRSMKRHLSPPSEDEEAFVEELYARMAPEQAEAIISAAHRPNRALYDLSVVIDKLPMHFMRKNEINKNLSIFEDTLGGCERLLSSPVPLFYTRHTARFLSTWLLLLPLAMYQPFSGSWNHVAMIPATALTSVFLFGIDELSTQLEEPFTILPMQGFCDKIGGWCDEIVS 394          
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: A0A7S0RIG3_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RIG3_9CHLO)

HSP 1 Score: 259 bits (663), Expect = 3.080e-78
Identity = 155/354 (43.79%), Postives = 204/354 (57.63%), Query Frame = 2
Query:  212 DYFTRTDIY----KENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWNAW-VGGELPNVAAPDASLPILQAPSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTALLGPEEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDGIEG---SCKEMLANDIAMSTP 1249
            D  T  D Y    +E SR FRR+V+G PEWRRHRS  RY R+L T F S +++GL+  V +    A  +CL N + V  +L     P A    L+ P  PFTL  PAL LLLVFRTN +Y RWWEAR +WG  +NR RDF+R G+ +++         E  A K Q     I FA  LK H R      E +R EL  +L PEE    +   H P  I+++LSQ V +A L+P+   Q+D+N++ F D  G  ERI KTPIPL YTRHTSRFL+ WLL LP+ALY + G     L  +PA   +   L+GIE++GVQ+EEPFS+L  E +   ++    S  +M A D  +  P
Sbjct:   62 DELTGWDAYDFDVREKSRKFRRNVYGPPEWRRHRSVNRYTRHLGTMFTSSIVKGLIPPVAACTLAALAVCLTNEYGVDADL----IPQA----LKLPMEPFTLSAPALSLLLVFRTNASYGRWWEARKIWGGLLNRSRDFIRQGVTWFD--------DEDEALKAQLVRYTIAFAFSLKVHLRGD----EVMRDELKDILTPEELEMALDNVHVPNHILRVLSQIVAEARLSPMMTTQMDENITFFHDVLGKCERILKTPIPLSYTRHTSRFLFAWLLLLPIALYDKCG-----LLTIPAEVFVCLALMGIEDIGVQIEEPFSVLSCEAICGSVQANTTSVLDMQARDEGLIKP 390          
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: A0A7S0WQL1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WQL1_9CHLO)

HSP 1 Score: 256 bits (655), Expect = 6.700e-77
Identity = 157/387 (40.57%), Postives = 216/387 (55.81%), Query Frame = 2
Query:   98 LVSAFQGNNVGRSLQITSSKTTSVGPLMSAVPDTDEQLDYFTRTDIYKENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWNAWVGGELPNVAAPDASLPILQAPSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTALLGPEEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDGIEG---SCKEMLANDIAMSTP 1249
            L+ +   + VG + ++ ++  T+  P + A+    E L +        E  R  RR V+G PEWR+HRS  RYARNL+T F SGV++GLL         A  IC  NA+   E+   A        L  P  PF+L   AL LLLVFRTN++Y+RWWEAR +WG  +NR RDFVR GL +++  +         + K Q     + FA  LK H R    + EK    LT +L PEE    +A  H P  I+++++  VR A+L PIQ  Q+D+N++ F D  G  ERI KTPIPL YTRHTSRFL+ WLL LP+ALY + G     L  +PA   +   L+GIE++GVQ+EEPFS+L  E +   ++    S  +M A D  +  P
Sbjct:   43 LLRSRAASRVGPARRMVTTTATATDPKVDAI--NVENLLWVESLAAEMEEVRENRRVVYGQPEWRKHRSGARYARNLQTFFVSGVLKGLLPATALCTLFAAGICGVNAYQA-EMGEAA--------LTVPMTPFSLSTSALSLLLVFRTNSSYDRWWEARKIWGGLLNRSRDFVRQGLSWFDEEDN--------SLKAQLVRYTVAFAYSLKVHLRSDTEDMEKA---LTPILKPEELEAALANVHVPNHILRVIAGIVRKANLDPIQTTQMDENITFFHDVLGKCERILKTPIPLSYTRHTSRFLFAWLLLLPIALYDKCG-----LLTIPAEVFVCLALMGIEDIGVQIEEPFSVLSCEAICGSVQANTTSVLDMQARDEGLIKP 402          
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: A0A7S3X930_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3X930_9SPIT)

HSP 1 Score: 259 bits (661), Expect = 2.650e-76
Identity = 159/373 (42.63%), Postives = 225/373 (60.32%), Query Frame = 2
Query:  191 PDTDEQLDYFTRTD--IYKENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWN-AWVGGELPNVAAPDASL---PILQA------PSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTAL-----LGPEEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDG-IEGSCKEMLAN--DIAMSTP 1249
            PD D +L  + R     Y E SR +RR+V+ H EW +HRSSER+ RNL++  +SGV + L +E+G + + A F  L N A VG +  +    ++ L   PIL        P+  F++G+PAL LLLVFRTN AY+RW EAR LWG  +N CR+ VR       AN  + NTP+    K         FA+ L+   R GP +    R EL  L     +  E+ +  MAA +RP  ++  +S  +R A++ PI + +ID ++S   D  GA ER+FK+P+PLVYTRHTSRFL  +L+ LP  ++  +GDS+ H A VPA+ +IA FLLGIEE+G+Q+EEPFSILP+E + +G I  +  E+LA+  D + S P
Sbjct:   88 PDADNELGTWYRRSGSEYAEESRQYRRTVYMHDEWVKHRSSERFIRNLRSIGDSGVGKALGMELGFITATAVFCVLINMALVGYQDFDGVFHESMLHTMPILHTIKSVALPNFAFSIGMPALSLLLVFRTNTAYSRWNEARTLWGGVVNNCRNVVRQ------ANVFFPNTPQDETLKDCLAANTAAFAKALRNFLR-GPTDDGIFRSELMELVSMGHMSVEQVDACMAAKNRPMFMLNAMSDALRKANVDPIDRSRIDSSISTLVDLTGACERVFKSPVPLVYTRHTSRFLATFLIFLPFGIWPVMGDSWNHWATVPATDVIAFFLLGIEEIGIQIEEPFSILPLEALCNGAIAATIDELLASKRDPSFSVP 453          
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: A0A7S0LCF6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LCF6_9EUKA)

HSP 1 Score: 253 bits (647), Expect = 6.620e-75
Identity = 164/418 (39.23%), Postives = 233/418 (55.74%), Query Frame = 2
Query:   56 RLVVVALVVLSSTFLVSAFQGNNVGRSLQ-------ITSSKTTSVGPLMS--AVPDTDEQLD------YFTRTDIYKENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWNAWVGG--ELPNVAAPDASLPI------LQAPSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTALLGPE-----EANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDG-IEGSCKEML 1222
            ++++V  VV S+ FL        VG SL        ++ ++  S  P +    VPD +E  D      +F +   Y E SR +RR+V+ H EW +HRS+ER+ +NL+T   SGV + L +E+G V   A F    N  + G  ++   A P     I      +  P+LPFT+ +PAL LLLVFRTN AY RW EAR LWG  IN CR+ VR    Y+       +TP     K +       F++ L+   R GPA+   L  EL  L+  E     +A   M A +RP   +  ++  VR+  L  + + +ID+++S   D  GA ERIFK+P+PLVYTRHTSRFL ++L+ LP  L+  +G S+ H   VPAS +IA FLLGIEE+G+Q+EEPFS+LP+E   +G I  + +EML
Sbjct:    6 KMLLVTAVVSSAAFLAPLSPSLRVGASLAPPAPRTLLSMTEADSNQPCVDEICVPDLEEPQDNYQDVPWFRKGSAYSEESRKYRRTVYMHDEWVKHRSNERFIKNLQTIGASGVKKTLDVELGFVTGTAIFCVAINMLLAGYRDISGAAQPALLEAIGKYTGPISLPTLPFTVCMPALSLLLVFRTNTAYARWNEARTLWGGVINSCRNVVRQANLYF------PDTPAGEDGKDRIAANTAAFSKALRNFLR-GPADDMTLLSELMELVSAELITQRQAEACMEAKNRPMFCLSAMTSNVRELRLESMDRARIDQSISTLVDLTGACERIFKSPVPLVYTRHTSRFLTVFLIFLPFGLWPAMGSSWNHWLTVPASDIIAFFLLGIEEIGIQIEEPFSVLPLEAFCNGAIAATMEEML 416          
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: C1MVS4_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MVS4_MICPC)

HSP 1 Score: 250 bits (639), Expect = 1.190e-74
Identity = 146/353 (41.36%), Postives = 206/353 (58.36%), Query Frame = 2
Query:  185 AVPDTDE-------QLDYFTRTDI-YKENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWNAWVGGELP-NVAAPDASLP------ILQAPSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTALLGPEEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDGI 1198
            AVPD D         L   T  D+ Y E SR +RR+V+ H +W  HRSS R   NL  T  SGV++ LL EV +V ++ATF C WNA + G +     A D   P      ++Q P+LPFTL  PALGLLLVFRTN +Y RW E+R+ WG  ++ CR+ +R    + N +      P ++A   +   +   F R L  H   GP +   L  EL   LG ++A  ++ A +RP + +  LS  + +  +   ++ ++DK++    DA    ERIF +P+PLVYTRHT+RFL  WLL LPLAL++  G S+ H+A +P++ L+A F  GIEEL VQLEEPFSILP++ + D +
Sbjct:   37 AVPDPDSLSPTCALPLRIDTDGDLPYSEASRRYRRTVYRHDDWLTHRSSTRLFGNLSGTLTSGVVRSLLTEVAAVATIATFTCAWNASLLGPVDFRDVARDPLFPTLPRFLLMQLPALPFTLASPALGLLLVFRTNASYARWVESRVAWGRVVSHCRNVMRQSSLWLNVD----REPFVVAGSPELRGKAWAFPRCLASHV-SGPEDEVALARELRLRLGEKDAARLLTAPNRPLQALADLSYCMNNLPIDEKRRVEMDKSIILLGDALETCERIFTSPVPLVYTRHTARFLSFWLLLLPLALWEPFGSSWNHVAMIPSATLVAIFFFGIEELAVQLEEPFSILPLKRLCDNV 384          
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: A0A7S3ALR5_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ALR5_9EUKA)

HSP 1 Score: 249 bits (636), Expect = 2.210e-74
Identity = 152/363 (41.87%), Postives = 215/363 (59.23%), Query Frame = 2
Query:  194 DTD---EQLDYFTRTDIYKENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWNA-WVGGE-LPNVA--AP----DASLPILQAPSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTALLGP-----EEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDGIEGSCKEMLANDI 1234
            DTD   +++ ++ +T  Y E  R  RR++F H +W RHRSSER+ RNLKT   SG+ Q L  E+  V + A F+ ++N  +VG E L  ++   P    DA +  L  P+LPF++ +PAL LLLVFRTN AY+RW EAR LWG  IN CR+ VR        N  + +       K +       F + L+   R GP++   LRGEL  L+        +A+  M A +R    +  +S T+R AD+ P+   +ID+ +S   D  GA ERIFK+PIPLVYTR  SRFL  +LL LPLAL+ +L +S+ H A +PA  LI+ FL GIEE+G+Q+EEPFS+LP+E   +G  G+  E + + +
Sbjct:   25 DTDSGYKRVPWWEQTSSYSETQRKDRRTIFMHDDWVRHRSSERFLRNLKTLGSSGINQALSKELAFVTAAAVFVVVFNMLFVGYEDLSGISHVGPLNFLDADIKTLSLPALPFSIAMPALSLLLVFRTNTAYSRWNEARTLWGGLINNCRNVVRQ------TNTFFPDDARHNILKRRMAADTAAFCKSLRNFLR-GPSDDGMLRGELYELVDAGVMTRAQADDTMRAGNRAMFCLSAMSATLRKADIDPMHSARIDQTISTLVDLTGANERIFKSPIPLVYTRLLSRFLSFFLLLLPLALWPQLSESWNHWATIPAELLISFFLFGIEEVGIQVEEPFSVLPLESFCNGAIGATSEEMLSAV 380          
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: A0A7S2D7Q4_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D7Q4_9STRA)

HSP 1 Score: 249 bits (635), Expect = 5.830e-74
Identity = 152/360 (42.22%), Postives = 212/360 (58.89%), Query Frame = 2
Query:  191 PDTDEQLDYFTRTDIYK--ENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWNAWVGG--ELPNVAAP------DASLPILQAPSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTAL-----LGPEEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDG-IEGSCKEML 1222
            PD +   D  +  D Y   E SR FRR+VF H +W +HRSS+R+  NL +  +SGV Q L  E+ +V   A F  + N  +    +L  ++ P      D++L  +  P+LPFT+ +PAL LLLVFRTN AY RW EAR LWG  IN CR+ VR    ++  ++ +      +A  T       GF R L+   R G  + E LR EL  +     +   +A+  M AA+RP  ++  +S  VR  DL PI + +ID ++S   D  GA ER+FK+P+PLVYTRHT+RFL ++LL LP  L+  LGDS+ H A VP + +IA FL GIEE+G+Q+EEPFS+LP+E   +G I  +  EML
Sbjct:   49 PDLNSAEDPISVGDGYSDAEESRKFRRTVFMHDDWVKHRSSDRFLNNLLSINKSGVKQALSTELQAVTITAVFCVIINMLLFSYQDLSGLSHPGPLSFLDSNLKSISLPALPFTILMPALSLLLVFRTNTAYARWNEARTLWGAIINNCRNVVRQSNTFFPDDDKHWELKRRLAADT------AGFCRALRSFLR-GKTDDETLRAELNEMVDAGDMAQSQADACMNAANRPMFMLSAMSAKVRMTDLHPIDRSRIDASISTLVDLTGANERVFKSPVPLVYTRHTARFLSVFLLLLPFGLWNSLGDSWNHWATVPVTDVIAFFLFGIEEIGIQIEEPFSVLPIEAFCNGAISATNDEML 401          
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Match: A0A7S3U5G5_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3U5G5_9SPIT)

HSP 1 Score: 253 bits (645), Expect = 5.960e-74
Identity = 149/373 (39.95%), Postives = 217/373 (58.18%), Query Frame = 2
Query:  191 PDTDEQLDYFTRTD--IYKENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFESGVIQGLLLEVGSVVSVATFICLWNAWVGG--ELPNVA--------APDASLPILQAPSLPFTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNANNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELT-----ALLGPEEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAFGAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPASALIATFLLGIEELGVQLEEPFSILPMEVMGDG-IEGSCKEMLAN--DIAMSTP 1249
            PD D +L  + R     Y E SR +RR+V+ H EW +HRSSER+ +NL+T+  SGV+Q L +E+  +  ++ F  L N  + G  +   V          P  +L  +  P+LPFT+G+PAL LLLVFR N AY RW EAR LWG  +N CR  VR    Y+  N       +++A  T        FA+ L+   R GP + +  R ELT      L+     +  M A +RP   +  +++ VR AD+ PI + ++D  +S   D  GA ERIFK+P+PLVYTRHTSRFL ++LL +P  L+  +  ++ H   +P +A+++ FLLGIEE+G+Q+EEPFSILP+E + +G I  +  E+LA+  D + S P
Sbjct:   88 PDADNELGTWYRRSGSEYAEESRQYRRTVYMHDEWVKHRSSERFIKNLRTSMRSGVMQALSMELLFMTMMSFFCVLANMLLVGYQDFHGVMHQGPLHGLGPFRALQSVALPALPFTIGMPALSLLLVFRVNTAYARWNEARTLWGGVVNNCRTLVRQANLYFPMNKEAEELKDVLAANT------AAFAKALRNFLR-GPTDDKVFRAELTELVKVGLMSKGHVDACMRAKNRPMFQINAINEAVRKADIHPIDRSRMDTAISTLTDLTGACERIFKSPVPLVYTRHTSRFLTVFLLCMPFGLWPAMSGTWNHWLTIPVTAVLSFFLLGIEEIGIQIEEPFSILPLEALCNGAIAATIDELLASKRDPSFSVP 453          
The following BLAST results are available for this feature:
BLAST of mRNA_H-akashiwo_Contig837.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V1Q9E6_HETAK8.490e-10950.00Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
B8C0D9_THAPS3.440e-7940.20Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S0RIG3_9CHLO3.080e-7843.79Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S0WQL1_9CHLO6.700e-7740.57Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S3X930_9SPIT2.650e-7642.63Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S0LCF6_9EUKA6.620e-7539.23Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
C1MVS4_MICPC1.190e-7441.36Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S3ALR5_9EUKA2.210e-7441.87Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S2D7Q4_9STRA5.830e-7442.22Hypothetical protein n=3 Tax=Dictyocha speculum Ta... [more]
A0A7S3U5G5_9SPIT5.960e-7439.95Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-akashiwo_Contig837contigH-akashiwo_Contig837:92382..96359 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Heterosigma akashiwo CCMP452 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog35128.Thaps4820
PFAMsBestrophin
Model size1536
Max annot lvl2836|Bacillariophyta
KEGG koko:K08994
KEGG TC1.A.46.2
Hectar predicted targeting categorysignal peptide
Exons7
Evalue1.9e-80
EggNOG OGsCOG3781@1|root,2QSQE@2759|Eukaryota,2XAHB@2836|Bacillariophyta
DescriptionBestrophin, RFP-TM, chloride channel
Cds size1215
COG categoryS
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-akashiwo_Contig837.1.1prot_H-akashiwo_Contig837.1.1Heterosigma akashiwo CCMP452polypeptideH-akashiwo_Contig837 92428..96084 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388004.916-UTR-H-akashiwo_Contig837:92381..924271681388004.916-UTR-H-akashiwo_Contig837:92381..92427Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig837 92382..92427 +
1681388004.9989197-UTR-H-akashiwo_Contig837:96084..963591681388004.9989197-UTR-H-akashiwo_Contig837:96084..96359Heterosigma akashiwo CCMP452UTRH-akashiwo_Contig837 96085..96359 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681388004.9269218-CDS-H-akashiwo_Contig837:92427..927281681388004.9269218-CDS-H-akashiwo_Contig837:92427..92728Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig837 92428..92728 +
1681388004.9360964-CDS-H-akashiwo_Contig837:92883..929871681388004.9360964-CDS-H-akashiwo_Contig837:92883..92987Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig837 92884..92987 +
1681388004.9498465-CDS-H-akashiwo_Contig837:93318..934431681388004.9498465-CDS-H-akashiwo_Contig837:93318..93443Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig837 93319..93443 +
1681388004.958606-CDS-H-akashiwo_Contig837:93616..937731681388004.958606-CDS-H-akashiwo_Contig837:93616..93773Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig837 93617..93773 +
1681388004.9699879-CDS-H-akashiwo_Contig837:94115..942381681388004.9699879-CDS-H-akashiwo_Contig837:94115..94238Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig837 94116..94238 +
1681388004.9786325-CDS-H-akashiwo_Contig837:95134..954251681388004.9786325-CDS-H-akashiwo_Contig837:95134..95425Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig837 95135..95425 +
1681388004.9872355-CDS-H-akashiwo_Contig837:95970..960841681388004.9872355-CDS-H-akashiwo_Contig837:95970..96084Heterosigma akashiwo CCMP452CDSH-akashiwo_Contig837 95971..96084 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-akashiwo_Contig837.1.1

>prot_H-akashiwo_Contig837.1.1 ID=prot_H-akashiwo_Contig837.1.1|Name=mRNA_H-akashiwo_Contig837.1.1|organism=Heterosigma akashiwo CCMP452|type=polypeptide|length=405bp
MEFRLVVVALVVLSSTFLVSAFQGNNVGRSLQITSSKTTSVGPLMSAVPD
TDEQLDYFTRTDIYKENSRAFRRSVFGHPEWRRHRSSERYARNLKTTFES
GVIQGLLLEVGSVVSVATFICLWNAWVGGELPNVAAPDASLPILQAPSLP
FTLGVPALGLLLVFRTNNAYNRWWEARILWGFTINRCRDFVRNGLCYYNA
NNGYTNTPEIIAKKTQFTHQVIGFARVLKGHFRDGPAEAEKLRGELTALL
GPEEANYVMAAAHRPCRIVQLLSQTVRDADLTPIQQQQIDKNLSGFCDAF
GAMERIFKTPIPLVYTRHTSRFLYIWLLGLPLALYKELGDSYLHLAAVPA
SALIATFLLGIEELGVQLEEPFSILPMEVMGDGIEGSCKEMLANDIAMST
PVEN*
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mRNA from alignment at H-akashiwo_Contig837:92382..96359+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-akashiwo_Contig837.1.1 ID=mRNA_H-akashiwo_Contig837.1.1|Name=mRNA_H-akashiwo_Contig837.1.1|organism=Heterosigma akashiwo CCMP452|type=mRNA|length=3978bp|location=Sequence derived from alignment at H-akashiwo_Contig837:92382..96359+ (Heterosigma akashiwo CCMP452)
CTTATCCTTCTCTGCTGAAGAAGAGTCCCATAGTCCAAATCAAAACATGG AATTCCGACTTGTAGTCGTGGCCTTGGTGGTGCTCTCCAGCACTTTCCTC GTCTCCGCCTTTCAGGGCAACAATGTAGGCCGTTCCTTGCAGATCACTTC TTCAAAAACGACCAGCGTGGGGCCTTTAATGTCTGCCGTTCCTGATACGG ACGAGCAACTTGACTATTTCACAAGGACCGACATTTACAAGGAGAATTCC AGGGCTTTCCGGAGGAGTGTTTTTGGCCACCCTGAGTGGAGAAGACACCG ATCTTCCGAACGTTACGCAAGAAACCTGAAAACCACTTTCGAATCAGGTG TCATGTATTGCCACCATGAAGCATACATGCATACGCAGGACACAGTTTCA ATGGTTCAAAATTTACGAGGATGATCCAGCCTTGGCACACGGCTTTTTCT TCCATTATTATCCACTAGAAACGTAAAAGTACACCTCTTTTACCACTTGC AGGTGTGATCCAGGGTCTTCTGCTGGAGGTCGGTTCTGTTGTGTCCGTCG CTACATTCATCTGTTTATGGAATGCATGGGTTGGTGGCGAGCTTCCCAAC GTAGCAGTAAGTAAATGTTGATTTGATTGAACTGGGTTTGCTTTCGGACG CTTGTGGCACTTGCTTTTGCGCTCTAATCGCACTGACTTTTCACATACTA CACAAAAATGGTCATGCACATTCAACATTTTCATGCATCAAGCTGACTTT CTGCTTGCTTGCATTTTTCATGGAAACATTTTTACCGCTACGCCTATTCA TGTACAATACCACCCCCGCTACACGGCGACACATTGCAACACCGAACAAA CTCCATAATGAGAAAGACATTTGCTTGAAACACATCGTTTCTGCTCCTGC CATTGTTGTCTGGATTGAACCTCAATCTCTTTTACAGGCACCTGATGCGT CCTTACCCATCCTCCAAGCTCCTTCCCTCCCGTTTACTCTTGGAGTCCCT GCCTTGGGTCTCCTGCTTGTCTTTAGGACCAACAATGCCTACAATAGATG GTGGGAGGCTCGGTAAGTCTACCCCCCCCCCCCCCTCCTCTAATGCTGAA AGGTGAATCCTGACCTCAGTTGCAGCCTCCTCTGGATATGGCTACTACGC ATCTCACCGTGTTTTCTTCCTCTTTCCCCCCGCTAAATGATGTTGATTAT ACTTGGCGGTAATGGTGGCTGGGGGCGGCACACAGGATTCTGTGGGGTTT CACCATCAACCGCTGCCGCGACTTTGTGCGCAATGGTCTGTGCTACTACA ACGCCAATAATGGGTATACCAACACCCCGGAGATCATCGCCAAGAAGACC CAGTTCACCCACCAAGTCATCGGCTTTGCCCGCGTGCTCAAGGTCAGAGC CCCCCCCCCCCCCGCCCGCCCATACATACATGTGTTTAGCACTCCCCATG ATGATGATGATGATTTTAGTTTATTTCAAGTCCACCACTTGGATAACTAC AAGGACCGAAGCCCCGGCCTCCACATGTGGACACTGCCACCACTAGTGCA TAATTATTATACTAAACTATTACTGAGTAGTAATAATATAATAACGTCGG AAGCTGGAGAAGCGTATTATCCACTCCTGCGCAGTAGCAGCGGCAGCTGC AGCAAGAAGCCCCCCCCATACTACTTTCCTTTGTCCCCGCGGCGGGCGGC GGCGGGCGGCGGCGGCGGCGGCGGCGGCGCGCAGGGGCACTTCCGCGACG GGCCGGCCGAGGCGGAGAAGCTGCGCGGGGAGCTCACGGCCCTGCTGGGC CCGGAGGAGGCCAACTACGTGATGGCCGCCGCCCACCGCCCCTGCCGCAT CGTGCAGGTGGGCCGGCCGGGCCCCCTTCGCTTccccccCCCCCCACATC CGCAACCACTGGGAAGGGGCGCTGCCCCGGGGCAGCGAGCGGGCGGGGAG GGGCGCTTGACGACCGAGTGCTCGACGGCAGTCCAGGCATGGGTACAGGC TAGAAGAGGGGAGGAGCAGCACCAAAATAATAAGGGATTTCTGCACCGAT AGCACGTGTCATCACCCAAAGGAGGGTGATTCGCACTGACAGCATGTGTG TCAACAGTTGTGCAGTCTTATTGGTTGTTTGACGCTGGGTTTGATAGTGC AAGAGATTGCTGCTAGGGTATCATCTTAGTGTGGTGGGACACTTGATTAC ATAAAGGTATTTGAGCTTATATACAATCTGCTTCTCCCTTTCCCGACCGT TGGAGCTATCACCAAAAGTAATCATATCTTACACAGAGTCACCAACCTAT CACATACATTGTGCCCGCATGCAACCCACCATCAAGATTGTGATGGATGC AAGAAAACATCCGGCACGCATGCAGGCCCTTGTAAATGCAGGCCTTGCCC TTGTGCACGAGCCCGGTCTTGTTGCTGCGCACTGTGGCTTCAACCTACAC TGAAAGAAAGTCTTTCATTTGGATTTCATGTGGGCTTCCTCTGCCTCCAC TAACAGAAATCACACCTGCGCTGTCCCCGTGAAGAGAAAAAAAAAACAAA AAATTTCTTAGATATACTGGTAGCGTACGAGTATAACTTTTTTATTTAGT ACTACAACTATGTTTCATTATTTTTATCATAGGTGCCGGTTGTGTGTGGA GGGAGGAGCCATGATGGGTTCGTTTTTTTAAGCCGCGAAGAATATTCTAT CATACTGAAAGCTGACCGTTCAccCCCCCCTTCCCCCCCCCCGGCCGGGC CAGTTGCTGAGCCAGACGGTGCGCGACGCCGACTTGACGCCCATCCAGCA GCAGCAGATCGACAAGAACCTCTCCGGGTTCTGCGACGCCTTCGGGGCCA TGGAGCGCATCTTCAAGACGCCCATTCCGCTGGTGTACACGCGGCACACC TCGCGCTTCCTGTACATCTGGCTGCTGGGCCTGCCGCTGGCGCTGTACAA GGAGCTGGGCGACAGCTACCTGCACCTGGCCGCCGTGCCCGCCTCGGCCC TCATCGCCACCTTCCTGCTCGGCATCGAGGAGCTCGGCGTACAGGTGCCG CCCCCCCCCCCCTCGAGGTATTTATAGCCAATCAAACGCATTAAGATTTT ATTTATAGCCAATCAAACACCTTAAGATTTATTTATAGCCAATCAAACGC CAGGCAGCAGTCCCCCCCGGGCTTGGCCCCCTTCCCCTCCCTCCGCCCTC TCGTCGTCCCCCTTTGCCCTCTAAGCTGCCCTGCCGCCCGCTGCCGCCGC CGCTGCTGTTGCCGCCGCTGCCCCTGCGGCTGCTCTCCTTTGAAGAAGAA CTTGGCCCACCCCGCTGTTCTGGTTGTGGTGAAGCAGCTCTCAAAAGACA GGAAATGTAACCGCATTTGATCAGGGAAGAAAGTGTTTTGTTGGTGATAA ATCACAACTATACAACCATGTCTTATATGTGACATACTACTAGTAAGGAG GAAGTATGAAGCCAAAAAATAATAATAAAACGTAATATAACAAATATAAT AATGTACTCCAACAAATACCTGATAAGAGATTCCTCATTCATTGCTGTCT GCATTATGTATCTTCCTTCCATTTTTTTTCTGGCATCAGCTTGAAGAGCC TTTCAGTATCCTGCCAATGGAGGTGATGGGAGATGGTATTGAGGGCAGCT GCAAGGAGATGCTGGCCAATGACATTGCCATGTCTACTCCTGTGGAGAAC TGAGCAAACAAAGAAAAAAGATGGTTGGTTGAGGACTGAGCCTTGACTTG ATGCCTTGTGCGCTTCATTCTTTGTGTTGTTGTTGCCGACCATATTTTTT TTATGCTTGATGGGAGGAAAATGAGGTAGCAGACCAGAAGTGTAGCCAGG CAAGAAATATGATGTAATATACATGATAACTGTACCCAAGGGAGGAGGAG GCCCTGAGATGCAGCTTTTCTTCTCCCCTCACCACCTCTTTTTTTTTTTT CAACTTGATGATGTGGAGGTGCAGTTGC
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Coding sequence (CDS) from alignment at H-akashiwo_Contig837:92382..96359+

>mRNA_H-akashiwo_Contig837.1.1 ID=mRNA_H-akashiwo_Contig837.1.1|Name=mRNA_H-akashiwo_Contig837.1.1|organism=Heterosigma akashiwo CCMP452|type=CDS|length=1215bp|location=Sequence derived from alignment at H-akashiwo_Contig837:92382..96359+ (Heterosigma akashiwo CCMP452)
ATGGAATTCCGACTTGTAGTCGTGGCCTTGGTGGTGCTCTCCAGCACTTT
CCTCGTCTCCGCCTTTCAGGGCAACAATGTAGGCCGTTCCTTGCAGATCA
CTTCTTCAAAAACGACCAGCGTGGGGCCTTTAATGTCTGCCGTTCCTGAT
ACGGACGAGCAACTTGACTATTTCACAAGGACCGACATTTACAAGGAGAA
TTCCAGGGCTTTCCGGAGGAGTGTTTTTGGCCACCCTGAGTGGAGAAGAC
ACCGATCTTCCGAACGTTACGCAAGAAACCTGAAAACCACTTTCGAATCA
GGTGTGATCCAGGGTCTTCTGCTGGAGGTCGGTTCTGTTGTGTCCGTCGC
TACATTCATCTGTTTATGGAATGCATGGGTTGGTGGCGAGCTTCCCAACG
TAGCAGCACCTGATGCGTCCTTACCCATCCTCCAAGCTCCTTCCCTCCCG
TTTACTCTTGGAGTCCCTGCCTTGGGTCTCCTGCTTGTCTTTAGGACCAA
CAATGCCTACAATAGATGGTGGGAGGCTCGGATTCTGTGGGGTTTCACCA
TCAACCGCTGCCGCGACTTTGTGCGCAATGGTCTGTGCTACTACAACGCC
AATAATGGGTATACCAACACCCCGGAGATCATCGCCAAGAAGACCCAGTT
CACCCACCAAGTCATCGGCTTTGCCCGCGTGCTCAAGGGGCACTTCCGCG
ACGGGCCGGCCGAGGCGGAGAAGCTGCGCGGGGAGCTCACGGCCCTGCTG
GGCCCGGAGGAGGCCAACTACGTGATGGCCGCCGCCCACCGCCCCTGCCG
CATCGTGCAGTTGCTGAGCCAGACGGTGCGCGACGCCGACTTGACGCCCA
TCCAGCAGCAGCAGATCGACAAGAACCTCTCCGGGTTCTGCGACGCCTTC
GGGGCCATGGAGCGCATCTTCAAGACGCCCATTCCGCTGGTGTACACGCG
GCACACCTCGCGCTTCCTGTACATCTGGCTGCTGGGCCTGCCGCTGGCGC
TGTACAAGGAGCTGGGCGACAGCTACCTGCACCTGGCCGCCGTGCCCGCC
TCGGCCCTCATCGCCACCTTCCTGCTCGGCATCGAGGAGCTCGGCGTACA
GCTTGAAGAGCCTTTCAGTATCCTGCCAATGGAGGTGATGGGAGATGGTA
TTGAGGGCAGCTGCAAGGAGATGCTGGCCAATGACATTGCCATGTCTACT
CCTGTGGAGAACTGA
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